| 1 | <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd"> |
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| 2 | <!-- |
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| 3 | $Id: index.html 3681 2007-08-17 11:56:30Z nicklas $ |
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| 4 | |
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| 5 | Copyright (C) 2005 Nicklas Nordborg |
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| 6 | Copyright (C) 2006 Jari Hakkinen, Nicklas Nordborg |
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| 7 | |
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| 8 | This file is part of BASE - BioArray Software Environment. |
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| 9 | Available at http://base.thep.lu.se/ |
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| 10 | |
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| 11 | BASE is free software; you can redistribute it and/or |
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| 12 | modify it under the terms of the GNU General Public License |
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| 13 | as published by the Free Software Foundation; either version 2 |
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| 14 | of the License, or (at your option) any later version. |
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| 15 | |
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| 16 | BASE is distributed in the hope that it will be useful, |
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| 17 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 18 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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| 19 | GNU General Public License for more details. |
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| 20 | |
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| 21 | You should have received a copy of the GNU General Public License |
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| 22 | along with this program; if not, write to the Free Software |
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| 23 | Foundation, Inc., 59 Temple Place - Suite 330, |
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| 24 | Boston, MA 02111-1307, USA. |
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| 25 | --> |
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| 26 | <html> |
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| 27 | <head> |
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| 28 | <title>BASE - Development information - An overview of the database schema and data layer API</title> |
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| 29 | <link rel=stylesheet type="text/css" href="../../../styles.css"> |
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| 30 | </head> |
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| 31 | <body> |
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| 32 | |
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| 33 | <div class="navigation"> |
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| 34 | <a href="../../../index.html">BASE</a> |
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| 35 | <img src="../../../next.gif"> |
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| 36 | <a href="../../index.html">Development information</a> |
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| 37 | <img src="../../../next.gif"> |
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| 38 | An overview of the database schema and data layer API |
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| 39 | </div> |
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| 40 | |
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| 41 | <h1>An overview of the database schema and data layer API</h1> |
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| 42 | |
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| 43 | <div class="abstract"> |
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| 44 | <p> |
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| 45 | Complete information about the database and data layer. |
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| 46 | The schema is divided into several sections, each describing a |
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| 47 | particular part of the system. Ie. user management, files, |
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| 48 | biomaterials, etc. |
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| 49 | </p> |
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| 50 | |
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| 51 | <p> |
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| 52 | <b>See also</b> |
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| 53 | </p> |
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| 54 | <ul> |
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| 55 | <li><a href="../../../api/net/sf/basedb/core/data/package-summary.html">Javadoc for the net.sf.basedb.core.data package</a> |
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| 56 | <li><a href="../../coding/data/index.html">Coding rules and guidelines for the data layer</a> |
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| 57 | </ul> |
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| 58 | |
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| 59 | <p class="authors"> |
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| 60 | <b>Last updated:</b> $Date: 2007-08-17 11:56:30 +0000 (Fri, 17 Aug 2007) $ |
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| 61 | </p> |
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| 62 | </div> |
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| 63 | |
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| 64 | <p> |
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| 65 | The following diagram gives an overview the classes in this |
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| 66 | package and how they relate to various functionality in BASE |
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| 67 | and to each other. Each box is linked to a document with a more |
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| 68 | detailed diagram and explanations. |
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| 69 | </p> |
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| 70 | <img src="overview.gif" usemap="#overview" border=0> |
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| 71 | <map name="overview"> |
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| 72 | <area href="basic.html" coords="249,0,396,50"> |
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| 73 | <area href="authentication.html" coords="249,69,396,118"> |
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| 74 | <area href="wares.html" coords="0,140,150,190"> |
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| 75 | <area href="misc.html" coords="166,140,314,190"> |
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| 76 | <area href="quota.html" coords="329,140,479,190"> |
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| 77 | <area href="clients.html" coords="495,140,642,190"> |
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| 78 | <area href="reporters.html" coords="167,213,316,262"> |
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| 79 | <area href="files.html" coords="330,213,478,262"> |
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| 80 | <area href="protocols.html" coords="258,277,405,326"> |
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| 81 | <area href="parameters.html" coords="419,277,566,326"> |
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| 82 | <area href="annotations.html" coords="322,354,470,403"> |
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| 83 | <area href="plates.html" coords="0,341,159,403"> |
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| 84 | <area href="slides.html" coords="67,433,226,496"> |
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| 85 | <area href="biomaterial.html" coords="261,433,420,496"> |
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| 86 | <area href="plugins.html" coords="448,433,605,496"> |
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| 87 | <area href="hybridizations.html" coords="162,524,320,590"> |
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| 88 | <area href="experiments.html" coords="162,620,320,680"> |
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| 89 | </map> |
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| 90 | </p> |
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| 91 | |
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| 92 | <h2>More...</h2> |
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| 93 | <p> |
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| 94 | Additional information for parts that are not included in the above |
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| 95 | diagram. |
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| 96 | </p> |
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| 97 | |
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| 98 | <ul> |
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| 99 | <li><a href="data_in_files.html">Store data in files</a></li> |
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| 100 | </ul> |
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| 101 | |
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| 102 | </body> |
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| 103 | </html> |
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