1 | <?xml version="1.0" encoding="UTF-8"?> |
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2 | <!DOCTYPE configfile SYSTEM "plugin-configuration-file.dtd"> |
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3 | <!-- |
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4 | $Id: plate_importer(96wells).xml 3054 2007-01-09 13:46:41Z martin $ |
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5 | |
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6 | Copyright (C) Authors contributing to this file. |
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7 | |
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8 | This file is part of BASE - BioArray Software Environment. |
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9 | Available at http://base.thep.lu.se/ |
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10 | |
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11 | BASE is free software; you can redistribute it and/or |
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12 | modify it under the terms of the GNU General Public License |
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13 | as published by the Free Software Foundation; either version 2 |
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14 | of the License, or (at your option) any later version. |
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15 | |
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16 | BASE is distributed in the hope that it will be useful, |
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17 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
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18 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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19 | GNU General Public License for more details. |
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20 | |
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21 | You should have received a copy of the GNU General Public License |
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22 | along with this program; if not, write to the Free Software |
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23 | Foundation, Inc., 59 Temple Place - Suite 330, |
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24 | Boston, MA 02111-1307, USA. |
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25 | --> |
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26 | <configfile> |
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27 | <configuration pluginClassName="net.sf.basedb.plugins.PlateFlatFileImporter"> |
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28 | <configname>96_well plate import</configname> |
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29 | <description>This configuration is for the Plate importer plugin when to import 96-well plates.</description> |
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30 | <parameter> |
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31 | <name>nameColumnMapping</name> |
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32 | <label>Plate number/name</label> |
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33 | <description /> |
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34 | <class>java.lang.String</class> |
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35 | <value>\96_number\</value> |
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36 | </parameter> |
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37 | <parameter> |
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38 | <name>reporterColumnMapping</name> |
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39 | <label>Reporter ID</label> |
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40 | <description /> |
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41 | <class>java.lang.String</class> |
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42 | <value>\oligo_id\</value> |
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43 | </parameter> |
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44 | <parameter> |
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45 | <name>dataHeaderRegexp</name> |
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46 | <label>Data header</label> |
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47 | <description /> |
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48 | <class>java.lang.String</class> |
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49 | <value>96_number\t96_column\t96_row\t96_position\toligo_id.*</value> |
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50 | </parameter> |
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51 | <parameter> |
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52 | <name>trimQuotes</name> |
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53 | <label>Remove quotes</label> |
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54 | <description /> |
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55 | <class>java.lang.Boolean</class> |
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56 | <value>true</value> |
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57 | </parameter> |
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58 | <parameter> |
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59 | <name>dataSplitterRegexp</name> |
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60 | <label>Data splitter</label> |
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61 | <description /> |
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62 | <class>java.lang.String</class> |
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63 | <value>\t</value> |
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64 | </parameter> |
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65 | <parameter> |
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66 | <name>columnColumnMapping</name> |
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67 | <label>Column</label> |
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68 | <description /> |
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69 | <class>java.lang.String</class> |
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70 | <value>\96_column\</value> |
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71 | </parameter> |
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72 | <parameter> |
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73 | <name>rowColumnMapping</name> |
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74 | <label>Row</label> |
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75 | <description /> |
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76 | <class>java.lang.String</class> |
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77 | <value>\96_row\</value> |
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78 | </parameter> |
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79 | </configuration> |
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80 | </configfile> |
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