source:
branches/3.3-stable/src/core/net/sf/basedb/core
@
6546
| Name | Size | Rev | Age | Author | Last Change |
|---|---|---|---|---|---|
| ../ | |||||
| authentication | | 6427 | 9 years | References #1599: Convert authentication plug-in system to an … | |
| data | | 6489 | 9 years | Fixes #1814: Add SSH public key or fingerprint field to FileServer? | |
| dbengine | | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| doc-files | | 1538 | 17 years | Implemented delete operation for BioAssaySet?, Transformation and VirtualDb? | |
| dtd | | 6428 | 9 years | References #1599: Convert authentication plug-in system to an … | |
| hibernate | | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| log | | 6510 | 8 years | References #1786: Create one log entry for every changed property … | |
| migrate | | 5896 | 11 years | References #1630: Migrate from MySQL to PostgreSQL Refactored … | |
| plugin | | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| query | | 6545 | 8 years | Fixes #1854: Can't filter or sort on Cufflinks FPKM hi column Added … | |
| signal | | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| snapshot | | 6065 | 11 years | References #1693: Investigate performance of loading annotations from … | |
| templates | | 5476 | 12 years | References #1489: Update to Hibernate 3.6 Changed URL:s to DTD:s used … | |
| xsd | | 6408 | 9 years | References #1712: Implement a 'Content Security Policy' Added … | |
| AbsoluteProgressReporter.java | 1.5 KB | 4517 | 14 years | Addresses #1106. Missed to change reference wherefrom retrive GPLv3 … | |
| AbstractBatcher.java | 5.6 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| AbstractEntityQuery.java | 8.9 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| AbstractHqlQuery.java | 11.2 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| AbstractQuery.java | 23.4 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| AbstractResultList.java | 3.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| AbstractSqlQuery.java | 13.9 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| AccessControlled.java | 2.1 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| AccountExpiredException.java | 1.4 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| AlreadyLoggedInException.java | 1.3 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Annotatable.java | 3.1 KB | 5983 | 11 years | References #1605: Inherit annotations from a child path Added support … | |
| AnnotatableProxy.java | 1.9 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| AnnotatedItem.java | 2.8 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| Annotation.java | 18.2 KB | 6202 | 10 years | References #1729 and #1730. Fixed for the "edit annotations" tab. | |
| AnnotationBetweenRestriction.java | 5.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| AnnotationInRestriction.java | 3.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| AnnotationRestriction.java | 10.0 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| AnnotationSet.java | 33.6 KB | 6420 | 9 years | References #1784: Add support for logging old values Logging of old … | |
| AnnotationSimpleRestriction.java | 10.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| AnnotationType.java | 46.7 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| AnnotationTypeCategory.java | 4.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| AnyToAny.java | 20.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Application.java | 34.7 KB | 6501 | 9 years | References #1823: Extensions overview display incorrect error message … | |
| ArrayBatch.java | 9.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ArrayDesign.java | 24.6 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| ArrayDesignBlock.java | 11.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ArrayDesignPlate.java | 5.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ArraySlide.java | 9.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| AuthenticationContext.java | 4.2 KB | 6429 | 9 years | References #1599: Convert authentication plug-in system to an … | |
| BaseException.java | 2.7 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| BasicBatcher.java | 18.8 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| BasicChildItem.java | 3.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| BasicItem.java | 16.9 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| BatchedPropertyInfo.java | 1.5 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Batcher.java | 2.6 KB | 5818 | 11 years | References #1590: Documentation cleanup Some more sections in the … | |
| BatchUtil.java | 16.0 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| BioAssay.java | 13.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| BioAssaySet.java | 51.7 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| BioMaterial.java | 7.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| BioMaterialEvent.java | 33.1 KB | 6268 | 10 years | Merged patch release 3.2.2 to the trunk. | |
