1 | <?xml version="1.0" encoding="UTF-8"?> |
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2 | <project |
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3 | name="BASE2" |
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4 | default="core" |
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5 | basedir="." |
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6 | > |
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7 | |
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8 | <description> |
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9 | Build file for BASE 2.0 |
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10 | Main targets: |
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11 | core (default): build the core |
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12 | nohibernate: build the core, but do not regenerate the Hibernate mappings |
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13 | test: build the test programs |
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14 | web: build the web client |
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15 | migrate: build the migration client |
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16 | javadoc: generate documentation |
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17 | package: create binary distribution |
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18 | all: core, clients, docs |
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19 | clean: clean up everything |
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20 | </description> |
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21 | |
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22 | <!-- set global properties for this build --> |
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23 | <property name="base.version" value="2.0-alpha1" /> |
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24 | <property name="src" location="src" /> |
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25 | <property name="build" location="build" /> |
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26 | <property name="dist" location="dist" /> |
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27 | <property name="dist.lib" location="${dist}/www/WEB-INF/lib" /> |
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28 | <property name="dist.classes" location="${dist}/www/WEB-INF/classes" /> |
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29 | <property name="dist.bin" location="${dist}/bin" /> |
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30 | <property name="doc" location="doc" /> |
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31 | <property name="lib" location="lib" /> |
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32 | <property name="www" location="www" /> |
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33 | |
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34 | <property name="core.src" location="${src}/core" /> |
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35 | <property name="test.src" location="${src}/test" /> |
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36 | <property name="web.src" location="${src}/clients/web" /> |
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37 | <property name="migrate.src" location="${src}/clients/migrate" /> |
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38 | <property name="install.src" location="${src}/install" /> |
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39 | |
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40 | <property name="core.build" location="${build}/core" /> |
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41 | <property name="test.build" location="${build}/test" /> |
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42 | <property name="migrate.build" location="${build}/clients/migrate" /> |
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43 | <property name="install.build" location="${build}/install" /> |
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44 | <property name="web.build" location="${build}/clients/web" /> |
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45 | <property name="web.inf" location="${www}/WEB-INF" /> |
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46 | |
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47 | <property name="doc.develop" location="${doc}/api/develop" /> |
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48 | <property name="doc.public" location="${doc}/api/public" /> |
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49 | |
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50 | <path id="core.compile.classpath"> |
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51 | <fileset dir="${lib}/compile"> |
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52 | <include name="**/*.jar"/> |
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53 | </fileset> |
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54 | </path> |
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55 | |
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56 | <path id="test.compile.classpath"> |
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57 | <path refid="core.compile.classpath"/> |
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58 | <pathelement location="${core.build}"/> |
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59 | </path> |
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60 | |
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61 | <path id="migrate.compile.classpath"> |
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62 | <path refid="core.compile.classpath" /> |
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63 | <pathelement location="${core.build}" /> |
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64 | </path> |
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65 | |
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66 | <path id="install.compile.classpath"> |
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67 | <path refid="core.compile.classpath" /> |
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68 | <pathelement location="${core.build}" /> |
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69 | </path> |
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70 | |
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71 | <path id="web.compile.classpath"> |
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72 | <path refid="core.compile.classpath"/> |
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73 | <pathelement location="${core.build}"/> |
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74 | </path> |
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75 | |
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76 | <path id="hibernatedoclet.classpath"> |
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77 | <fileset dir="${lib}/hibernatedoclet"> |
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78 | <include name="**/*.jar"/> |
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79 | </fileset> |
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80 | </path> |
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81 | |
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82 | <taskdef |
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83 | name="hibernatedoclet" |
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84 | classname="xdoclet.modules.hibernate.HibernateDocletTask" |
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85 | classpathref="hibernatedoclet.classpath" |
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86 | description="Task for generating Hibernate mapping files from XDoclet tags" |
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87 | /> |
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88 | |
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89 | <target |
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90 | name="all" |
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91 | depends="core, test, web, javadoc" |
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92 | description="Compile/create everything" |
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93 | /> |
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94 | |
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95 | <target |
