1 | <?xml version="1.0" encoding="UTF-8"?> |
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2 | <!DOCTYPE appendix PUBLIC |
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3 | "-//Dawid Weiss//DTD DocBook V3.1-Based Extension for XML and graphics inclusion//EN" |
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4 | "../../../../lib/docbook/preprocess/dweiss-docbook-extensions.dtd"> |
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5 | <!-- |
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6 | $Id: jobagent.properties.xml 3363 2007-05-22 20:48:49Z nicklas $ |
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7 | |
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8 | Copyright (C) Authors contributing to this file. |
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9 | |
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10 | This file is part of BASE - BioArray Software Environment. |
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11 | Available at http://base.thep.lu.se/ |
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12 | |
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13 | BASE is free software; you can redistribute it and/or |
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14 | modify it under the terms of the GNU General Public License |
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15 | as published by the Free Software Foundation; either version 2 |
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16 | of the License, or (at your option) any later version. |
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17 | |
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18 | BASE is distributed in the hope that it will be useful, |
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19 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
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20 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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21 | GNU General Public License for more details. |
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22 | |
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23 | You should have received a copy of the GNU General Public License |
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24 | along with this program; if not, write to the Free Software |
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25 | Foundation, Inc., 59 Temple Place - Suite 330, |
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26 | Boston, MA 02111-1307, USA. |
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27 | --> |
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28 | |
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29 | <appendix id="appendix.jobagent.properties"> |
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30 | <title>jobagent.properties reference</title> |
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31 | |
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32 | <para> |
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33 | The <filename>jobagent.properties</filename> file is the main configuration file |
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34 | for job agents. It is located in the <filename><basedir>/www/WEB-INF/classes</filename> |
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35 | directory. |
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36 | </para> |
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37 | |
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38 | <simplesect id="appendix.jobagent.properties.base"> |
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39 | <title>BASE settings</title> |
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40 | |
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41 | <para> |
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42 | This section describes the configuration parameters that |
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43 | are used by the job agent to get access to the BASE server. |
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44 | </para> |
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45 | |
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46 | <variablelist> |
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47 | <varlistentry> |
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48 | <term><property>agent.user</property></term> |
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49 | <listitem> |
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50 | <para> |
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51 | Required. The BASE user account the job agent should use to login |
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52 | to the BASE server. The user account must have sufficient privileges |
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53 | to access jobs and job agents. The <emphasis>Job agent</emphasis> |
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54 | role is a predefined role with all permissions a job agent needs. |
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55 | There is also a predefined user account with the login |
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56 | <emphasis>jobagent</emphasis>. This account is disabled by default and |
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57 | has to be enabled and given a password before it can be used. |
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58 | </para> |
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59 | </listitem> |
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60 | </varlistentry> |
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61 | |
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62 | <varlistentry> |
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63 | <term><property>agent.password</property></term> |
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64 | <listitem> |
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65 | <para> |
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66 | Required. The password for the user account. |
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67 | </para> |
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68 | </listitem> |
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69 | </varlistentry> |
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70 | |
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71 | <varlistentry> |
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72 | <term><property>agent.id</property></term> |
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73 | <listitem> |
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74 | <para> |
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75 | Required. A unique ID that identifies this job agent among other |
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76 | job agent. If multiple job agents are installed each job agent |
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77 | should have it's own unique ID. |
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78 | </para> |
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79 | </listitem> |
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80 | </varlistentry> |
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81 | |
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82 | <varlistentry> |
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83 | <term><property>agent.name</property></term> |
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84 | <listitem> |
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85 | <para> |
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86 | Optional. The name of the job agent. If not specified the ID is used. |
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87 | The name is only used when registering the job agent with the BASE |
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88 | server. |
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89 | </para> |
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90 | </listitem> |
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91 | </varlistentry> |
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92 | |
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93 | <varlistentry> |
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94 | <term><property>agent.description</property></term> |
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95 | <listitem> |
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96 | <para> |
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97 | Optional. A description of the job agent. This is only used when |
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98 | registering the job agent. |
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99 | </para> |
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100 | </listitem> |
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101 | </varlistentry> |
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102 | </variablelist> |
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103 | |
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104 | </simplesect> |
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105 | |
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106 | <simplesect id="appendix.jobagent.properties.jobagent"> |
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107 | <title>Job agent server settings</title> |
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108 | |
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109 | <para> |
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110 | This section describes the configuration parameters that |
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111 | affect the job agent server itself. |
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112 | </para> |
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113 | |
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114 | <variablelist> |
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115 | <varlistentry> |
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116 | <term><property>agent.port</property></term> |
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117 | <listitem> |
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118 | <para> |
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119 | Optional. The port the job agent listens to for control requests. |
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120 | Control requests are used for starting, stopping, pausing and getting |
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121 | status information from the job agent. It is also used by the |
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122 | <command>jobagent.sh</command> script to control |
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123 | the local job agent. The default value is 47822. |
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124 | </para> |
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125 | </listitem> |
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126 | </varlistentry> |