| BioMaterialEventSource.java | 5.8 KB | 5963 | 11 years | Fixes #1657: 'Parent items' column should include used quantity in … | |
| BioMaterialList.java | 23.3 KB | 6390 | 9 years | Fixes #1795: Biomaterial lists should be annotatable No schema … | |
| BioPlate.java | 16.3 KB | 6061 | 11 years | References #1696: Create a coordinate system for 'storage location' … | |
| BioPlateEvent.java | 13.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| BioPlateEventParticipant.java | 8.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| BioPlateEventType.java | 7.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| BioPlateType.java | 10.0 KB | 6132 | 10 years | Fixes #1726: Fix javadoc warnings | |
| BioSource.java | 5.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| BioWell.java | 13.7 KB | 6042 | 11 years | Fixes #1682: Extend the item overview to bioplate items Added … | |
| BlockInfo.java | 3.8 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| BooleanParameterType.java | 2.4 KB | 6372 | 9 years | Merged patch release 3.2.4 to the trunk. | |
| ChangeHistory.java | 14.5 KB | 6355 | 9 years | References #1784: Add support for logging old values Added permission … | |
| ChildItem.java | 4.1 KB | 6528 | 8 years | References #1836: USE permission on a bioplate is not enough to … | |
| Client.java | 9.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ClientDefaultSetting.java | 5.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ClonableProperty.java | 11.0 KB | 6428 | 9 years | References #1599: Convert authentication plug-in system to an … | |
| ClonableReporterQuery.java | 1.9 KB | 5897 | 11 years | References #1616: Clone reporter information to per-experiment tables … | |
| Coloring.java | 5.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| CommonItem.java | 2.5 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| Config.java | 10.2 KB | 5595 | 12 years | References #1592: Unified installation procedure for plug-ins, … | |
| ConfigurationException.java | 1.6 KB | 5384 | 12 years | References #1498: Investigate and fix issues found by FindBugs? Fixes … | |
| ConnectionClosedException.java | 1.2 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ContextKey.java | 2.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Controlled.java | 1.3 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| DatabaseException.java | 1.9 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| DataCube.java | 19.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DataCubeColumn.java | 5.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DataCubeExtraValue.java | 7.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DataCubeFilter.java | 5.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DataCubeLayer.java | 5.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DataFileType.java | 18.3 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| DataQuery.java | 4.1 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| DataResultIterator.java | 3.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DateFormatException.java | 1.4 KB | 5430 | 12 years | References #1512: Add support for datetime annotation types The … | |
| DateParameterType.java | 2.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DateUtil.java | 4.9 KB | 5430 | 12 years | References #1512: Add support for datetime annotation types The … | |
| DbControl.java | 38.4 KB | 6546 | 8 years | Fixes #1855: ItemNotFoundException? when creating a new raw bioassay | |
| DerivedBioAssay.java | 28.7 KB | 6533 | 8 years | Fixes #1847: DerivedBioAssay?.setSoftware() is overwritten by project … | |
| DetachedItemException.java | 1.4 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Directory.java | 25.0 KB | 6511 | 8 years | References #1828: Calling Directory.getNew() multiple times with … | |
| DisallowedValueException.java | 1.8 KB | 4517 | 14 years | Addresses #1106. Missed to change reference wherefrom retrive GPLv3 … | |
| DiskConsumable.java | 2.4 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| DiskUsage.java | 6.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DiskUsageStatistics.java | 8.5 KB | 4517 | 14 years | Addresses #1106. Missed to change reference wherefrom retrive GPLv3 … | |
| DoubleParameterType.java | 4.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DropDynamicTableAction.java | 1.9 KB | 5877 | 11 years | References #1616: Clone reporter information to per-experiment tables … | |
| DynamicExtraValueQuery.java | 2.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DynamicJoin.java | 8.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DynamicPositionQuery.java | 8.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DynamicPositionQueryJoiners.java | 6.1 KB | 6026 | 11 years | References #1673: Allow sorting table listings on single-valued … | |
