Timeline


and

Dec 12, 2018: Yesterday

10:30 AM Ticket #1097 (Switch to BASE 3.13.1) closed by nicklas
fixed: (In [5192]) Fixes #1097: Switch to BASE 3.13.1
10:30 AM Changeset [5192] by nicklas
Fixes #1097: Switch to BASE 3.13.1
10:22 AM Ticket #1096 (The "Release importer" plug-in should be moved to project page) closed by nicklas
fixed: (In [5191]) Fixes #1096: The "Release importer" plug-in should be …
10:22 AM Changeset [5191] by nicklas
Fixes #1096: The "Release importer" plug-in should be moved to project page
10:02 AM Ticket #1097 (Switch to BASE 3.13.1) created by nicklas
The changes in [5189] #1095 requires that the Hql.sharedTo() bug has …
9:47 AM Changeset [5190] by nicklas
References #1095: Implement "update" mode for the release importer …
8:35 AM Ticket #1096 (The "Release importer" plug-in should be moved to project page) created by nicklas
The "Release importer" plug-in is currently attached to the list page …
8:17 AM Changeset [5189] by nicklas
References #1095: Implement "update" mode for the release importer …

Dec 11, 2018:

3:32 PM Ticket #1095 (Implement "update" mode for the release importer) created by nicklas
It would be a nice feature to be able to use the release importer to …

Dec 7, 2018:

12:53 PM Ticket #1090 (Introduce FirstReleasedIn annotation) closed by nicklas
fixed
12:53 PM Ticket #1072 (Introduce Lysate item between RNA and Specimen) closed by nicklas
fixed
12:01 PM Ticket #1078 ("Not asked" subtype should be renamed to "NotAsked") closed by nicklas
fixed
11:58 AM Ticket #1085 (Remove the temporary hack for handling FlowThrough names with .f suffix) closed by nicklas
fixed: (In [5188]) Fixes #1085: Remove the temporary hack for handling …
11:58 AM Changeset [5188] by nicklas
Fixes #1085: Remove the temporary hack for handling FlowThrough names …
8:55 AM Ticket #1086 (Changes needed for supporting multiple authentication managers) closed by nicklas
fixed
8:54 AM Ticket #1087 (Changes needed for supporting multiple authentication managers) closed by nicklas
fixed
8:46 AM net.sf.basedb.otp edited by nicklas
Added version 1.2 to the table (diff)
8:44 AM net.sf.basedb.yubikey edited by nicklas
Added version 1.5 to the table (diff)
8:42 AM net.sf.basedb.yubikey/install edited by nicklas
(diff)
8:41 AM net.sf.basedb.otp/install edited by nicklas
(diff)
8:41 AM net.sf.basedb.otp/install edited by nicklas
(diff)
8:40 AM net.sf.basedb.yubikey/install edited by nicklas
Important information before installation that is related to #1086 (diff)
8:37 AM net.sf.basedb.otp/install edited by nicklas
Important information before installation that is related to #1087 (diff)

Dec 6, 2018:

11:24 AM Changeset [5187] by nicklas
References #1087: Changes needed for supporting multiple …
11:23 AM net.sf.basedb.otp/using edited by nicklas
(diff)
11:15 AM net.sf.basedb.otp/install edited by nicklas
Documented new configuration option for #1087 (diff)
11:04 AM Changeset [5186] by nicklas
References #1086: Changes needed for supporting multiple …
9:52 AM net.sf.basedb.yubikey/using edited by nicklas
Added note related to #1086 (diff)
9:49 AM net.sf.basedb.yubikey/install edited by nicklas
Added note related to #1092 (diff)
9:47 AM net.sf.basedb.yubikey/install edited by nicklas
More documentation related to #1086 (diff)
9:37 AM net.sf.basedb.yubikey/install edited by nicklas
Documented new configuration option for #1086 (diff)
9:00 AM Ticket #1094 (The OTP field should not be locked to numbers) closed by nicklas
fixed: (In [5185]) Fixes #1094: The OTP field should not be locked to numbers
9:00 AM Changeset [5185] by nicklas
Fixes #1094: The OTP field should not be locked to numbers
8:52 AM Ticket #1094 (The OTP field should not be locked to numbers) created by nicklas
It seems like the javascript that is checking if a numeric key is …
8:47 AM Changeset [5184] by nicklas
References #1092: Detect configuration changes automatically Added …
8:46 AM Ticket #1093 (Detect configuration changes automatically) closed by nicklas
fixed: (In [5183]) Fixes #1093: Detect configuration changes automatically
8:46 AM Changeset [5183] by nicklas
Fixes #1093: Detect configuration changes automatically
8:21 AM Ticket #1093 (Detect configuration changes automatically) created by nicklas
It would be nice if the OTP plug-in could detect modifications to the …
8:20 AM Ticket #1092 (Detect configuration changes automatically) closed by nicklas
fixed: (In [5182]) Fixes #1092: Detect configuration changes automatically
8:20 AM Changeset [5182] by nicklas
Fixes #1092: Detect configuration changes automatically
8:16 AM Ticket #1092 (Detect configuration changes automatically) created by nicklas
It would be nice if the Yubikey plug-in could detect modifications to …

