Timeline



Apr 29, 2020:

1:44 PM Ticket #1240 (Release exporter changes due to SSP) closed by Nicklas Nordborg
fixed: In 5928: […]
1:44 PM Changeset [5928] by Nicklas Nordborg
Fixes #1240: Release exporter changes due to SSP
9:45 AM Ticket #1240 (Release exporter changes due to SSP) created by Nicklas Nordborg
The SSP analysis (#1239) will add more annotation to StringTie raw …
9:39 AM Changeset [5927] by Nicklas Nordborg
References #1239: Include Single Sample Predictor models in the …
8:30 AM Changeset [5926] by Nicklas Nordborg
References #1239: Include Single Sample Predictor models in the …
8:29 AM Changeset [5925] by Nicklas Nordborg
References #1239: Include Single Sample Predictor models in the …
8:17 AM Changeset [5924] by Nicklas Nordborg
References #1239: Include Single Sample Predictor models in the …

Apr 27, 2020:

1:29 PM Changeset [5923] by Nicklas Nordborg
References #1239: Include Single Sample Predictor models in the …
11:40 AM Changeset [5922] by Nicklas Nordborg
References #1239: Include Single Sample Predictor models in the …
8:13 AM Changeset [5921] by Nicklas Nordborg
References #1239: Include Single Sample Predictor models in the …
7:55 AM Changeset [5920] by Nicklas Nordborg
References #1239: Include Single Sample Predictor models in the …

Apr 24, 2020:

11:07 AM Changeset [5919] by Nicklas Nordborg
References #1234: Implement batch importer for followup blood samples …
8:37 AM Changeset [5918] by Nicklas Nordborg
References #1234: Implement batch importer for followup blood samples …
8:17 AM Ticket #1239 (Include Single Sample Predictor models in the StringTie pipeline) created by Nicklas Nordborg
A plug-in for running Single Sample Predictor (SSP) models was …

Apr 23, 2020:

10:43 AM Changeset [5917] by Nicklas Nordborg
References #1234: Implement batch importer for followup blood samples …

Apr 22, 2020:

1:33 PM Changeset [5916] by Nicklas Nordborg
References #1234: Implement batch importer for followup blood samples …
9:23 AM Changeset [5915] by Nicklas Nordborg
Merge Reggie 4.26.2 to the trunk.
9:21 AM Milestone Reggie v4.26.2 completed
Bug fixes and enhancements for Reggie 4.26.1. Revision Log: …
9:19 AM reggie-4.26.2.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.26.2
9:19 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.26.2 (diff)
9:16 AM Changeset [5914] by Nicklas Nordborg
Tagging Reggie 4.26.2
9:15 AM Changeset [5913] by Nicklas Nordborg
Preparing to release Reggie 4.26.2

Apr 21, 2020:

2:41 PM Ticket #1238 (Convert variants annotations to TEXT type) closed by Nicklas Nordborg
fixed: In 5912: […]
2:41 PM Changeset [5912] by Nicklas Nordborg
Fixes #1238: Convert variants annotations to TEXT type
1:29 PM Ticket #1238 (Convert variants annotations to TEXT type) created by Nicklas Nordborg
The annotation types are currently created with STRING type (see #1229
9:37 AM Changeset [5911] by Nicklas Nordborg
References #1234: Implement batch importer for followup blood samples …

Apr 17, 2020:

8:54 AM Changeset [5910] by Nicklas Nordborg
References #1234: Implement batch importer for followup blood samples …
8:12 AM Changeset [5909] by Nicklas Nordborg
Merge Reggie 4.26.1 to the trunk.
8:06 AM Milestone Reggie v4.26.1 completed
Bug fixes and enhancements for Reggie 4.26. Revision Log: …
8:05 AM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.26.1 (diff)
8:04 AM reggie-4.26.1.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.26.1
8:02 AM Changeset [5908] by Nicklas Nordborg
Tagging Reggie 4.26.1
8:01 AM Changeset [5907] by Nicklas Nordborg
Preparing to release Reggie 4.26.1
7:59 AM Ticket #1236 (Register external sequencing fails) closed by Nicklas Nordborg
fixed: In 5906: […]
7:59 AM Changeset [5906] by Nicklas Nordborg
Fixes #1236: Register external sequencing fails

Apr 16, 2020:

