source: trunk/src/core/net/sf/basedb/core @ 4383

Name Size Rev Age Author Last Change
../
authentication 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
data 4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
dbengine 4317   15 years Nicklas Nordborg Fixes #1022: Add support for using regular expressions in queries
doc-files 1538   18 years Nicklas Nordborg Implemented delete operation for BioAssaySet?, Transformation and VirtualDb?
dtd 4336   15 years Martin Svensson Fixes #1049 Add the 'quadratic mean' to available Avg. method's for …
filehandler 4026   16 years Martin Svensson References #847 Updated some javadocs. Complemented with tags for some …
hibernate 3900   16 years Nicklas Nordborg Fixes #612: Add checks in the core so that unsaved objects are not …
plugin 4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
query 4383   15 years Martin Svensson Fixed javadoc warnings
signal 4139   16 years Nicklas Nordborg Fixed Javadoc warnings
templates 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
xsd 4221   15 years Nicklas Nordborg References #988: Add support for servlets in extensions The main …
AbsoluteProgressReporter.java 1.6 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
AbstractBatcher.java 5.6 KB 3775   16 years Johan Enell Merged the 2.4.2 release log:branches/2.4-stable#3694:3770
AbstractEntityQuery.java 14.0 KB 4358   15 years Nicklas Nordborg Fixes #1075: Lowess normaliztion fails on trunk but works on latest …
AbstractQuery.java 23.9 KB 4358   15 years Nicklas Nordborg Fixes #1075: Lowess normaliztion fails on trunk but works on latest …
AbstractResultList.java 3.5 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
AbstractSqlQuery.java 10.8 KB 4126   16 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
AccessControlled.java 2.2 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
AccountExpiredException.java 1.5 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
Affymetrix.java 13.5 KB 4118   16 years Nicklas Nordborg References #636: Kill a running job Implemented support for …
AlreadyLoggedInException.java 1.4 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
Annotatable.java 3.0 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
AnnotatableProxy.java 2.0 KB 3979   16 years Nicklas Nordborg Fixes #828: Raw data importer should be able to set annotations on the …
AnnotatedItem.java 2.7 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
Annotation.java 9.5 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
AnnotationBetweenRestriction.java 3.8 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
AnnotationInRestriction.java 3.3 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
AnnotationRestriction.java 9.4 KB 4252   15 years Nicklas Nordborg Fixes #1006: Make it possible to search for missing annotations
AnnotationSet.java 23.0 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
AnnotationSimpleRestriction.java 9.0 KB 4252   15 years Nicklas Nordborg Fixes #1006: Make it possible to search for missing annotations
AnnotationType.java 37.4 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
AnnotationTypeCategory.java 4.3 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
AnyToAny.java 17.5 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
Application.java 30.4 KB 4319   15 years Nicklas Nordborg Fixes #1040: Exceptions when stopping Tomcat
ArrayBatch.java 8.7 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
ArrayDesign.java 25.6 KB 4305   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
ArrayDesignBlock.java 11.0 KB 4240   15 years Nicklas Nordborg Fixes #999: PrintMapImporter? should import feature diameter from TAM …
ArrayDesignPlate.java 5.3 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ArraySlide.java 8.9 KB 4220   15 years Nicklas Nordborg Fixes #955: Array slides – make test for barcode uniqueness
BaseException.java 2.8 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
BasicBatcher.java 18.9 KB 3775   16 years Johan Enell Merged the 2.4.2 release log:branches/2.4-stable#3694:3770
BasicChildItem.java 3.3 KB 3820   16 years Nicklas Nordborg Merged branches/filedb into trunk.
BasicItem.java 16.1 KB 4011   16 years Martin Svensson References #847 Updated some javadocs. Removed an exception, that is …
BatchedPropertyInfo.java 1.6 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Batcher.java 2.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
BatchUtil.java 16.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
BioAssay.java 13.1 KB 4335   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
BioAssaySet.java 49.8 KB 4334   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
BioMaterial.java 2.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
BioMaterialEvent.java 27.4 KB 4131   16 years Nicklas Nordborg Fixes #868: Support for chips with multiple arrays
BioSource.java 5.5 KB 4017   16 years Martin Svensson References #847 Updated some javadocs.
BlockInfo.java 3.9 KB 4109   16 years Martin Svensson References #894 Allow 0 as a block number in BlockInfo?