Dec 5, 2018:

3:58 PM Ticket #1091 (New annotation types in multiple new release version) closed by nicklas
fixed: (In [5181]) Fixes #1091: New annotation types in multiple new release …
3:58 PM Changeset [5181] by nicklas
Fixes #1091: New annotation types in multiple new release version The …
2:08 PM Ticket #1091 (New annotation types in multiple new release version) created by nicklas
When a new annotation type is introduced in a release the importer …
10:59 AM Changeset [5180] by nicklas
References #1090: Introduce FirstReleasedIn? annotation Removed unused …
10:58 AM Changeset [5179] by nicklas
References #1090: Introduce FirstReleasedIn? annotation The …
9:46 AM Changeset [5178] by nicklas
References #1090: Introduce FirstReleasedIn? annotation The release …
9:08 AM Changeset [5177] by nicklas
References #1090: Introduce FirstReleasedIn? annotation Added the …
8:46 AM Changeset [5176] by nicklas
References #1090: Introduce FirstReleasedIn? annotation The …
8:21 AM Ticket #1090 (Introduce FirstReleasedIn annotation) created by nicklas
It would be nice to know in which release an item was first included. …

Dec 4, 2018:

1:46 PM Changeset [5175] by olle
Refs #1029. Plate geometry for 10 x 10 wells added: 1. Java data …
1:46 PM Changeset [5174] by olle
Refs #1029. Updates due to version number change to "1.6.0-dev". …

Dec 3, 2018:

3:56 PM Changeset [5173] by olle
Refs #1029. Updates due to version number change to "1.6.0b1". 1. …
3:52 PM Changeset [5172] by olle
Refs #1029. BASE-line servlet updated to use project standard storage …
3:33 PM Changeset [5171] by olle
Refs #1029. Registration wizard for returned FFPE blocks updated with …
3:16 PM Changeset [5170] by nicklas
References #1081: The release exporter should export more data Added …
1:53 PM Changeset [5169] by olle
Refs #1029. MeLuDI updated by removing configuration variables …
1:27 PM Changeset [5168] by olle
Refs #1029. Updates due to update of BASE version to "3.13.1". 1. …
1:02 PM Changeset [5167] by olle
Refs #1029. Updates due to update of BASE version to "3.13.1". 1. …
12:00 PM Changeset [5166] by nicklas
References #1081: The release exporter should export more data The …
11:59 AM Changeset [5165] by nicklas
References #1081: The release exporter should export more data The …
10:52 AM Changeset [5164] by nicklas
References #1075: Change the release exporter to work with list of …
9:23 AM Ticket #1089 (The Delivery client login should specify which login manager it uses) closed by nicklas
fixed: (In [5163]) Fixes #1089: The Delivery client login should specify …
9:23 AM Changeset [5163] by nicklas
Fixes #1089: The Delivery client login should specify which login …
9:19 AM Ticket #1089 (The Delivery client login should specify which login manager it uses) created by nicklas
This is in preparation for BASE 3.14 and the support for multiple …
8:57 AM Changeset [5162] by olle
Refs #1029. Case summary in section "Statistics and reporting wizards" …