| DynamicQuery.java | 5.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DynamicRawDataQuery.java | 3.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DynamicReporterQuery.java | 8.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DynamicRestriction.java | 3.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| DynamicResultIterator.java | 5.0 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| DynamicSpotQuery.java | 11.9 KB | 6435 | 9 years | References #1797: Deprecate web services Most compilation warnings … | |
| DynamicSpotQueryJoiners.java | 7.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Experiment.java | 27.6 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| ExtendedProperties.java | 9.7 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| ExtendedProperty.java | 9.2 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| ExtendedPropertyAccessor.java | 6.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ExtendedPropertyLinker.java | 2.1 KB | 4517 | 14 years | Addresses #1106. Missed to change reference wherefrom retrive GPLv3 … | |
| Extract.java | 10.2 KB | 6383 | 9 years | References #1733: Tag items should be annotatable Fixes the … | |
| ExtraValue.java | 16.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ExtraValueExpression.java | 3.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ExtraValueJoin.java | 7.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ExtraValueType.java | 10.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Feature.java | 3.3 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| FeatureBatcher.java | 10.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| FeatureCoordinate.java | 3.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| FeatureIdentificationMethod.java | 5.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| File.java | 51.1 KB | 6502 | 9 years | References #1821: Batch import for files Added a file importer. It … | |
| FileAttachable.java | 1.7 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| FileParameterType.java | 2.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| FileServer.java | 18.8 KB | 6489 | 9 years | Fixes #1814: Add SSH public key or fingerprint field to FileServer? | |
| FileSet.java | 24.1 KB | 6435 | 9 years | References #1797: Deprecate web services Most compilation warnings … | |
| FileSetMember.java | 7.7 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| FileStoreEnabled.java | 2.5 KB | 4517 | 14 years | Addresses #1106. Missed to change reference wherefrom retrive GPLv3 … | |
| FileStoreUtil.java | 12.0 KB | 5764 | 11 years | Fixes #1624: Create array design (feature) importer for GTF files * … | |
| filter-def.hbm.xml | 5.7 KB | 6037 | 11 years | Merge patch release 3.1.1 to the trunk. | |
| FilterBatcher.java | 10.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| FloatParameterType.java | 4.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Formula.java | 24.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| GlobalDefaultSetting.java | 3.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Group.java | 19.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| GroupPermissions.java | 6.7 KB | 5368 | 13 years | References #1459: Named permissions keys that store predefined … | |
| Hardware.java | 11.5 KB | 6333 | 9 years |
Refs #1771. Class\file Hardware.java in …
|
|
| HasAnnotationRestriction.java | 3.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Help.java | 6.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| HibernateUtil.java | 66.9 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| HqlQueryJoiners.java | 5.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Identifiable.java | 1.9 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Include.java | 2.6 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Install.java | 110.9 KB | 6488 | 9 years | Fixes #1816: Allow file server items to re-map URI paths to a … | |
| IntegerParameterType.java | 4.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| IntegerUtil.java | 4.0 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| IntensityFormula.java | 2.4 KB | 5384 | 12 years | References #1498: Investigate and fix issues found by FindBugs? Fixes … | |
| IntensityTransform.java | 7.2 KB | 6372 | 9 years | Merged patch release 3.2.4 to the trunk. | |
| InternalJobQueue.java | 18.9 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| InternalStorageController.java | 10.2 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| InvalidAnnotationException.java | 1.8 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| InvalidDataException.java | 1.9 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| InvalidPasswordException.java | 1.7 KB | 5822 | 11 years | References #1575: Add support for authenticator plug-in in external … | |
| InvalidPathException.java | 1.3 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| InvalidRelationException.java | 2.1 KB | 5623 | 12 years | References #1598: Use the extensions system for data file validators … | |
| InvalidUseOfNullException.java | 1.5 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Item.java | 27.3 KB | 6355 | 9 years | References #1784: Add support for logging old values Added permission … | |