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96 | name="core" |
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97 | depends="core.compile,core.hibernate" |
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98 | description="Compile the core, generate Hibernate mappings and put everyting in a JAR file" |
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99 | /> |
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100 | |
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101 | <target |
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102 | name="nohibernate" |
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103 | depends="core.compile" |
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104 | description="Compile the core, assuming Hibernate mappings already exists |
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105 | and put everyting in a JAR file" |
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106 | /> |
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107 | |
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108 | <target |
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109 | name="core.hibernate" |
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110 | depends="core.compile" |
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111 | description="Generates Hibernate mappings for the core." |
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112 | > |
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113 | <hibernatedoclet |
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114 | destdir="${core.build}" |
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115 | excludedtags="@version,@author,@todo" |
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116 | mergedir="${core.build}" |
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117 | verbose="${xdoclet.verbose}"> |
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118 | <fileset dir="${core.src}"> |
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119 | <include name="**/*.java"/> |
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120 | </fileset> |
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121 | <hibernate version="2.0"/> |
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122 | </hibernatedoclet> |
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123 | </target> |
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124 | |
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125 | <target |
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126 | name="core.compile" |
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127 | depends="" |
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128 | description="compile the core source code" |
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129 | > |
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130 | <mkdir dir="${core.build}"/> |
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131 | <javac |
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132 | encoding="ISO-8859-1" |
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133 | srcdir="${core.src}" |
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134 | destdir="${core.build}" |
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135 | classpathref="core.compile.classpath" |
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136 | debug="true" |
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137 | deprecation="true" |
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138 | /> |
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139 | <copy todir="${core.build}"> |
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140 | <fileset dir="${core.src}"> |
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141 | <include name="**/*.xml" /> |
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142 | <include name="**/*.dtd" /> |
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143 | <include name="**/*.config" /> |
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144 | <include name="**/*.properties" /> |
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145 | </fileset> |
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146 | </copy> |
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147 | </target> |
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148 | |
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149 | <target |
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150 | name="test" |
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151 | depends="test.compile" |
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152 | description="Compile the test programs" |
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153 | /> |
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154 | |
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155 | <target name="test.compile" |
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156 | depends="" |
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157 | description="compile the source code for the test programs" |
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158 | > |
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159 | <mkdir dir="${test.build}"/> |
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160 | <javac |
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161 | srcdir="${test.src}" |
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162 | destdir="${test.build}" |
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163 | classpathref="test.compile.classpath" |
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164 | debug="true" |
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165 | deprecation="true" |
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166 | encoding="ISO-8859-1" |
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167 | /> |
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168 | <copy todir="${test.build}"> |
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169 | <fileset dir="${test.src}"> |
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170 | <include name="*.*" /> |
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171 | <exclude name="*.java" /> |
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172 | </fileset> |
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173 | </copy> |
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174 | <chmod file="${test.build}/run.sh" perm="a+x"/> |
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175 | <copy todir="${test.build}"> |
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176 | <fileset dir="${src}"> |
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177 | <include name="*.config" /> |
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178 | <include name="*.properties" /> |
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179 | <include name="*.xml" /> |
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180 | </fileset> |
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181 | </copy> |
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182 | </target> |
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183 | |
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184 | <target |
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185 | name="migrate" |
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186 | depends="dist.migrate" |
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187 | description="create the Migrate.jar" |
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188 | > |
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189 | </target> |
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190 | |
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191 | <target name="dist.migrate" depends="migrate.compile,dist.init" description=""> |
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192 | <jar basedir="${migrate.build}" jarfile="${dist.bin}/Migrate.jar" includes="**/*.class"> |
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193 | </jar> |
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194 | <copy todir="${dist.bin}" file="${migrate.src}/migrate_from_1.2.sh" /> |
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195 | <chmod file="${dist.bin}/migrate_from_1.2.sh" perm="a+x"/> |
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196 | <copy tofile="${dist.classes}/migrate.properties" file="${migrate.src}/migrate.properties.in" /> |