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127 | |
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128 | <varlistentry> |
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129 | <term><property>agent.remotecontrol</property></term> |
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130 | <listitem> |
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131 | <para> |
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132 | Optional. A comma-separated list of ip addresses or names of |
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133 | computers that are allowed to send control requests to the job |
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134 | agent. If no value is specified, only the local host is allowed |
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135 | to connect. It is recommended that the web server is added to |
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136 | the list if the job agent is not running on the same server as |
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137 | the web server. |
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138 | </para> |
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139 | </listitem> |
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140 | </varlistentry> |
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141 | |
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142 | <varlistentry> |
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143 | <term><property>agent.allowremote.stop</property></term> |
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144 | <listitem> |
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145 | <para> |
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146 | Optional. If the <command>stop</command> command should be |
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147 | accepted from remote hosts specified in the <property>agent.remotecontrol</property> setting. |
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148 | If <constant>false</constant>, which is the default value, |
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149 | only the local host is allowed to stop the job agent. |
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150 | </para> |
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151 | |
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152 | <note> |
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153 | <para> |
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154 | Once the job agent has been stopped it can't be started |
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155 | by remote control. You must use the <command>jobagent.sh</command> |
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156 | script for this. |
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157 | </para> |
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158 | </note> |
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159 | |
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160 | </listitem> |
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161 | </varlistentry> |
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162 | |
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163 | <varlistentry> |
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164 | <term><property>agent.allowremote.start</property></term> |
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165 | <listitem> |
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166 | <para> |
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167 | Optional. If the <command>start</command> command should be |
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168 | accepted from remote hosts specified in the <property>agent.remotecontrol</property> setting. |
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169 | If <constant>false</constant>, only the local host is allowed to |
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170 | start the job agent. The default value is <constant>true</constant>. |
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171 | </para> |
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172 | </listitem> |
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173 | </varlistentry> |
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174 | |
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175 | <varlistentry> |
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176 | <term><property>agent.allowremote.pause</property></term> |
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177 | <listitem> |
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178 | <para> |
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179 | Optional. If the <command>pause</command> command should be |
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180 | accepted from remote hosts specified in the <property>agent.remotecontrol</property> setting. |
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181 | If <constant>false</constant>, only the local host is allowed to |
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182 | pause the job agent. The default value is <constant>true</constant>. |
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183 | </para> |
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184 | </listitem> |
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185 | </varlistentry> |
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186 | </variablelist> |
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187 | |
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188 | </simplesect> |
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189 | |
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190 | <simplesect id="appendix.jobagent.properties.execution"> |
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191 | <title>Job execution settings</title> |
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192 | |
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193 | <para> |
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194 | This section describes the configuration parameters that |
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195 | affect the execution of jobs. |
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196 | </para> |
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197 | |
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198 | <variablelist> |
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199 | <varlistentry> |
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200 | <term><property>agent.executor.class</property></term> |
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201 | <listitem> |
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202 | <para> |
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203 | The name of the Java class that handles the actual execution of jobs. |
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204 | The default implementation for a job agent ships three |
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205 | implementations: |
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206 | |
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207 | <itemizedlist> |
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208 | <listitem> |
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209 | <para> |
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210 | <classname>net.sf.basedb.clients.jobagent.executors.ProcessJobExecutor</classname>: |
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211 | Executes the job in an |
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212 | external process. This is the recommended executor and is the default |
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213 | choice if no value has been specified. With this executor a |
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214 | misbehaving plugin doesn't affect the job agent or other jobs. |
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215 | The drawback is that since a new virtual machine has to be started, |
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216 | more memory is required and the startup time can be long. |
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217 | </para> |
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218 | </listitem> |
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219 | |
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220 | <listitem> |
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221 | <para> |
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222 | <classname>net.sf.basedb.clients.jobagent.executors.ThreadJobExecutor</classname>: |
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223 | Executes the job in a separate thread. This is only recommended |
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224 | for plugins that are trusted and safe. A misbehaving plugin can affect the job agent |
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225 | and other jobs, but the statup time is short and less memory |
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226 | is used. |
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227 | </para> |
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228 | </listitem> |
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229 | |
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230 | <listitem> |
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231 | <para> |
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232 | <classname>net.sf.basedb.clients.jobagent.executors.DummyJobExecutor</classname>: |
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233 | Doesn't execute the job. It only marks the job as beeing executed, |
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234 | and after waiting some time, as finished successfully. |
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235 | Use it for debugging the job agent. |
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236 | </para> |
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237 | </listitem> |
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238 | </itemizedlist> |
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239 | |
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240 | It is possible to create your own implemetnation of a job executor. |
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241 | Create a class that implements the |
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242 | <interfacename>net.sf.basedb.clients.jobagent.JobExecutor</interfacename> |
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243 | interface. |
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244 | </para> |
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245 | </listitem> |
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246 | </varlistentry> |
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247 | |
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248 | <varlistentry> |
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249 | <term><property>agent.executor.process.java</property></term> |