| ItemAlreadyExistsException.java | 1.4 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ItemContext.java | 51.9 KB | 6336 | 9 years | Fixes #1774: Independent sort direction for columns when sorting on … | |
| ItemInUseException.java | 2.0 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ItemKey.java | 16.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ItemModifiedException.java | 2.6 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ItemNotFoundException.java | 1.8 KB | 5822 | 11 years | References #1575: Add support for authenticator plug-in in external … | |
| ItemParameterType.java | 2.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ItemProxy.java | 2.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ItemQuery.java | 3.9 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ItemResultIterator.java | 3.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ItemResultList.java | 7.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ItemSubtype.java | 21.2 KB | 6435 | 9 years | References #1797: Deprecate web services Most compilation warnings … | |
| ItemSubtypeFileType.java | 5.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Job.java | 70.8 KB | 6481 | 9 years | References #1726: Fix javadoc warnings | |
| JobAgent.java | 17.3 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| JobAgentSettings.java | 10.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Key.java | 1.1 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Keyring.java | 27.3 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| Location.java | 3.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| LogControl.java | 3.5 KB | 6080 | 10 years | References #1601: Convert logging plug-in system to an extension point … | |
| LoginException.java | 1.6 KB | 5822 | 11 years | References #1575: Add support for authenticator plug-in in external … | |
| LogUtil.java | 1.7 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| LongParameterType.java | 4.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| MappingBatcher.java | 8.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| MeanRawDataPropertyExpression.java | 3.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| MeasuredBioMaterial.java | 19.3 KB | 6456 | 9 years | Fixes #1806: Fail to load upstream extracts from physical bioassays … | |
| Message.java | 12.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Metadata.java | 24.1 KB | 6355 | 9 years | References #1784: Add support for logging old values Added permission … | |
| Migration.java | 31.7 KB | 5898 | 11 years | References #1630: Migrate from MySQL to PostgreSQL Need two more … | |
| MimeType.java | 9.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| MultiPermissions.java | 17.7 KB | 5689 | 11 years | Fixes #1612: Remove commented out code that is no longer in use Added … | |
| Nameable.java | 3.7 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| NameableUtil.java | 2.0 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| News.java | 8.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| NotLoggedInException.java | 1.2 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| NumberOutOfRangeException.java | 4.4 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Operator.java | 10.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Ownable.java | 2.6 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| OwnableUtil.java | 1.5 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| OwnedItem.java | 3.9 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| package.html | 878 bytes | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ParameterException.java | 1.3 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ParameterInfo.java | 2.0 KB | 5437 | 12 years | Fixes #1519: Add TimestampParameterType? to plug-in api and provide … | |
| ParameterType.java | 9.3 KB | 6372 | 9 years | Merged patch release 3.2.4 to the trunk. | |
| ParameterValuesImpl.java | 7.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Path.java | 8.6 KB | 4951 | 14 years | Merged patch release 2.11.1 to the trunk. | |
| PathParameterType.java | 3.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Permission.java | 8.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PermissionDeniedException.java | 2.8 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| PermissionTemplate.java | 4.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PhysicalBioAssay.java | 14.2 KB | 6328 | 9 years | Refs #1771. Support for annotatable Hardware items added. | |
| Plate.java | 15.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PlateEvent.java | 11.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PlateEventType.java | 10.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PlateGeometry.java | 9.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PlateMapping.java | 16.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PlateType.java | 7.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Platform.java | 15.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PlatformFileType.java | 7.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PlatformVariant.java | 13.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PluginConfiguration.java | 26.3 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| PluginConfigurationRequest.java | 5.2 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| PluginDefinition.java | 45.6 KB | 6435 | 9 years | References #1797: Deprecate web services Most compilation warnings … | |
