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Ticket Summary Status Owner Type Milestone Priority
#92 EnsembleValidator new Peter request yat 0.x+ major
#150 microarray::DataSet new Peter discussion yat 0.x+ major
#175 Extend tests for ensembles new Markus Ringnér request yat 0.x+ major
#181 add a class for SAM new Peter request yat 0.x+ major
#202 utility::matrix has internal support for const matrix views but there is no interface to create a const matrix view new Jari Häkkinen enhancement yat 0.x+ major
#215 weight information in InputRanker new Peter enhancement yat 0.x+ major
#216 PCA is lacking functionality new Jari Häkkinen enhancement yat 0.x+ major
#258 Permutation test new Peter enhancement yat 0.x+ major
#270 Support for different methods to aggregate classifiers in EnsembleBuilder new Markus Ringnér discussion yat 0.x+ major
#296 non-random permutation test new Peter request yat 0.x+ major
#302 allow different normalizations in PCA new Jari Häkkinen enhancement yat 0.x+ major
#346 Generalize NNI to utilize different metrics new Jari Häkkinen enhancement yat 0.x+ major
#357 Function to calculate accuracy new Markus Ringnér request yat 0.x+ major
#364 Histogram cumulative distribution new Peter enhancement yat 0.x+ major
#397 Arithmetic for DataWeight new Jari Häkkinen discussion yat 0.x+ major
#433 predict in regression::Local new Peter enhancement yat 0.x+ major
#605 Add support to the BASE project BFS format new Jari Häkkinen defect yat 0.x+ major
#643 Circular Iterator Adaptor new Jari Häkkinen request yat 0.x+ major
#673 Chromosomes hard-wired in GenomicPosition new Peter discussion yat 0.x+ major
#710 speed up Kendall::score using NlogN algorithm new Peter enhancement yat 0.x+ major
#711 speed up exact p-value for small n in Kendall new Peter enhancement yat 0.x+ major
#773 Weighted version of Binomial LRT new Peter request yat 0.x+ major
#774 iterate bam file over set of regions new Peter discussion yat 0.x+ major
#782 A less memory hungry Aligner new Peter discussion yat 0.x+ major
#798 output sorted bam buffer new Peter request yat 0.x+ major
#825 access Option from Commandline new Jari Häkkinen request yat 0.x+ major
#835 Fast Matrix Transpose new Jari Häkkinen discussion yat 0.x+ major
#854 avoid using non-standard sys/stat.h new Jari Häkkinen discussion yat 0.x+ major
#858 A proxy class between boost::random and GSL RNG reopened Peter request yat 0.18 major
#887 avoid copying in getvector new Jari Häkkinen enhancement yat 0.x+ major
#891 mutable BamReadIterator new Peter discussion yat 0.x+ major
#899 Scheduler::wait_for(int) new Jari Häkkinen request yat 0.x+ major
#900 Job creating jobs new Jari Häkkinen request yat 0.x+ major
#902 split SupervisedClassifer into weighted and non-weighted new Markus Ringnér discussion yat 0.x+ major
#917 undefined reference to symbol 'pthread_condattr_setclock@@GLIBC_2.3.3' new Jari Häkkinen defect yat 0.x+ major
#920 resize VCF::Data new Peter discussion yat 0.x+ major
#923 train interpolation classes outside constructor new Peter discussion yat 0.x+ major
#946 calculate Kendall::score in nlogn time accepted Peter enhancement yat 0.18 major
#950 spurious failures in yat_pc_test.sh new Jari Häkkinen request yat 0.18 major
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