BooleanParameterType.java 2.4 KB 4026   16 years Martin Svensson References #847 Updated some javadocs. Complemented with tags for some …
ChildItem.java 3.8 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Client.java 9.6 KB 4017   16 years Martin Svensson References #847 Updated some javadocs.
ClientDefaultSetting.java 5.8 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Coloring.java 5.3 KB 4026   16 years Martin Svensson References #847 Updated some javadocs. Complemented with tags for some …
CommonItem.java 2.4 KB 3974   16 years Nicklas Nordborg References #827: Add more web services methods Added Transferable and …
Config.java 6.1 KB 4096   16 years Nicklas Nordborg Fixes #902: Support for multiple configuration files for raw data …
ConfigurationException.java 1.4 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
ConnectionClosedException.java 1.3 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
ContextKey.java 2.1 KB 3948   16 years Nicklas Nordborg References #746. * Fixes links going from javadoc to docbook. * …
Controlled.java 1.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DatabaseException.java 2.0 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
DataCube.java 19.2 KB 4124   16 years Nicklas Nordborg Fixes #915: NullPointerException? when a raw data type is missing Use …
DataCubeColumn.java 5.3 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DataCubeExtraValue.java 7.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DataCubeFilter.java 5.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DataCubeLayer.java 5.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DataFileType.java 20.5 KB 4334   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
DataQuery.java 4.2 KB 4305   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
DataResultIterator.java 3.6 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DateParameterType.java 2.9 KB 4026   16 years Martin Svensson References #847 Updated some javadocs. Complemented with tags for some …
DateUtil.java 3.3 KB 4026   16 years Martin Svensson References #847 Updated some javadocs. Complemented with tags for some …
DbControl.java 34.0 KB 4017   16 years Martin Svensson References #847 Updated some javadocs.
DetachedItemException.java 1.5 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
Directory.java 22.7 KB 4314   15 years Nicklas Nordborg Fixes #967: Assign the parent directory permissions to new …
DisallowedValueException.java 1.9 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
DiskConsumable.java 2.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DiskUsage.java 6.3 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DiskUsageStatistics.java 8.6 KB 3857   16 years Jari Häkkinen Merged patch release 2.4.4 to the trunk. Delta 2.4.4 - 2.4.3
DoubleParameterType.java 4.8 KB 4026   16 years Martin Svensson References #847 Updated some javadocs. Complemented with tags for some …
DynamicExtraValueQuery.java 2.2 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DynamicJoin.java 6.3 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DynamicPositionQuery.java 4.1 KB 4017   16 years Martin Svensson References #847 Updated some javadocs.
DynamicQuery.java 2.7 KB 4358   15 years Nicklas Nordborg Fixes #1075: Lowess normaliztion fails on trunk but works on latest …
DynamicRawDataQuery.java 3.0 KB 4255   15 years Jari Häkkinen Typo.
DynamicReporterQuery.java 2.1 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
DynamicRestriction.java 3.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
DynamicResultIterator.java 5.0 KB 4126   16 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
DynamicSpotQuery.java 7.4 KB 4017   16 years Martin Svensson References #847 Updated some javadocs.
DynamicSpotQueryJoiners.java 7.1 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
Experiment.java 24.9 KB 4341   15 years Nicklas Nordborg Fixes #1056: Disk usage does not seem to report disk usage properly …
ExtendedProperties.java 9.2 KB 4117   16 years Nicklas Nordborg References #902: Support for multiple configuration files for raw data …
ExtendedProperty.java 9.3 KB 4026   16 years Martin Svensson References #847 Updated some javadocs. Complemented with tags for some …
ExtendedPropertyAccessor.java 6.0 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
ExtendedPropertyLinker.java 2.1 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
Extract.java 7.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ExtraValue.java 16.9 KB 4334   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
ExtraValueExpression.java 2.8 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ExtraValueJoin.java 6.5 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ExtraValueType.java 10.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Feature.java 3.4 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
FeatureBatcher.java 10.2 KB 4257   15 years Nicklas Nordborg References #1009: Link from array design to job that imported the …
FeatureCoordinate.java 3.5 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
FeatureIdentificationMethod.java 5.5 KB 4083   16 years Nicklas Nordborg References #894: Support for array designs with other feature …
File.java 39.7 KB 4314   15 years Nicklas Nordborg Fixes #967: Assign the parent directory permissions to new …
FileAttachable.java 1.8 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
FileParameterType.java 2.3 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
FileSet.java 19.6 KB 4128   16 years Nicklas Nordborg References #636: Kill a running job Support for interruption in some …
FileSetMember.java 6.3 KB 4017   16 years Martin Svensson References #847 Updated some javadocs.