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250 | <listitem> |
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251 | <para> |
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252 | Optional. The path to the Java executable used by the |
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253 | <classname>ProcessJobExecutor</classname>. If not specified the |
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254 | <envar>JAVA_HOME</envar> environment variable will be checked. |
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255 | As a last resort <command>java</command> is used without path |
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256 | information to let the operating system find the default |
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257 | installation. |
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258 | </para> |
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259 | </listitem> |
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260 | </varlistentry> |
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261 | |
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262 | <varlistentry> |
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263 | <term><property>agent.executor.process.options</property></term> |
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264 | <listitem> |
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265 | <para> |
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266 | Optional. Additional command line options to the Java executable. |
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267 | Do not add memory options (<option>-Mx</option> or |
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268 | <option>-Ms</option>), it will be added automatically by the |
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269 | executor. This setting is used by the |
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270 | <classname>ProcessJobExecutor</classname> only. |
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271 | </para> |
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272 | </listitem> |
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273 | </varlistentry> |
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274 | |
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275 | <varlistentry> |
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276 | <term><property>agent.executor.dummy.wait</property></term> |
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277 | <listitem> |
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278 | <para> |
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279 | Optional. Number of seconds the <classname>DummyJobExecutor</classname> should |
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280 | wait before returning from the "job execution". The executor first sets |
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281 | the progress to 50% then waits the specified number of seconds before |
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282 | setting the job to completed. If no value is specified it returns immediately. |
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283 | </para> |
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284 | </listitem> |
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285 | </varlistentry> |
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286 | |
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287 | <varlistentry> |
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288 | <term><property>agent.checkinterval</property></term> |
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289 | <listitem> |
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290 | <para> |
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291 | Optional. Number of seconds between checks to the database |
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292 | for jobs that are waiting for execution. The default value |
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293 | is 30 seconds. |
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294 | </para> |
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295 | </listitem> |
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296 | </varlistentry> |
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297 | |
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298 | </variablelist> |
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299 | </simplesect> |
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300 | |
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301 | <simplesect id="appendix.jobagent.properties.slots"> |
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302 | <title>Slots and priorities</title> |
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303 | |
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304 | <para> |
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305 | The job agent doesn't execute any number of jobs at the same time. |
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306 | This would sooner or later break the server. Instead, it uses a |
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307 | simple system with four different slots. Each slot is reserved for |
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308 | jobs that are estimated to be finished in a certain amount of time. |
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309 | The exception is that a quick job may use a slot with longer expected time |
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310 | since that will not block the slot very long. |
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311 | </para> |
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312 | |
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313 | <para> |
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314 | With each slot is also associated a thread priority. The priority |
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315 | is a value between 1 and 10 as defined by the |
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316 | <ulink url="http://java.sun.com/j2se/1.5.0/docs/api/java/lang/Thread.html" |
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317 | ><classname>java.lang.Thread</classname></ulink> class. |
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318 | </para> |
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319 | |
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320 | <informaltable frame="all" align="center"> |
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321 | <tgroup cols="3"> |
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322 | <colspec colname="property" /> |
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323 | <colspec colname="default" align="center"/> |
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324 | <colspec colname="time" /> |
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325 | <thead> |
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326 | <row> |
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327 | <entry>Property</entry> |
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328 | <entry>Default value</entry> |
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329 | <entry>Estimated execution time</entry> |
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330 | </row> |
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331 | </thead> |
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332 | |
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333 | <tbody> |
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334 | <row> |
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335 | <entry>agent.shortest.slots</entry> |
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336 | <entry>1</entry> |
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337 | <entry morerows="1">< 1 minute</entry> |
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338 | </row> |
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339 | <row> |
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340 | <entry>agent.shortest.priority</entry> |
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341 | <entry>4</entry> |
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342 | </row> |
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343 | <row> |
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344 | <entry>agent.short.slots</entry> |
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345 | <entry>1</entry> |
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346 | <entry morerows="1">< 10 minutes</entry> |
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347 | </row> |
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348 | <row> |
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349 | <entry>agent.short.priority</entry> |
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350 | <entry>4</entry> |
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351 | </row> |
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352 | <row> |
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353 | <entry>agent.medium.slots</entry> |
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354 | <entry>2</entry> |
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355 | <entry morerows="1">< 1 hour</entry> |
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356 | </row> |
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357 | <row> |
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358 | <entry>agent.medium.priority</entry> |
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359 | <entry>3</entry> |
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360 | </row> |
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361 | <row> |
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362 | <entry>agent.long.slots</entry> |
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363 | <entry>2</entry> |
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364 | <entry morerows="1">> 1 hour</entry> |
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365 | </row> |
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366 | <row> |
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367 | <entry>agent.long.priority</entry> |
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368 | <entry>3</entry> |
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369 | </row> |
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370 | </tbody> |
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371 | </tgroup> |
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372 | </informaltable> |
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373 | |
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374 | |
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375 | </simplesect> |
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376 | |
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377 | |
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378 | </appendix> |
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379 | |
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