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Rev
Age
Author
Log Message
(edit)
@3330
6 years
Peter
update copyright years
(edit)
@3329
6 years
Peter
new class
CigarIterator?
that can be used to (surprise) iterate over a …
(edit)
@3328
6 years
Peter
avoid temporary variables; prefer initialization. refs
#806
(edit)
@3327
6 years
Peter
redefine Pileup::const_iterator so it avoids reads that do not overlap …
(edit)
@3326
6 years
Peter
use same variable name (p) in docs as in argument list
(edit)
@3325
6 years
Peter
new functions phred and phred_inv that calculate phred scaled …
(edit)
@3324
6 years
Peter
grammar in comment
(edit)
@3323
6 years
Peter
prefer strcmp over generic std::equal
(edit)
@3322
6 years
Peter
change name of test function to more descriptive …
(edit)
@3321
6 years
Peter
fixes bug
#815
(edit)
@3320
6 years
Peter
speedup. assume Distance is symmetric. closes
#814
(edit)
@3319
6 years
Peter
avoid long line
(edit)
@3318
6 years
Peter
closes
#813
(edit)
@3317
6 years
Peter
refs
#806
add test for Pileup class
(edit)
@3316
6 years
Peter
remove trailing ws
(edit)
@3315
6 years
Peter
added inclusion of boost iterator_facade header. refs
#803
.
(edit)
@3314
6 years
Peter
new test class: weighted_iterator_archetype. refs
#803
(edit)
@3313
6 years
Peter
Correct syntax so it works in VPATH build. Correct yat-hello source so …
(edit)
@3312
6 years
Peter
correct lazycheck deps
(edit)
@3311
6 years
Peter
append EXTRA_DIST with some m4 files that were missing in dist (only …
(edit)
@3310
6 years
Peter
a first version of new class Pileup. refs
#806
(edit)
@3309
6 years
Peter
fixes
#811
(edit)
@3308
6 years
Peter
fixed two more glitches in the new version of 'make …
(edit)
@3307
6 years
Peter
bump version to 0.12.2pre
(edit)
@3306
6 years
Peter
merge ptach release 0.12.1 into trunk
(edit)
@3305
6 years
Peter
tagging version 0.12.1
(edit)
@3304
6 years
Peter
Preparing release 0.12.1
(edit)
@3303
6 years
Peter
New macro YAT_FUNC_BAM_CALEND, which checks if function bam_calend is …
(edit)
@3302
6 years
Peter
add test for BamRead::end(). Use samtools' bam_calend if …
(edit)
@3301
6 years
Peter
refs
#810
. minor corrections
(edit)
@3300
6 years
Peter
BAM_CBACK is not #defined in older versions of bam.h. refs
#810
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