Nov 30, 2018:

1:56 PM Ticket #1088 (Keep Session Alive problems) closed by nicklas
fixed: (In [5161]) Fixes #1088: Keep Session Alive problems The re-login …
1:56 PM Changeset [5161] by nicklas
Fixes #1088: Keep Session Alive problems The re-login dialog is now …
1:53 PM Ticket #1088 (Keep Session Alive problems) created by nicklas
I found a problem with the 'keep-session-alive' functionality in …
1:23 PM Changeset [5160] by olle
Refs #1029. Annotation type LOCALIZATION renamed LOCALISATION, FFPE …
11:29 AM Changeset [5159] by olle
Refs #1029. BASE-line registration from file updated by disabling …
9:31 AM Changeset [5158] by olle
Refs #1029. FFPE block order form wizard: i. Input should be from …
9:05 AM Changeset [5157] by nicklas
References #1087: Changes needed for supporting multiple …
9:03 AM Changeset [5156] by nicklas
References #1086: Changes needed for supporting multiple …

Nov 29, 2018:

11:31 AM Changeset [5155] by olle
Refs #1029. BASE-line registration from file updated for 10x10 blood …

Nov 28, 2018:

2:48 PM Changeset [5154] by olle
Refs #1029. FFPE section order form generation updated to use a yellow …
1:17 PM Changeset [5153] by nicklas
References #1087: Changes needed for supporting multiple …
10:08 AM Changeset [5152] by olle
Refs #1029. BASE-line registration from file updated to use 10x10 …
9:58 AM Changeset [5151] by nicklas
References #1087: Changes needed for supporting multiple …
9:54 AM Changeset [5150] by nicklas
References #1086: Changes needed for supporting multiple …
8:57 AM Changeset [5149] by olle
Refs #1029. BASE-line registration from file updated to support CSV …

Nov 26, 2018:

10:29 AM Changeset [5148] by nicklas
References #1086: Changes needed for supporting multiple …
10:28 AM Changeset [5147] by nicklas
References #1087: Changes needed for supporting multiple …
8:54 AM Changeset [5146] by nicklas
References #1087: Changes needed for supporting multiple …
8:46 AM Changeset [5145] by nicklas
References #1087: Changes needed for supporting multiple …
8:45 AM Changeset [5144] by nicklas
References #1086: Changes needed for supporting multiple …
8:43 AM Changeset [5143] by nicklas
References #1086: Changes needed for supporting multiple …

Nov 23, 2018:

12:51 PM Ticket #1087 (Changes needed for supporting multiple authentication managers) created by nicklas
The OTP extension should be updated so that it works with multiple …
12:50 PM Ticket #1086 (Changes needed for supporting multiple authentication managers) created by nicklas
The Yubikey extension should be updated so that it works with multiple …

Nov 22, 2018:

2:51 PM Ticket #1085 (Remove the temporary hack for handling FlowThrough names with .f suffix) created by nicklas
The production server has been updated so that all FlowThrough items …
1:33 PM Changeset [5142] by nicklas
References #1081: The release exporter should export more data Added …
11:06 AM Changeset [5141] by nicklas
References #1080: Add "Manual" option to the DoNotUse? annotation type …
10:45 AM Changeset [5140] by nicklas
References #1081: The release exporter should export more data Added …
9:17 AM Changeset [5139] by nicklas
References #1075: Change the release exporter to work with list of …
9:03 AM Changeset [5138] by nicklas
References #1081: The release exporter should export more data Added …
8:00 AM Changeset [5137] by olle
Refs #1029. FFPE section registration wizard updated in help text by …
7:47 AM Changeset [5136] by nicklas
References #1081: The release exporter should export more data Added …
7:34 AM Changeset [5135] by olle
Refs #1029. Case summary updated in FFPE block section by adding row …

Nov 21, 2018:

