Changeset 2004


Ignore:
Timestamp:
May 29, 2013, 1:50:53 PM (7 years ago)
Author:
Nicklas Nordborg
Message:

References #422, #423 and #478. Added several bioplate annotation types into categories so that they will be easier to find those that are useful for bioplates of a given bioplate type in the regular BASE interface (assuming that BASE 3.2.3 has been installed; see http://base.thep.lu.se/ticket/1761).

File:
1 edited

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  • extensions/net.sf.basedb.reggie/trunk/src/net/sf/basedb/reggie/servlet/InstallServlet.java

    r2002 r2004  
    324324            Annotationtype.BA_RIN, Annotationtype.CA_RQS, Annotationtype.QC_HISENSE));
    325325
    326         jsonChecks.add(checkAnnotationTypeCategory(dc, Subtype.MRNA, createIfMissing));
    327         jsonChecks.add(checkAnnotationTypeCategory(dc, Subtype.CDNA, createIfMissing));
     326        jsonChecks.add(checkAnnotationTypeCategory(dc, Subtype.MRNA, createIfMissing,
     327          Annotationtype.POOL_SCHEMA, Annotationtype.PLATE_PROCESS_RESULT,
     328          Annotationtype.DILUTION_DATE, Annotationtype.DILUTION_OPERATOR,
     329          Annotationtype.PURIFICATION_DATE, Annotationtype.PURIFICATION_OPERATOR,
     330          Annotationtype.FRAGMENTATION_DATE, Annotationtype.FRAGMENTATION_OPERATOR,
     331          Annotationtype.CLEANUP_DATE, Annotationtype.CLEANUP_OPERATOR));
     332       
     333        jsonChecks.add(checkAnnotationTypeCategory(dc, Subtype.CDNA, createIfMissing,
     334          Annotationtype.SYNTHESIS_DATE, Annotationtype.SYNTHESIS_OPERATOR,
     335          Annotationtype.POOL_SCHEMA, Annotationtype.BARCODE_VARIANT, Annotationtype.PLATE_PROCESS_RESULT));
     336       
    328337        jsonChecks.add(checkAnnotationTypeCategory(dc, Subtype.LIBRARY, createIfMissing,
    329338            Annotationtype.QUBIT_CONC, Annotationtype.QUBIT_CONC_AFTER_SPEEDVAC,
    330339            Annotationtype.CA_SIZE, Annotationtype.CA_MOLARITY,
    331             Annotationtype.FLAG));
     340            Annotationtype.FLAG,
     341            Annotationtype.AMPLIFICATION_DATE, Annotationtype.AMPLIFICATION_OPERATOR,
     342            Annotationtype.CLEANUP_DATE, Annotationtype.CLEANUP_OPERATOR,
     343            Annotationtype.POOL_SCHEMA, Annotationtype.BARCODE_VARIANT, Annotationtype.PLATE_PROCESS_RESULT));
    332344
    333345        jsonChecks.add(checkAnnotationTypeCategory(dc, Subtype.POOLED_LIBRARY, createIfMissing,
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