| PluginExecutionRequest.java | 5.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PluginParameter.java | 5.0 KB | 5218 | 13 years | Removed double 'the the' typos. | |
| PluginPermission.java | 1.0 KB | 4669 | 14 years | Merged 2.9-stable@4643:4666 to trunk. | |
| PluginRequest.java | 9.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PluginResponse.java | 9.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PluginSessionControl.java | 3.0 KB | 6437 | 9 years | References #1599: Convert authentication plug-in system to an … | |
| PluginType.java | 10.3 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PositionBatcher.java | 8.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PositionExtraValueBatcher.java | 11.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| PredefinedQuery.java | 4.8 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| Presets.java | 7.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ProgressReporter.java | 1.4 KB | 5325 | 13 years | References #1485: File items should be able to reference external … | |
| Project.java | 36.5 KB | 6546 | 8 years | Fixes #1855: ItemNotFoundException? when creating a new raw bioassay | |
| ProjectKey.java | 11.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ProjectPermissions.java | 7.5 KB | 5368 | 13 years | References #1459: Named permissions keys that store predefined … | |
| PropertyFilter.java | 27.4 KB | 6214 | 10 years | Merged patch release 3.2.1 to the trunk. | |
| Protocol.java | 17.2 KB | 6435 | 9 years | References #1797: Deprecate web services Most compilation warnings … | |
| Quantity.java | 16.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| QueryExecutor.java | 10.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| QueryRuntimeFilter.java | 2.5 KB | 5818 | 11 years | References #1590: Documentation cleanup Some more sections in the … | |
| QueryRuntimeFilterFactory.java | 15.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| QueryRuntimeFilterManager.java | 2.5 KB | 5818 | 11 years | References #1590: Documentation cleanup Some more sections in the … | |
| Quota.java | 13.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| QuotaException.java | 2.1 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| QuotaType.java | 5.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| RawBioAssay.java | 41.7 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| RawDataBatcher.java | 20.1 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| RawDataProperty.java | 1.7 KB | 6428 | 9 years | References #1599: Convert authentication plug-in system to an … | |
| RawDataPropertyExpression.java | 5.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| RawDataType.java | 9.8 KB | 6435 | 9 years | References #1797: Deprecate web services Most compilation warnings … | |
| RawDataTypes.java | 16.8 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| RawDataUtil.java | 2.4 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| RealJoin.java | 6.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| RealTable.java | 2.7 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Registered.java | 1.4 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Removable.java | 2.3 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Reporter.java | 11.6 KB | 6132 | 10 years | Fixes #1726: Fix javadoc warnings | |
| ReporterBatcher.java | 8.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ReporterCloneBatcher.java | 12.9 KB | 5897 | 11 years | References #1616: Clone reporter information to per-experiment tables … | |
| ReporterCloneTemplate.java | 11.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ReporterList.java | 22.1 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| ReporterListJoin.java | 6.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ReporterPropertyExpression.java | 6.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ReporterScore.java | 2.2 KB | 4517 | 14 years | Addresses #1106. Missed to change reference wherefrom retrive GPLv3 … | |
| ReporterScoreQuery.java | 2.4 KB | 4517 | 14 years | Addresses #1106. Missed to change reference wherefrom retrive GPLv3 … | |
| ReporterScoreResultIterator.java | 3.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ReporterType.java | 6.9 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| RequestInformation.java | 4.9 KB | 4962 | 14 years | Fixes #1329: A plug-in should be able to use a JSP page from an … | |