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197 | <chmod file="${dist.classes}/migrate.properties" perm="600"/> |
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198 | |
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199 | </target> |
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200 | |
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201 | <target name="migrate.properties" if="migrate.newproperties"> |
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202 | <copy tofile="${migrate.build}/migrate.properties" file="${migrate.src}/migrate.properties.in" /> |
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203 | <chmod file="${migrate.build}/migrate.properties" perm="600"/> |
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204 | </target> |
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205 | |
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206 | <target name="migrate.compile" description="compile the source code for the migration program"> |
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207 | <mkdir dir="${migrate.build}" /> |
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208 | <javac |
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209 | encoding="ISO-8859-1" |
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210 | srcdir="${migrate.src}" |
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211 | destdir="${migrate.build}" |
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212 | classpathref="migrate.compile.classpath" |
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213 | debug="true" |
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214 | /> |
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215 | <copy todir="${migrate.build}"> |
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216 | <fileset dir="${src}"> |
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217 | <include name="*.config" /> |
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218 | <include name="*.properties" /> |
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219 | <include name="*.xml" /> |
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220 | </fileset> |
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221 | </copy> |
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222 | <copy todir="${migrate.build}" file="${migrate.src}/migrate_from_1.2.sh" /> |
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223 | <chmod file="${migrate.build}/migrate_from_1.2.sh" perm="a+x"/> |
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224 | <condition property="migrate.newproperties"> |
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225 | <not> |
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226 | <available file="${migrate.build}/migrate.properties"/> |
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227 | </not> |
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228 | </condition> |
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229 | <antcall target="migrate.properties"/> |
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230 | </target> |
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231 | |
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232 | <target |
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233 | name="install" |
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234 | depends="install.compile" |
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235 | description="Compile the installation program" |
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236 | > |
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237 | </target> |
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238 | |
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239 | <target name="install.compile" |
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240 | description="compile the source code for the installation program" |
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241 | > |
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242 | <mkdir dir="${install.build}" /> |
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243 | <javac |
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244 | encoding="ISO-8859-1" |
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245 | srcdir="${install.src}" |
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246 | destdir="${install.build}" |
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247 | classpathref="install.compile.classpath" |
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248 | debug="true" |
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249 | /> |
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250 | </target> |
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251 | |
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252 | <target |
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253 | name="web" |
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254 | depends="web.compile" |
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255 | description="Compile the web client, and copy required files to the web-inf directory" |
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256 | > |
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257 | <mkdir dir="${web.inf}/lib"/> |
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258 | <mkdir dir="${web.inf}/classes"/> |
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259 | <jar |
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260 | basedir="${core.build}" |
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261 | jarfile="${web.inf}/lib/BASE2Core.jar" |
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262 | /> |
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263 | <jar |
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264 | basedir="${web.build}" |
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265 | jarfile="${web.inf}/lib/BASE2Webclient.jar" |
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266 | /> |
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267 | <copy todir="${web.inf}/lib"> |
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268 | <fileset dir="${lib}/compile"> |
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269 | <include name="**/*.jar"/> |
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270 | </fileset> |
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271 | <fileset dir="${lib}/dist"> |
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272 | <include name="**/*.jar"/> |
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273 | </fileset> |
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274 | </copy> |
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275 | <copy todir="${web.inf}/classes"> |
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276 | <fileset dir="${src}"> |
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277 | <include name="*.config"/> |
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278 | <include name="*.properties"/> |
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279 | <include name="*.xml"/> |
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280 | </fileset> |
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281 | </copy> |
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282 | </target> |
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283 | |
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284 | <target |
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285 | name="web.compile" |
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286 | depends="" |
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287 | description="compile the source code for the web client" |
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288 | > |
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289 | <mkdir dir="${web.build}"/> |
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290 | <javac |
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291 | encoding="ISO-8859-1" |
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292 | srcdir="${web.src}" |
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293 | destdir="${web.build}" |
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294 | classpathref="web.compile.classpath" |
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295 | debug="true" |
