Custom Query (1108 matches)

Filters
 
Or
 
  
 
Columns

Show under each result:


Results (201 - 300 of 1108)

1 2 3 4 5 6 7 8 9 10 11 12
Ticket Summary Owner Type Priority Milestone Component
#55 update ChangeLog Jari Häkkinen task major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#57 --with-base configure option [default /usr/local/base] Peter Johansson task major se.lu.thep.wenni
#58 --base-plugindir configure option Peter Johansson task major se.lu.thep.wenni
#60 explain how to run wenni (base1 version) against a base_devkit Peter Johansson task major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#62 make check does not work Peter Johansson defect major se.lu.thep.wenni
#63 make distcheck should work Jari Häkkinen enhancement major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#66 The plier and rmaexpress plug-ins should make an graceous exit when the underlying binary is missing Jari Häkkinen defect major se.lu.thep.affymetrix
#67 The plier and rmaexpress plug-ins does not work in a Microsoft enviornment Jari Häkkinen defect major se.lu.thep.affymetrix
#68 Update the documentation to explain what should be done to get the plug-in to work in Microsoft windows Jari Häkkinen task major se.lu.thep.affymetrix
#73 Plier fails to import data Jari Häkkinen enhancement major se.lu.thep.affymetrix
#77 Update information about webservice defect major ZZ Other tickets tracpages
#79 Center on assay (se.lu.onk.Center) olle task major ZZ Other tickets se.lu.onk series plug-ins
#83 ReplicateError: Error in ReplicateError Jari Häkkinen defect major se.lu.onk series plug-ins
#84 Change parameter in ReplicateError (se.lu.onk.ReplicateError) olle enhancement major ZZ Other tickets se.lu.onk series plug-ins
#88 extra values pass through Jari Häkkinen enhancement major ZZ Other tickets se.lu.onk series plug-ins
#91 Import Illumina Bead Summary(IBS) files as raw data Nicklas Nordborg task major Illumina package v1.0 net.sf.basedb.illumina
#94 Import reporter annotations from bgx files Nicklas Nordborg task major Illumina package v1.0 net.sf.basedb.illumina
#95 Intensity calculator for Illumina expression data Jari Häkkinen task major Illumina package v1.1 net.sf.basedb.illumina
#97 Remove Plier support from se.lu.thep.affymetrix Jari Häkkinen task major ZZ Other tickets se.lu.thep.affymetrix
#98 Implement validator and metadata extractor plug-in for BGX files Martin Svensson task major Illumina package v1.0 net.sf.basedb.illumina
#99 The tagging system of the repository should be changed Jari Häkkinen enhancement major tracpages
#102 Intensity calculator for Illumina SNP data Nicklas Nordborg task major Illumina package v1.0 net.sf.basedb.illumina
#104 Add information that BASE2WSClient.jar is needed to compile the plug-ins Jari Häkkinen defect major Illumina package v1.1 net.sf.basedb.illumina
#106 Move the example web services code from the BASE server Nicklas Nordborg task major Web services examples v2.6 net.sf.basedb.examples.webservices
#108 Update information about MEV on the BASE-hacks site Nicklas Nordborg task major MEV Launcher v1.0 net.sf.basedb.mev
#109 Add information to the wiki page on how to give feedback on the Illumina package Nicklas Nordborg task major Illumina package v1.1 net.sf.basedb.illumina
#110 Illumina detection P-value plug-in Jari Häkkinen enhancement major Illumina package v1.1 net.sf.basedb.illumina
#111 Update Illumina wiki pages and related documentation before release Jari Häkkinen task major Illumina package v1.1 net.sf.basedb.illumina
#112 Illumina plug-in installer script fails (in some cases) Martin Svensson defect major Illumina package v1.2 net.sf.basedb.illumina
#113 Add support for more variations of Illumina detection P-value calculations Jari Häkkinen enhancement major Illumina package v1.4 net.sf.basedb.illumina
#115 MeV launch returns a 'jsp' extension not a 'jnlp' Nicklas Nordborg defect major net.sf.basedb.mev
#116 Make the MEV launcher extension aware of bioassaysets that store data in file Nicklas Nordborg enhancement major MEV Launcher v1.1 net.sf.basedb.mev
#117 Create average nomralization plug-in Martin Svensson task major Normalization package v1.0 net.sf.basedb.normalizers
#118 Create qQuantile normalizer (aka cubic-spline normalizer) Jari Häkkinen task major Normalization package v1.1 net.sf.basedb.normalizers
#120 Create a normalization plug-in package. Jari Häkkinen task major Normalization package v1.1 net.sf.basedb.normalizers