2:50 PM Ticket #1237 (Incrorrect permission for the Register external sequencing wizard) closed by Nicklas Nordborg
fixed: In 5905: […]
2:50 PM Changeset [5905] by Nicklas Nordborg
Fixes #1237: Incrorrect permission for the Register external …
2:11 PM Ticket #1237 (Incrorrect permission for the Register external sequencing wizard) created by Nicklas Nordborg
The specified permission is ExternalSequencing but it should be …
2:07 PM Changeset [5904] by Nicklas Nordborg
Creating bugfix branch for Reggie 4.26
2:00 PM Ticket #1236 (Register external sequencing fails) created by Nicklas Nordborg
[…]

Apr 15, 2020:

1:26 PM Milestone Reggie v4.26 completed
See Reggie extension page for more information.
1:25 PM Changeset [5903] by Nicklas Nordborg
Preparing for future release Reggie 4.27
1:23 PM PluginDownload edited by Nicklas Nordborg
Released Reggie 4.26 (diff)
1:21 PM Tickets #1218,​1232,​1231 batch updated by Nicklas Nordborg
fixed
1:21 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Added link to update notes for Reggie 4.26 (diff)
1:19 PM net.sf.basedb.reggie edited by Nicklas Nordborg
Released Reggie 4.26 (diff)
1:18 PM reggie-4.26.tar.gz attached to net.sf.basedb.reggie by Nicklas Nordborg
Reggie 4.26
1:16 PM net.sf.basedb.reggie/notes426 edited by Nicklas Nordborg
Added note about BASE 3.16 (diff)
1:10 PM Changeset [5902] by Nicklas Nordborg
Tagging Reggie 4.26
1:09 PM Changeset [5901] by Nicklas Nordborg
Preparing to release Reggie 4.26.
1:02 PM Changeset [5900] by Nicklas Nordborg
References #1232: Add support for external sequencing Improve error …
11:26 AM net.sf.basedb.reggie/notes426 edited by Nicklas Nordborg
Added instructions for new pipeline scripts and library preparation … (diff)
9:39 AM Changeset [5899] by Nicklas Nordborg
References #1232: Add support for external sequencing Library …
9:36 AM Changeset [5898] by Nicklas Nordborg
References #1231: Add support for sequencing with NovaSeq? Removed …
9:34 AM Changeset [5897] by Nicklas Nordborg
References #1232: Add support for external sequencing Changed export …

Apr 14, 2020:

9:31 AM Changeset [5896] by Nicklas Nordborg
References #1231: Add support for sequencing with NovaSeq? Updated …
9:30 AM net.sf.basedb.reggie/notes426 created by Nicklas Nordborg
Started to write update instructions for Reggie 4.26
9:00 AM Changeset [5895] by Nicklas Nordborg
References #1232: Add support for external sequencing Display …

Apr 8, 2020:

9:39 AM Ticket #1235 (Improve message when adding more options to an annotation enumeration) closed by Nicklas Nordborg
fixed: In 5894: […]
9:39 AM Changeset [5894] by Nicklas Nordborg
Fixes #1235: Improve message when adding more options to an annotation …
9:34 AM Ticket #1235 (Improve message when adding more options to an annotation enumeration) created by Nicklas Nordborg
The installation wizard will automatically detect and add new options …

Apr 7, 2020:

1:29 PM Changeset [5893] by Nicklas Nordborg
References #1231: Add support for sequencing with NovaSeq? Adding UDI …
11:59 AM Changeset [5892] by Nicklas Nordborg
References #1232: Add support for external sequencing The labels file …
8:25 AM Changeset [5891] by Nicklas Nordborg
References #1232: Add support for external sequencing Export delivery …

Apr 6, 2020:

11:12 AM Changeset [5890] by Nicklas Nordborg
References #1232: Add support for external sequencing Added missing …
11:04 AM Changeset [5889] by Nicklas Nordborg
References #1231 and #1232. Added more columns to the exported sample …

Apr 3, 2020:

9:35 AM Changeset [5888] by Nicklas Nordborg
References #1232: Add support for external sequencing Implemented …

Apr 2, 2020:

10:47 AM Changeset [5887] by Nicklas Nordborg
References #1232: Add support for external sequencing Added a wizard …

Mar 30, 2020:

11:08 AM Changeset [5886] by Nicklas Nordborg
References #1232: Add support for external sequencing Added …
9:05 AM Changeset [5885] by Nicklas Nordborg
References #1231: Add support for sequencing with NovaSeq? Added a …
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