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296 | /> |
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297 | </target> |
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298 | |
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299 | <target |
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300 | name="dist" |
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301 | depends="dist.init,dist.core,dist.install,dist.web,dist.doc,dist.migrate" |
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302 | description="Create the distribution and put all files in their correct places"> |
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303 | <copy todir="${dist.lib}"> |
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304 | <fileset dir="${lib}/compile"> |
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305 | <include name="**/*.jar"/> |
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306 | <exclude name="**/jai*.jar" /> |
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307 | <exclude name="**/servlet.jar" /> |
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308 | </fileset> |
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309 | <fileset dir="${lib}/dist"> |
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310 | <include name="**/*.jar"/> |
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311 | </fileset> |
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312 | </copy> |
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313 | <copy tofile="${dist.classes}/base.config" file="${src}/base.config.in" /> |
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314 | <chmod file="${dist.classes}/base.config" perm="600"/> |
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315 | <copy todir="${dist.classes}" file="${src}/hibernate.properties" /> |
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316 | <copy todir="${dist.classes}" file="${src}/log4j.properties" /> |
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317 | <copy todir="${dist.classes}" file="${src}/extended-properties.xml" /> |
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318 | <copy todir="${dist.classes}" file="${src}/raw-data-types.xml" /> |
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319 | <copy todir="${dist.classes}" file="${src}/mysql-queries.xml" /> |
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320 | <copy todir="${dist.classes}" file="${src}/sqlserver-queries.xml" /> |
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321 | </target> |
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322 | |
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323 | <target |
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324 | name="dist.init" |
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325 | description="Create the distribution directory structure" |
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326 | > |
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327 | <mkdir dir="${dist}"/> |
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328 | <mkdir dir="${dist.bin}"/> |
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329 | <mkdir dir="${dist}/doc"/> |
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330 | <mkdir dir="${dist}/www"/> |
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331 | <mkdir dir="${dist.lib}"/> |
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332 | </target> |
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333 | |
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334 | <target |
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335 | name="dist.core" |
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336 | depends="core.compile,core.hibernate" |
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337 | description="Generate the core jar file: BASE2Core.jar" |
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338 | > |
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339 | <jar |
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340 | basedir="${core.build}" |
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341 | jarfile="${dist.lib}/BASE2Core.jar" |
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342 | /> |
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343 | </target> |
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344 | <target |
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345 | name="dist.install" |
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346 | depends="install.compile" |
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347 | description="Generate the installation jar file: BASE2Install.jar" |
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348 | > |
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349 | <jar |
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350 | basedir="${install.build}" |
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351 | jarfile="${dist.bin}/BASE2Install.jar" |
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352 | /> |
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353 | <copy todir="${dist.bin}" file="${install.src}/initdb.sh" /> |
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354 | <chmod file="${dist.bin}/initdb.sh" perm="a+x"/> |
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355 | </target> |
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356 | <target |
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357 | name="dist.web" |
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358 | depends="web" |
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359 | description="Generate the web jar file: BASE2Webclient.jar |
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360 | and copy all *.jsp files" |
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361 | > |
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362 | <jar |
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363 | basedir="${web.build}" |
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364 | jarfile="${dist.lib}/BASE2Webclient.jar" |
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365 | /> |
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366 | <copy |
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367 | todir="${dist}/www" |
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368 | > |
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369 | <fileset dir="${www}"> |
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370 | <include name="**/*"/> |
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371 | <exclude name="CVS" /> |
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372 | <exclude name="**/*.jar" /> |
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373 | </fileset> |
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374 | </copy> |
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375 | </target> |
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376 | |
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377 | <target |
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378 | name="dist.doc" |
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379 | depends="" |
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380 | description="Copy required documentation" |
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381 | > |
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382 | <copy todir="${dist}" file="${doc}/installation.txt" /> |
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383 | <copy todir="${dist}" file="base2.license.txt" /> |
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384 | <copy todir="${dist}/doc" file="${doc}/3rd-party-components.txt" /> |
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385 | <copy todir="${dist}/doc" file="${doc}/Hibernate_modifications.txt" /> |
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386 | <copy todir="${dist}/doc/licenses"> |
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387 | <fileset dir="${doc}/licenses" /> |
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388 | </copy> |
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389 | </target> |
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390 | |
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391 | <target |
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392 | name="package" |
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393 | depends="dist" |