4:12 PM Changeset [5134] by nicklas
References #1074: Add more subtypes Added NoSpecimen subtype.
3:51 PM Changeset [5133] by nicklas
References #1075: Change the release exporter to work with list of …
3:51 PM Changeset [5132] by nicklas
References #1075: Change the release exporter to work with list of …
2:05 PM Changeset [5131] by nicklas
References #1075: Change the release exporter to work with list of …
1:35 PM Changeset [5130] by nicklas
References #1075: Change the release exporter to work with list of …
12:07 PM Changeset [5129] by olle
Refs #1029. Updates due to version number change to "1.6.0-dev". …
12:04 PM Changeset [5128] by olle
Refs #1029. Updates due to version number change to "1.6.0a10". 1. …
11:37 AM Changeset [5127] by olle
Refs #1029. FFPE section order form wizard updated with new button …
10:14 AM Changeset [5126] by olle
Refs #1029. FFPE section (specimen) registration wizard updated to …
9:56 AM Ticket #1084 (DataFileFolder annotation should always set a default value) closed by nicklas
fixed: (In [5125]) Fixes #1084: DataFileFolder? annotation should always set a …
9:56 AM Changeset [5125] by nicklas
Fixes #1084: DataFileFolder? annotation should always set a default value
9:55 AM Ticket #1084 (DataFileFolder annotation should always set a default value) created by nicklas
Existing items that doesn't have a value for DataFilesFolder should …
9:48 AM Changeset [5124] by nicklas
References #1075: Change the release exporter to work with list of …
9:11 AM Changeset [5123] by nicklas
References #1074: Add more subtypes The "NO" subtype should be "No".
9:10 AM Changeset [5122] by nicklas
References #1071: Installation wizard doesn't show error message …
9:08 AM Changeset [5121] by olle
Refs #1029. FFPE section (specimen) registration wizard updated with …
8:15 AM Ticket #1083 (Add mBAF plot column to derived bioassay list) closed by nicklas
fixed: (In [5120]) Fixes #1083: Add mBAF plot column to derived bioassay list …
8:15 AM Changeset [5120] by nicklas
Fixes #1083: Add mBAF plot column to derived bioassay list The …
8:11 AM Ticket #1083 (Add mBAF plot column to derived bioassay list) created by nicklas
The column should be used to display thumbnails of the mBAF plots in …
8:04 AM Changeset [5119] by olle
Refs #1029. FFPE section (specimen) registration wizard updated by …
7:56 AM Ticket #1082 (HaplotypeCaller should not write command line parameters in result file) closed by nicklas
fixed: (In [5118]) Fixes #1082: HaplotypeCaller? should not write command line …
7:56 AM Changeset [5118] by nicklas
Fixes #1082: HaplotypeCaller? should not write command line parameters …
7:41 AM Ticket #1082 (HaplotypeCaller should not write command line parameters in result file) created by nicklas
Just in case the command line contains some sensitive information. …

Nov 20, 2018:

4:09 PM Changeset [5117] by nicklas
References #1081: The release exporter should export more data The …
3:03 PM Changeset [5116] by olle
Refs #1029. FFPE block order form wizard updated to no longer write …
2:13 PM Changeset [5115] by olle
Refs #1029. Case summary updated to support new naming scheme for DNA …
1:42 PM Changeset [5114] by olle
Refs #1029. FFPE section (specimen) registration wizard updated: 1. …
1:06 PM Ticket #1080 (Add "Manual" option to the DoNotUse annotation type) closed by nicklas
fixed: (In [5113]) Fixes #1080: Add "Manual" option to the DoNotUse?
1:06 PM Changeset [5113] by nicklas
Fixes #1080: Add "Manual" option to the DoNotUse? annotation type
1:03 PM Ticket #1079 (The FrozenTissue date importer should ignore lines without date) closed by nicklas
fixed: (In [5112]) Fixes #1079: The FrozenTissue? date importer should ignore …
1:03 PM Changeset [5112] by nicklas
Fixes #1079: The FrozenTissue? date importer should ignore lines …
12:55 PM Ticket #1081 (The release exporter should export more data) created by nicklas
For existing items we should export more annotations/other data: * …
12:54 PM Changeset [5111] by olle
Refs #1029. FFPE section registration wizard prepared for new sample …
12:52 PM Ticket #1080 (Add "Manual" option to the DoNotUse annotation type) created by nicklas
12:51 PM Ticket #1079 (The FrozenTissue date importer should ignore lines without date) created by nicklas
This includes empty lines and lines with only white-space. Seems like …
10:24 AM Changeset [5110] by olle
Refs #1029. Support for showing connected "chained" items in Case …