FileStoreEnabled.java 2.6 KB 3820   16 years Nicklas Nordborg Merged branches/filedb into trunk.
FileStoreUtil.java 8.2 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
FileType.java 7.4 KB 4334   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
filter-def.hbm.xml 5.5 KB 3905   16 years Nicklas Nordborg Fixes #810: Implement query options for Include.ANNOTATED and …
FilterBatcher.java 10.8 KB 4126   16 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
FloatParameterType.java 4.1 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
Formula.java 20.4 KB 4336   15 years Martin Svensson Fixes #1049 Add the 'quadratic mean' to available Avg. method's for …
GlobalDefaultSetting.java 3.5 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Group.java 18.0 KB 4232   15 years Nicklas Nordborg Merged patch release 2.6.2 to the trunk. Delta 2.6.2 - 2.6.1
GroupPermissions.java 6.1 KB 4141   16 years Nicklas Nordborg Fixes #929: An existing share to Everyone may block sharing an item to …
Hardware.java 9.7 KB 4020   16 years Martin Svensson References #847 Updated some javadocs.
HardwareType.java 7.8 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
HasAnnotationRestriction.java 2.7 KB 4252   15 years Nicklas Nordborg Fixes #1006: Make it possible to search for missing annotations
Help.java 6.8 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
HibernateUtil.java 57.7 KB 4317   15 years Nicklas Nordborg Fixes #1022: Add support for using regular expressions in queries
HqlQueryJoiners.java 3.6 KB 4302   15 years Nicklas Nordborg References #1016: Filter table using a reporter list I think this …
Hybridization.java 10.7 KB 4134   16 years Nicklas Nordborg Fixes #921: Experiment overview should be updated with support for …
Identifiable.java 2.0 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Image.java 9.1 KB 4020   16 years Martin Svensson References #847 Updated some javadocs.
Include.java 2.6 KB 3888   16 years Nicklas Nordborg References #707: Can't unlink items that have been put in the trashcan …
Install.java 91.5 KB 4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
IntegerParameterType.java 4.2 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
IntegerUtil.java 4.1 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
IntensityFormula.java 2.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
InternalJobQueue.java 17.0 KB 4311   15 years Nicklas Nordborg Fixes #1024: Allow users to select a specific job-agent when creating …
InternalStorageController.java 10.4 KB 3857   16 years Jari Häkkinen Merged patch release 2.4.4 to the trunk. Delta 2.4.4 - 2.4.3
InvalidAnnotationException.java 1.8 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
InvalidDataException.java 2.0 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
InvalidPasswordException.java 1.4 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
InvalidPathException.java 1.3 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
InvalidRelationException.java 2.1 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
InvalidUseOfNullException.java 1.6 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
Item.java 24.3 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
ItemAlreadyExistsException.java 1.5 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
ItemContext.java 40.3 KB 4302   15 years Nicklas Nordborg References #1016: Filter table using a reporter list I think this …
ItemInUseException.java 2.0 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
ItemKey.java 15.7 KB 4141   16 years Nicklas Nordborg Fixes #929: An existing share to Everyone may block sharing an item to …
ItemModifiedException.java 2.6 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
ItemNotFoundException.java 1.5 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
ItemParameterType.java 2.5 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
ItemProxy.java 2.3 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
ItemQuery.java 3.9 KB 3857   16 years Jari Häkkinen Merged patch release 2.4.4 to the trunk. Delta 2.4.4 - 2.4.3
ItemResultIterator.java 3.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ItemResultList.java 7.2 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Job.java 61.4 KB 4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
JobAgent.java 17.4 KB 4311   15 years Nicklas Nordborg Fixes #1024: Allow users to select a specific job-agent when creating …
JobAgentSettings.java 11.7 KB 4113   16 years Nicklas Nordborg Fixes #913: Plug-in JAR paths should support paths relative to the …
Key.java 1.2 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Keyring.java 26.5 KB 3857   16 years Jari Häkkinen Merged patch release 2.4.4 to the trunk. Delta 2.4.4 - 2.4.3
Label.java 4.6 KB 4020   16 years Martin Svensson References #847 Updated some javadocs.
