Timeline



Feb 26, 2008:

6:35 PM Changeset [596] by Jari Häkkinen
Removing obsolete member function declarations.
6:34 PM Changeset [595] by Jari Häkkinen
test should be the last directory visited for 'make'
3:24 PM Changeset [594] by Jari Häkkinen
Improved memory usage of BaseFileConverter?. Previous implementation …
3:14 PM Changeset [593] by Jari Häkkinen
Clarified that absolute path needed fof configure.

Feb 21, 2008:

4:44 PM Changeset [592] by Martin Svensson
References #101. Started on the plugin. A commit for the weekend.
11:40 AM Changeset [591] by Martin Svensson
References #93 Correct some comments and removed debug-code
11:36 AM Changeset [590] by Martin Svensson
References #93 You can now validate and extract meta-data from …

Feb 20, 2008:

3:49 PM Changeset [589] by Martin Svensson
References #100 Installation is now including SNP platform-variant and …
11:02 AM Ticket #91 (Import Illumina Bead Summary(IBS) files as raw data) closed by Nicklas Nordborg
fixed: (In [588]) Fixes #91: Import Illumina Bead Summary(IBS) files as raw data
11:02 AM Changeset [588] by Nicklas Nordborg
Fixes #91: Import Illumina Bead Summary(IBS) files as raw data
9:58 AM Ticket #102 (Intensity calculator for Illumina SNP data) created by Nicklas Nordborg
Since the raw data is stored in files, this plug-in needs to extract …
9:52 AM Ticket #101 (Import plug-in for SNP raw data) created by Nicklas Nordborg
SNP data comes from BeadStudio? with one file that contains several …
9:45 AM Ticket #100 (Add Illumina SNP platform to the installation program) created by Nicklas Nordborg
We now have a bit more information about the Illumina SNP platform. It …

Feb 18, 2008:

1:36 PM Changeset [587] by Martin Svensson
References #89 Correct the name of the plug-in
11:26 AM Changeset [586] by Nicklas Nordborg
References #94: Import reporter annotations from bgx files Added …

Feb 13, 2008:

9:54 AM Changeset [585] by Nicklas Nordborg
References #89: Installation program and documentation Updated …

Feb 12, 2008:

11:17 AM net.sf.basedb.illumina edited by Nicklas Nordborg
(diff)
9:46 AM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) closed by Nicklas Nordborg
fixed: (In [584]) Fixes #98: Implement validator and metadata extractor …
9:46 AM Changeset [584] by Nicklas Nordborg
Fixes #98: Implement validator and metadata extractor plug-in for BGX files
9:40 AM Changeset [583] by Nicklas Nordborg
References #89: Installation program and documentation Minor changes …

Feb 11, 2008:

3:35 PM Changeset [582] by Nicklas Nordborg
Removed unused imports
3:14 PM Changeset [581] by Nicklas Nordborg
References #90: Create array design from a bgx-file Fixed missing …
2:50 PM Changeset [580] by Nicklas Nordborg
References #89: Installation program and documentation Added 'Getting …
2:46 PM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) reopened by Nicklas Nordborg
The metadata extractor only extracts the number of controls, not the …

Feb 8, 2008:

2:52 PM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) closed by Martin Svensson
fixed: (In [579]) Fixes #98 Implement validator and metadata extractor …
2:52 PM Changeset [579] by Martin Svensson
Fixes #98 Implement validator and metadata extractor plug-in for BGX files
2:21 PM Changeset [578] by Martin Svensson
Fixes #90 Create array design from a bgx-file.
2:21 PM Ticket #90 (Create array design from a bgx-file) closed by Martin Svensson
fixed: (In [578]) Fixes #90 Create array design from a bgx-file.
1:33 PM Changeset [577] by Martin Svensson
References #89 Installation plug-in is now able to create Illumina …

Feb 7, 2008:

4:43 PM Changeset [576] by Martin Svensson
References #89 Changed to wiki format and configured some svn properties
2:19 PM Changeset [575] by Martin Svensson
Reference #94 Added more extended properties for Illumina reporters …
10:14 AM Ticket #99 (The tagging system of the repository should be changed) created by Jari Häkkinen
Jari has the details in his head, contact him on this issue.
9:54 AM Changeset [574] by Jari Häkkinen
Added information on how to resolve missing probe set situations.

Feb 6, 2008:

4:47 PM Changeset [573] by Martin Svensson
References #89 Added extended properties to be used with Illumina in BASE.
3:46 PM Changeset [572] by Martin Svensson
References #89 Change names, ids and variables according to …
11:28 AM Changeset [571] by Martin Svensson
References #89 Updated svn-properties for README file
11:22 AM Changeset [570] by Martin Svensson
References #89 Inserted the readme-text in wiki format.

Feb 5, 2008:

8:40 PM net.sf.basedb.illumina edited by markus
(diff)
5:13 PM se.lu.thep.affymetrix edited by Jari Häkkinen
APT plug-in location changed. (diff)
5:11 PM PluginDownload edited by Jari Häkkinen
APT plug-in location changed. (diff)
4:51 PM Changeset [569] by Martin Svensson
References #98 The validator and meta data reader is done. The …
12:27 PM Changeset [568] by Nicklas Nordborg
References #91: Import Illumina scandata files as raw data Call …

Feb 1, 2008:

4:45 PM Changeset [567] by Martin Svensson
References #98 A start of a BGX validator/metadatareader.
10:59 AM Changeset [566] by Nicklas Nordborg
References #89: Installation program and documentation Added rest of …

Jan 31, 2008:

4:48 PM Changeset [565] by Martin Svensson
References #90 Added a default plugin configuration to come along with …
3:01 PM Changeset [564] by Nicklas Nordborg
References #91: Import Illumina scandata files as raw data Error …
9:14 AM Ticket #98 (Implement validator and metadata extractor plug-in for BGX files) created by Nicklas Nordborg
It should simply check the [Heading] section in the beginning of the …

Jan 30, 2008:

2:51 PM Changeset [563] by Martin Svensson
References #90 Refine comments and removed some blank lines.
2:46 PM Changeset [562] by Nicklas Nordborg
References #91: Import Illumina scandata files as raw data The …
2:29 PM Changeset [561] by Martin Svensson
References #90 The plug-in can now be used to import features to an …

Jan 29, 2008:

2:53 PM Changeset [560] by Nicklas Nordborg
References #91: Import Illumina scandata files as raw data A skeleton …
8:51 AM Changeset [559] by Nicklas Nordborg
References #94: Import reporter annotations from bgx files The …

Jan 28, 2008:

4:31 PM Changeset [558] by mbayer
have fixed several bugs after testing whole imports, notably a problem …
2:03 PM Changeset [557] by Nicklas Nordborg
References #89: Installation program and documentation Documented the …
1:58 PM Changeset [556] by Nicklas Nordborg
References #94: Import reporter annotations from bgx files First …
11:48 AM Changeset [555] by Martin Svensson
References #89 Added more property checks when an item already exists …
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