source: trunk/config/test/performance.properties

Last change on this file was 4508, checked in by Jari Häkkinen, 13 years ago

Addresses #1106. Missed to change reference wherefrom retrive GPLv3 license text. And some other changes.

File size: 1.1 KB
Line 
1# $Id: base.config.in 2932 2006-11-17 11:29:27Z nicklas $
2#
3# Copyright (C) 2007 Nicklas Nordborg
4#
5# This file is part of BASE - BioArray Software Environment.
6# Available at http://base.thep.lu.se/
7#
8# BASE is free software; you can redistribute it and/or
9# modify it under the terms of the GNU General Public License
10# as published by the Free Software Foundation; either version 3
11# of the License, or (at your option) any later version.
12#
13# BASE is distributed in the hope that it will be useful,
14# but WITHOUT ANY WARRANTY; without even the implied warranty of
15# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
16# GNU General Public License for more details.
17#
18# You should have received a copy of the GNU General Public License
19# along with BASE. If not, see <http://www.gnu.org/licenses/>.
20# ----------------------------------------
21
22
23# Name of formula to use for intensity calculation
24intensity.genepix   Mean FG - Mean BG
25
26# JEP expression to use for filtering
27filter.expression   ch(1) > 100 && ch(2) > 100
28
29# LOWESS options
30lowess.fitFraction  0.33
31lowess.delta      0.1
32lowess.iterations   4
33lowess.blockGroup   12
34
35
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