#121 BGX-importer should 0-pad Array_Address_ID if the BGX-file doesn't have done that already Martin Svensson enhancement major Illumina package v1.2 net.sf.basedb.illumina
#122 Add wiki-page for Normalization-package Martin Svensson task major Normalization package v1.0 net.sf.basedb.normalizers
#123 Update BasePlug-ins' firstpage Martin Svensson defect major tracpages
#125 MeV ... files are now supported (by the BASEcore) in the BASE analysis tree Nicklas Nordborg enhancement major net.sf.basedb.mev
#126 Illumina SNP ... files are now supported (by the BASEcore) in the BASE analysis tree Nicklas Nordborg enhancement major Illumina package v1.x net.sf.basedb.illumina
#128 Warning when ftp-config.xml is missing Nicklas Nordborg enhancement major net.sf.basedb.ftp
#129 ReplicateError: Create a se.lu.onk.ReplicateError module Jari Häkkinen task major se.lu.onk series plug-ins
#130 Base1PluginExecuter/ReplicateError: errors are not catched properly (se.lu.onk.ReplicateError) Jari Häkkinen defect major ZZ Other tickets se.lu.onk series plug-ins
#131 se.lu.onk.BaseFile should be its own package Jari Häkkinen task major se.lu.onk series plug-ins
#133 ReplicateError: The plug-in adds new entries to the stdout.txt for reporters that had null values in stdin.txt Jari Häkkinen enhancement major onk.lu.se
#134 BaseFile: public void resetDataPosition(BASEFileSection section) positions the file pointer one line too far Jari Häkkinen defect major onk.lu.se
#135 ReplicateError: deprecated functionality is used, get rid of it Jari Häkkinen task major se.lu.onk series plug-ins
#136 ReplicateError: Make version info to propagate automatically during ant package Jari Häkkinen defect major se.lu.onk series plug-ins
#137 Create a se.lu.onk.MergeBioAssay module Jari Häkkinen defect major se.lu.onk series plug-ins
#139 ReplciateError: A few data files are created that are always deleted with the `run` script. Jari Häkkinen enhancement major se.lu.onk series plug-ins
#142 Illumina installer plugin cannot be installed in some cases Martin Svensson defect major Illumina package v1.2 net.sf.basedb.illumina
#143 Illumina plug-in package installer requests wrong permissions Martin Svensson defect major Illumina package v1.2 net.sf.basedb.illumina
#145 GPL3 for WeNNI Jari Häkkinen task major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#146 Change references to lev.thep.lu.se to something more appropriate Jari Häkkinen task major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#148 BASE1 configuration: execname should be set automatically during build Jari Häkkinen enhancement major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#149 Error: The query has already been executed (Illumina detection P-value calculation) Nicklas Nordborg defect major net.sf.basedb.illumina
#152 Setting bindir in configure.ac destroys make distcheck Jari Häkkinen defect major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#154 wenni compiling WeNNI.java requires -encoding option to the compiler Jari Häkkinen task major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#156 Compilation fails in base2 test phase of 'make maintainer-check' Peter Johansson defect major se.lu.thep.wenni 0.7 se.lu.thep.wenni
#157 Create a se.lu.onk.Center module Jari Häkkinen defect major se.lu.onk series plug-ins
#159 Create a se.lu.onk.VirtualArray module Jari Häkkinen task major ZZ Other tickets se.lu.onk series plug-ins
#161 (net.sf.basedb.normalizers) Automatic download of BASE API Martin Svensson enhancement major Normalization package v1.1 net.sf.basedb.normalizers
#164 Improve documentation on how to upgrade the illumina plug-in package Martin Svensson task major Illumina package v1.3 net.sf.basedb.illumina
#165 Create quantile normalizer Jari Häkkinen task major Normalization package v1.0 net.sf.basedb.normalizers
#166 (net.sf.basedb.normalizers) Automatic progression of version to source code using ant Martin Svensson defect major Normalization package v1.1 net.sf.basedb.normalizers
#167 (net.sf.basedb.normalizers) Average normalizer should use geometric mean Jari Häkkinen enhancement major Normalization package v1.0 net.sf.basedb.normalizers
#168 MD5 sum should be automatically generated for a package Martin Svensson task major Normalization package v1.1 net.sf.basedb.normalizers
#170 Result dialouge after batch importing several raw bioassays is somewhat confusing Martin Svensson defect major Illumina package v1.3 net.sf.basedb.illumina
#171 IBS raw data importer should be able to handle floats in some columns Martin Svensson enhancement major Illumina package v1.3 net.sf.basedb.illumina