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394 | description="Package the distribution" |
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395 | > |
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396 | <tar |
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397 | destfile="base-${base.version}.tar.gz" |
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398 | compression="gzip" |
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399 | > |
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400 | <tarfileset |
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401 | dir="${dist}" |
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402 | prefix="base-${base.version}" |
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403 | preserveLeadingSlashes="true" |
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404 | /> |
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405 | </tar> |
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406 | <checksum |
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407 | file="base-${base.version}.tar.gz" |
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408 | /> |
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409 | </target> |
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410 | |
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411 | <target |
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412 | name="clean" |
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413 | description="Remove all generated files and backup files" > |
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414 | <delete dir="${build}"/> |
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415 | <delete dir="${dist}"/> |
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416 | <delete dir="${web.inf}/lib"/> |
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417 | <delete dir="${web.inf}/classes"/> |
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418 | <delete> |
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419 | <fileset dir="." includes="**/*~" defaultexcludes="no"/> |
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420 | <fileset dir="." includes="**/.#*" defaultexcludes="no"/> |
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421 | </delete> |
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422 | </target> |
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423 | |
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424 | <target name="uml" |
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425 | description="generate uml for core package using UmlGraph" > |
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426 | <javadoc |
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427 | packagenames="net.sf.basedb.*" |
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428 | sourcepath="${core.src}" |
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429 | > |
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430 | <doclet name="UmlGraph" path="${lib}/umldoclet/UmlGraph.jar"> |
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431 | <param name="-hide" value="java.lang.Exception"/> |
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432 | </doclet> |
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433 | </javadoc> |
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434 | <apply executable="dot"> |
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435 | <arg value="-Tps"/> |
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436 | <arg value="-o${doc}/core.ps"/> |
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437 | <fileset file="graph.dot"/> |
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438 | </apply> |
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439 | </target> |
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440 | |
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441 | <target |
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442 | name="javadoc" |
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443 | depends="javadoc.develop" |
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444 | /> |
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445 | |
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446 | <target |
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447 | name="javadoc.develop" |
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448 | description="generate JavaDoc for developers of BASE, ie. include private and protecteed methods."> |
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449 | <!-- Create the time stamp --> |
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450 | <tstamp> |
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451 | <format property="TODAY" pattern="yyyy-MM-dd"/> |
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452 | </tstamp> |
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453 | <mkdir dir="${doc}"/> |
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454 | |
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455 | <javadoc |
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456 | packagenames="net.sf.basedb.*" |
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457 | sourcepath="${core.src}:${web.src}" |
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458 | destdir="${doc.develop}" |
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459 | author="true" |
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460 | version="true" |
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461 | use="true" |
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462 | private="true" |
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463 | windowtitle="BASE 2.0 Class documentation (developer edition)" |
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464 | stylesheetfile="${doc}/styles.css" |
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465 | classpathref="core.compile.classpath" |
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466 | linksource="yes" |
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467 | breakiterator="yes" |
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468 | encoding="iso-8859-1" |
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469 | > |
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470 | <header><![CDATA[Last update: ${TODAY}]]></header> |
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471 | <link href="http://java.sun.com/j2se/1.4/docs/api"/> |
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472 | <link href="http://www.thep.lu.se/~nicklas/bioinfo"/> |
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473 | <tag name="base.internal" description="Developer info" /> |
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474 | <tag name="hibernate.class" description="Hibernate: class" scope="types" /> |
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475 | <tag name="hibernate.subclass" description="Hibernate: subclass" scope="types" /> |
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476 | <tag name="hibernate.discriminator" description="Hibernate: discriminator" scope="types" /> |
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477 | <tag name="hibernate.id" description="Hibernate: id" scope="methods" /> |
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478 | <tag name="hibernate.generator-param" description="Hibernate: generator-param" scope="methods" /> |
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479 | <tag name="hibernate.version" description="Hibernate: version" scope="methods" /> |
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480 | <tag name="hibernate.property" description="Hibernate: property" scope="methods" /> |
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481 | <tag name="hibernate.key-property" description="Hibernate: key-property" scope="methods" /> |
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482 | <tag name="hibernate.column" description="Hibernate: column" scope="methods" /> |
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483 | <tag name="hibernate.map" description="Hibernate: map" scope="methods" /> |
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484 | <tag name="hibernate.set" description="Hibernate: set" scope="methods" /> |
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485 | <tag name="hibernate.list" description="Hibernate: list" scope="methods" /> |