| Role.java | 11.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| RoleKey.java | 7.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Sample.java | 8.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| ScrollIterator.java | 2.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| SecondaryStorageController.java | 3.1 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ServicesUtil.java | 4.2 KB | 6440 | 9 years | References #1799: Service extensions should have a way to access the … | |
| Session.java | 5.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| SessionControl.java | 69.8 KB | 6448 | 9 years | References #1796: Improve support for jobs running on external servers … | |
| Setting.java | 4.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Shareable.java | 3.6 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| ShareableUtil.java | 9.9 KB | 5590 | 12 years | References #1589: Delete deprecated classes and methods Removed … | |
| SharedItem.java | 4.1 KB | 6434 | 9 years | Fixes #1797: Deprecate web services | |
| SimpleAbsoluteProgressReporter.java | 2.6 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| SimpleProgressReporter.java | 2.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Software.java | 8.5 KB | 6334 | 9 years | Refs #1772. Support for annotatable Software items added. | |
| SpecialQuery.java | 2.5 KB | 5662 | 12 years | References #1153: Handling short read transcript sequence data … | |
| SpotBatcher.java | 11.2 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| SpotExtraValueBatcher.java | 11.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| SpotImage.java | 1.8 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| SpotImages.java | 31.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| StringParameterType.java | 4.4 KB | 6372 | 9 years | Merged patch release 3.2.4 to the trunk. | |
| StringTooLongException.java | 1.8 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| StringUtil.java | 8.6 KB | 6022 | 11 years | Fixes #1672: Join annotation values into a main item query There is … | |
| Subtypable.java | 1.3 KB | 5631 | 12 years | References #1597: Subtypes of items Added support for subtypes with … | |
| SubtypableRelatedItems.java | 1.5 KB | 5823 | 11 years | References #1590: Documentation cleanup Fixed javadoc warnings. | |
| SupportsPushAnnotations.java | 1.6 KB | 5983 | 11 years | References #1605: Inherit annotations from a child path Added support … | |
| SystemItem.java | 2.1 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| SystemItems.java | 4.7 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Tag.java | 5.1 KB | 6335 | 9 years | Refs #1773. Support for annotatable Tag items added. | |
| TimestampParameterType.java | 2.8 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Transactional.java | 2.1 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| TransactionalAction.java | 1.6 KB | 5877 | 11 years | References #1616: Clone reporter information to per-experiment tables … | |
| Transformation.java | 16.0 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Trashcan.java | 10.3 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| Type.java | 15.7 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| Unit.java | 18.5 KB | 6532 | 8 years | Fixes #1845: Changing the conversion formula for a unit doesn't … | |
| UnmodifiableResultList.java | 3.4 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| UnsavedItemException.java | 2.0 KB | 4517 | 14 years | Addresses #1106. Missed to change reference wherefrom retrive GPLv3 … | |
| UnsupportedFileFormatException.java | 2.0 KB | 4594 | 14 years | Fixes #1145: Make the generic raw data importer support batch import | |
| Update.java | 84.5 KB | 6510 | 8 years | References #1786: Create one log entry for every changed property … | |
| UsableDataFileType.java | 1.4 KB | 5713 | 11 years | References #1604: Support for multiple files of the same type in a … | |
| User.java | 40.5 KB | 6428 | 9 years | References #1599: Convert authentication plug-in system to an … | |
| UserClientSetting.java | 8.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| UserDefaultSetting.java | 6.1 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
| UserPermissions.java | 6.7 KB | 5368 | 13 years | References #1459: Named permissions keys that store predefined … | |
| Validatable.java | 1.4 KB | 4889 | 14 years | References #1290: Change source files to UTF-8 Changed 'Hakkinen' to … | |
| Values.java | 4.1 KB | 5384 | 12 years | References #1498: Investigate and fix issues found by FindBugs? Fixes … | |
| Version.java | 4.7 KB | 5607 | 12 years | References #1593: Extension system for the core API References #1592: … | |
| VirtualColumn.java | 12.3 KB | 5885 | 11 years | References #1616: Clone reporter information to per-experiment tables … | |
| VirtualDb.java | 14.0 KB | 6444 | 9 years | Fixes #1801: Switch to slf4j | |
| VirtualTable.java | 12.3 KB | 5888 | 11 years | References #1630: Migrate from MySQL to PostgreSQL Implemented some … | |
| Well.java | 10.5 KB | 6127 | 10 years | Fixes #1725: Add missing @Override annotations Thanks to Eclipse it … | |
Note: See TracBrowser
for help on using the repository browser.