Nov 19, 2018:

2:35 PM Changeset [5109] by nicklas
References #1074: Add more subtypes Added Retract, No, NotAsked, …
2:22 PM net.sf.basedb.reggie/notes421 edited by nicklas
Added notes about ticket #1078 (diff)
2:06 PM Changeset [5108] by nicklas
References #1078: "Not asked" subtype should be renamed to "NotAsked?" …
1:27 PM Ticket #1078 ("Not asked" subtype should be renamed to "NotAsked") created by nicklas
The change must be made manually by an administrator before updating …
1:25 PM Changeset [5107] by nicklas
References #1075: Change the release exporter to work with list of …
10:58 AM Changeset [5106] by nicklas
References #1075: Change the release exporter to work with list of …
8:30 AM Changeset [5105] by nicklas
References #1075: Change the release exporter to work with list of …

Nov 16, 2018:

2:19 PM Changeset [5104] by nicklas
References #1075: Change the release exporter to work with list of …
12:32 PM Changeset [5103] by nicklas
References #1075: Change the release exporter to work with list of …
9:20 AM Changeset [5102] by nicklas
References #1075: Change the release exporter to work with list of …
8:26 AM Changeset [5101] by nicklas
References #1075: Change the release exporter to work with list of …

Nov 15, 2018:

2:18 PM Changeset [5100] by nicklas
References #1075: Change the release exporter to work with list of …
1:13 PM Changeset [5099] by nicklas
References #1075: Change the release exporter to work with list of …
11:43 AM Changeset [5098] by nicklas
References #1075: Change the release exporter to work with list of …
9:07 AM Changeset [5097] by nicklas
References #1075: Change the release exporter to work with list of …

Nov 14, 2018:

2:52 PM Changeset [5096] by nicklas
References #1075: Change the release exporter to work with list of …
2:35 PM Changeset [5095] by olle
Refs #1029. Updates needed for FFPE blocks in selection menus to show …
2:19 PM Changeset [5094] by olle
Refs #1029. MeLuDI updated with new configuration variables …
1:26 PM Changeset [5093] by olle
Refs #1029. Basic support for Histology and H&E glass items added. The …
12:05 PM Changeset [5092] by olle
Refs #1029. Support for showing connected "chained" items in Case …
10:46 AM Changeset [5091] by nicklas
References #1075: Change the release exporter to work with list of …
9:22 AM Changeset [5090] by nicklas
References #1075: Change the release exporter to work with list of …
8:15 AM Changeset [5089] by nicklas
References #1075: Change the release exporter to work with list of …

Nov 13, 2018:

3:58 PM net.sf.basedb.reggie/notes421 created by nicklas
Adding update notes for Reggie 4.21
3:39 PM Ticket #1077 (All biosource items should have an external id (release id)) closed by nicklas
fixed: (In [5088]) Fixes #1077: All biosource items should have an external …
3:39 PM Changeset [5088] by nicklas
Fixes #1077: All biosource items should have an external id (release …
2:20 PM Ticket #1077 (All biosource items should have an external id (release id)) created by nicklas
Currently, among the Biosource item types it is only Patient items …
1:25 PM Ticket #1076 (The Level 3 export plug-in should generate rsync script with -L option) closed by nicklas
fixed: (In [5087]) Fixes #1076: The Level 3 export plug-in should generate …
1:25 PM Changeset [5087] by nicklas
Fixes #1076: The Level 3 export plug-in should generate rsync script …
1:12 PM Ticket #1076 (The Level 3 export plug-in should generate rsync script with -L option) created by nicklas
The current script only has -l option (implicit via -a) which …
10:22 AM Ticket #1075 (Change the release exporter to work with list of patients) created by nicklas
The current release exporter plug-in works with a list of raw …
10:17 AM Ticket #1074 (Add more subtypes) created by nicklas
The next release will start from the patient side and include other …
Note: See TracTimeline for information about the timeline view.