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486 | <tag name="hibernate.array" description="Hibernate: array" scope="methods" /> |
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487 | <tag name="hibernate.one-to-one" description="Hibernate: one-to-one" scope="methods" /> |
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488 | <tag name="hibernate.many-to-one" description="Hibernate: many-to-one" scope="methods" /> |
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489 | <tag name="hibernate.many-to-many" description="Hibernate: many-to-many" scope="methods" /> |
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490 | <tag name="hibernate.index-many-to-many" description="Hibernate: index-many-to-many" scope="methods" /> |
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491 | <tag name="hibernate.collection-key" description="Hibernate: collection-key" scope="methods" /> |
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492 | <tag name="hibernate.collection-index" description="Hibernate: collection-index" scope="methods" /> |
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493 | <tag name="hibernate.collection-composite-index" description="Hibernate: collection-composite-index" scope="methods" /> |
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494 | <tag name="hibernate.collection-element" description="Hibernate: collection-element" scope="methods" /> |
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495 | <tag name="hibernate.collection-composite-element" description="Hibernate: collection-composite-element" scope="methods" /> |
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496 | <tag name="hibernate.collection-one-to-many" description="Hibernate: collection-one-to-many" scope="methods" /> |
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497 | <tag name="hibernate.collection-many-to-many" description="Hibernate: collection-many-to-many" scope="methods" /> |
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498 | </javadoc> |
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499 | </target> |
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500 | |
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501 | <target |
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502 | name="javadoc.public" |
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503 | description="generate public JavaDoc, ie. without private and protected methods"> |
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504 | <javadoc |
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505 | packagenames="net.sf.basedb.*" |
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506 | sourcepath="${src}" |
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507 | destdir="${doc.public}" |
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508 | author="true" |
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509 | version="true" |
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510 | protected="true" |
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511 | windowtitle="BASE 2.0 Class documentation" |
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512 | stylesheetfile="${doc}/styles.css" |
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513 | classpathref="core.compile.classpath" |
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514 | breakiterator="yes" |
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515 | encoding="iso-8859-1" |
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516 | > |
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517 | <header><![CDATA[Last update: ${TODAY}]]></header> |
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518 | <link href="http://java.sun.com/j2se/1.4/docs/api"/> |
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519 | <link href="http://www.thep.lu.se/~nicklas/bioinfo"/> |
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520 | <tag name="base.internal" description="Developer info" /> |
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521 | <tag name="hibernate.class" description="Hibernate: class" scope="types" enabled="false" /> |
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522 | <tag name="hibernate.subclass" description="Hibernate: subclass" scope="types" enabled="false" /> |
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523 | <tag name="hibernate.discriminator" description="Hibernate: discriminator" scope="types" enabled="false" /> |
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524 | <tag name="hibernate.id" description="Hibernate: id" scope="methods" enabled="false" /> |
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525 | <tag name="hibernate.generator-param" description="Hibernate: generator-param" scope="methods" enabled="false" /> |
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526 | <tag name="hibernate.version" description="Hibernate: version" scope="methods" enabled="false" /> |
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527 | <tag name="hibernate.property" description="Hibernate: property" scope="methods" enabled="false" /> |
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528 | <tag name="hibernate.key-property" description="Hibernate: key-property" scope="methods" enabled="false" /> |
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529 | <tag name="hibernate.column" description="Hibernate: column" scope="methods" /> |
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530 | <tag name="hibernate.map" description="Hibernate: map" scope="methods" enabled="false" /> |
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531 | <tag name="hibernate.set" description="Hibernate: set" scope="methods" enabled="false" /> |
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532 | <tag name="hibernate.list" description="Hibernate: list" scope="methods" enabled="false" /> |
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533 | <tag name="hibernate.array" description="Hibernate: array" scope="methods" enabled="false" /> |
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534 | <tag name="hibernate.one-to-one" description="Hibernate: one-to-one" scope="methods" enabled="false" /> |
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535 | <tag name="hibernate.many-to-one" description="Hibernate: many-to-one" scope="methods" enabled="false" /> |
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536 | <tag name="hibernate.many-to-many" description="Hibernate: many-to-many" scope="methods" enabled="false" /> |
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537 | <tag name="hibernate.index-many-to-many" description="Hibernate: index-many-to-many" scope="methods" enabled="false" /> |
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538 | <tag name="hibernate.collection-key" description="Hibernate: collection-key" scope="methods" enabled="false" /> |
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539 | <tag name="hibernate.collection-index" description="Hibernate: collection-index" scope="methods" enabled="false" /> |
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540 | <tag name="hibernate.collection-composite-index" description="Hibernate: collection-composite-index" scope="methods" enabled="false" /> |
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541 | <tag name="hibernate.collection-element" description="Hibernate: collection-element" scope="methods" enabled="false" /> |
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542 | <tag name="hibernate.collection-composite-element" description="Hibernate: collection-composite-element" scope="methods" enabled="false" /> |
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543 | <tag name="hibernate.collection-one-to-many" description="Hibernate: collection-one-to-many" scope="methods" enabled="false" /> |
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544 | <tag name="hibernate.collection-many-to-many" description="Hibernate: collection-many-to-many" scope="methods" enabled="false" /> |
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545 | </javadoc> |
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546 | </target> |
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547 | |
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548 | |
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549 | </project> |
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