#173 Remove the float to integer conversions in beadstudio2ibs.pl when ticket:171 is fixed and 1.3 is released Martin Svensson defect major Illumina package v1.3 net.sf.basedb.illumina
#174 Change license to GPL 3 for the illumina package? Martin Svensson enhancement major Illumina package v1.3 net.sf.basedb.illumina
#175 Update the ant script to include contrib directory when creating package. Nicklas Nordborg enhancement major Illumina package v1.3 net.sf.basedb.illumina
#176 Create release document Martin Svensson task major Normalization package v1.1 net.sf.basedb.normalizers
#177 Add information about how to upgrade the normalization package. Martin Svensson task major Normalization package v1.1 net.sf.basedb.normalizers
#179 Add user-configurable option for JVM max memory Nicklas Nordborg task major MEV Launcher v1.1 net.sf.basedb.mev
#180 Overview plot extensions for Illumina expression Martin Svensson task major Illumina package v1.4 net.sf.basedb.illumina
#181 Add MeV+R as a BASE extension? Jari Häkkinen task major ZZ Other tickets not classified
#182 Illumina probes not found message should be documented Martin Svensson task major Illumina package v1.4 net.sf.basedb.illumina
#183 Change result storage of qQuantilNormalizer when BASE bioassay set export is refactored Jari Häkkinen enhancement major Normalization package v1.2 net.sf.basedb.normalizers
#184 qQuantileNormalizer should update progress bar Jari Häkkinen enhancement major Normalization package v1.1 net.sf.basedb.normalizers
#186 qQuantileNormalizer method storeResult must be reimplemented Jari Häkkinen enhancement major Normalization package v1.1 net.sf.basedb.normalizers
#187 qQuantileNormalizer should allow user to select the normaliztion reference assay set Jari Häkkinen enhancement major Normalization package v1.1 net.sf.basedb.normalizers
#189 Add toolbar extension examples Nicklas Nordborg task major Extension examples v1.1 net.sf.basedb.examples.extensions
#190 net.sf.basedb.normalizers: Add target that tries to build qQN if requested Jari Häkkinen task major Normalization package v1.1 net.sf.basedb.normalizers
#191 net.sf.basedb.normalizers: qQN should support standard options ... Jari Häkkinen enhancement major Normalization package v1.1 net.sf.basedb.normalizers
#192 MeV unable to launch appplication ... class not found exception Nicklas Nordborg defect major MEV Launcher v1.2 net.sf.basedb.mev
#193 Use one JNLP file for each pre-signed JAR file Nicklas Nordborg defect major MEV Launcher v1.2 net.sf.basedb.mev
#194 Default export file names should be more unique Nicklas Nordborg enhancement major MEV Launcher v1.3 net.sf.basedb.mev
#195 net.sf.basedb.normalizers: Normalizers should ask user for how to calculate averages Martin Svensson enhancement major Normalization package v1.1 net.sf.basedb.normalizers
#196 Illumina methylation arrays ... Nicklas Nordborg defect major Illumina package v1.x net.sf.basedb.illumina
#197 net.sf.basedb.normalizers: Add abort functionaly to qQuantileNormalizers Jari Häkkinen task major Normalization package v1.1 net.sf.basedb.normalizers
#204 Add option to include all available negative controls in detection P-value calculation Jari Häkkinen enhancement major Illumina package v1.4 net.sf.basedb.illumina
#205 Change link README_PluginDetails to point to tags at next release Jari Häkkinen defect major Illumina package v1.4 net.sf.basedb.illumina
#206 net.sf.basedb.normalizers: Make qQuantileNormalization handle missing values Jari Häkkinen enhancement major Normalization package v1.1 net.sf.basedb.normalizers
#207 Illumina DASL arrays Nicklas Nordborg enhancement major net.sf.basedb.illumina
#208 Revert changeset:1045 when yat bug http://dev.thep.lu.se/yat/ticket/535 is fixed Jari Häkkinen task major Normalization package v1.1 net.sf.basedb.normalizers
#212 Add support for exporting CGH data to MeV Nicklas Nordborg task major MEV Launcher v1.3 net.sf.basedb.mev
#215 BGX reporter importer hangs if the [Controls] section has less than 6 columns Nicklas Nordborg task major Illumina package v1.4 net.sf.basedb.illumina
#223 Add target in build.xml for downloading required GenePattern jar files Nicklas Nordborg task major ZZ GenePattern integration v1.0 net.sf.basedb.genepattern
#224 Add a "Test" button on the GenePattern 'edit server' page Nicklas Nordborg enhancement major ZZ GenePattern integration v1.0 net.sf.basedb.genepattern
1 2 3 4 5 6 7 8 9 10 11 12
Note: See TracQuery for help on using queries.