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Ticket Summary Status Owner Type Priority Milestone
#229 Implement API for additional GenePattern web services assigned Nicklas Nordborg task critical ZZ GenePattern integration v1.0
#1119 Re-implement TIFF to JPG conversion for Histology images using the ImageIO API new Nicklas Nordborg enhancement critical Reggie v4.x
#1133 Re-organize the Reggie front page accepted Nicklas Nordborg enhancement critical Reggie v4.23
#169 Running two "New root bioassay set" jobs at the same time makes the second to finish crash new Jari Häkkinen defect major ZZ Other tickets
#218 Proof-of-concept: run a selected GenePattern module from BASE assigned Nicklas Nordborg task major ZZ GenePattern integration v1.0
#219 Setup a GenePattern server for testing new Nicklas Nordborg task major ZZ GenePattern integration v1.0
#234 Proof-of-concept: run a selected GenePattern visualization module from BASE assigned Nicklas Nordborg task major ZZ GenePattern integration v1.0
#262 Tab2Mage exporter exception: Can't use an unsaved item in query: Annotation set[new] new Jari Häkkinen defect major ZZ Other tickets
#306 Create package for supporting external files on Amazon S3 new Jari Häkkinen Request major ZZ A wish list
#325 Import files from a HDFS directory as external file items new Nicklas Nordborg task major ZZ HDFS package v1.1
#413 Handle re-running a sample on Caliper with Hi-Sense option new Nicklas Nordborg enhancement major Reggie v4.x
#476 Get list of blood samples where at least one RNA extract exists new Nicklas Nordborg task major Reggie v4.x
#510 Consistent use of terms in the lab protocols and Reggie interface new johan enhancement major Reggie v4.x
#584 Make it possible to use different volumes for different RNA in Create mRNA plate wizard new Nicklas Nordborg enhancement major Reggie v4.x
#585 Cluster start date shold be a date+time annotation new Nicklas Nordborg enhancement major Reggie v4.x
#586 Register end date+time for clustering new Nicklas Nordborg enhancement major Reggie v4.x
#588 Update extensions to target Java 1.7 and BASE 3.3 new Jari Häkkinen task major
#695 New reporter annotations new Nicklas Nordborg enhancement major Reggie v4.x
#696 Implement some skin examples for BASE new task major Skin-collection 1.0
#752 Schedule new RNAQC from Flagged RNA wizard new Nicklas Nordborg enhancement major Reggie v4.x
#1116 Switch to JSON.simple 1.1.1-1 new Nicklas Nordborg task major YubiKey v1.6
#1117 Switch to JSON.simple 1.1.1-1 new task major Open Grid Scheduler service v1.3
#1118 Switch to JSON.simple 1.1.1-1 new task major Relax v1.5
#1120 Remove Apache POI from distribution accepted Nicklas Nordborg task major Reggie v4.23
#1123 Map external data to releases should not include case or specimen external id reopened Nicklas Nordborg enhancement major Relax v1.5
#1126 Cohort exporter should support exporting to Excel file new enhancement major Relax v1.5
#1129 DNA pre-normalization accepted Nicklas Nordborg task major Reggie v4.23
#1130 External RNA/DNA import wizard new Nicklas Nordborg task major Reggie v4.23
#1131 Switch to BASE 3.15 accepted Nicklas Nordborg task major Reggie v4.23
#1134 Implement an "Activity log" accepted Nicklas Nordborg task major Reggie v4.23
#919 Include information about deliverd reports in case summary new Nicklas Nordborg enhancement minor Reggie v4.x
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