LabeledExtract.java 8.0 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
Location.java 2.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
LogUtil.java 1.8 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
LongParameterType.java 4.1 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
MappingBatcher.java 9.1 KB 4126   16 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
MeanRawDataPropertyExpression.java 3.0 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
MeasuredBioMaterial.java 9.0 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
Message.java 9.7 KB 4040   16 years Martin Svensson Fixes #847 Most of the missing javadocs tags have been added in the …
Metadata.java 11.7 KB 4339   15 years Nicklas Nordborg Fixes #1058: Metadata.getPropertyValue() fails to get value for the …
MimeType.java 9.4 KB 4020   16 years Martin Svensson References #847 Updated some javadocs.
MultiPermissions.java 16.9 KB 4312   15 years Nicklas Nordborg Fixes #981: Share all subdirectories and files when sharing a directory
Nameable.java 3.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
NameableUtil.java 2.1 KB 4040   16 years Martin Svensson Fixes #847 Most of the missing javadocs tags have been added in the …
News.java 8.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
NotLoggedInException.java 1.3 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
NumberOutOfRangeException.java 4.5 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
Operator.java 9.5 KB 4317   15 years Nicklas Nordborg Fixes #1022: Add support for using regular expressions in queries
Ownable.java 2.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
OwnableUtil.java 1.6 KB 4040   16 years Martin Svensson Fixes #847 Most of the missing javadocs tags have been added in the …
OwnedItem.java 3.8 KB 4284   15 years Nicklas Nordborg Merged patch release 2.6.3 to the trunk. Delta: tags/2.6.3 - tags/2.6.2
package.html 945 bytes 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ParameterException.java 1.4 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
ParameterInfo.java 1.7 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
ParameterType.java 8.6 KB 4040   16 years Martin Svensson Fixes #847 Most of the missing javadocs tags have been added in the …
ParameterValuesImpl.java 6.6 KB 3789   16 years Johan Enell Merged the 2.4.3 release log:branches/2.4-stable#3771:3788
Path.java 7.7 KB 3789   16 years Johan Enell Merged the 2.4.3 release log:branches/2.4-stable#3771:3788
PathParameterType.java 3.2 KB 3789   16 years Johan Enell Merged the 2.4.3 release log:branches/2.4-stable#3771:3788
Permission.java 8.0 KB 4311   15 years Nicklas Nordborg Fixes #1024: Allow users to select a specific job-agent when creating …
PermissionDeniedException.java 2.9 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
Plate.java 15.2 KB 4305   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
PlateEvent.java 11.0 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
PlateEventType.java 10.0 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
PlateGeometry.java 8.6 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
PlateMapping.java 16.5 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
PlateType.java 6.8 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Platform.java 15.9 KB 4020   16 years Martin Svensson References #847 Updated some javadocs.
PlatformFileType.java 7.1 KB 3820   16 years Nicklas Nordborg Merged branches/filedb into trunk.
PlatformVariant.java 13.6 KB 4040   16 years Martin Svensson Fixes #847 Most of the missing javadocs tags have been added in the …
PluginConfiguration.java 21.9 KB 4254   15 years Nicklas Nordborg Fixes #972: Assign job to experiment when the job is created The …
PluginConfigurationRequest.java 5.3 KB 4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
PluginDefinition.java 42.8 KB 4122   16 years Nicklas Nordborg References #913: Plug-in JAR paths should support paths relative to …
PluginExecutionRequest.java 4.9 KB 4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
PluginParameter.java 5.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
PluginPermission.java 1.1 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
PluginRequest.java 9.6 KB 4379   15 years Nicklas Nordborg References #1082: Make it possible to re-enter parameters for a failed …
PluginResponse.java 8.9 KB 4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
PluginSessionControl.java 2.9 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
PluginType.java 9.2 KB 4020   16 years Martin Svensson References #847 Updated some javadocs.
PositionBatcher.java 8.6 KB 4126   16 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
PositionExtraValueBatcher.java 12.2 KB 4126   16 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
PredefinedQuery.java 4.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Presets.java 7.7 KB 4187   16 years Nicklas Nordborg Merged extensions branch into trunk
ProgressReporter.java 1.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Project.java 23.9 KB 4383   15 years Martin Svensson Fixed javadoc warnings
ProjectKey.java 11.5 KB 4020   16 years Martin Svensson References #847 Updated some javadocs.
ProjectPermissions.java 6.8 KB 4141   16 years Nicklas Nordborg Fixes #929: An existing share to Everyone may block sharing an item to …
PropertyFilter.java 15.6 KB 4302   15 years Nicklas Nordborg References #1016: Filter table using a reporter list I think this …
Protocol.java 12.0 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ProtocolType.java 9.5 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
QueryExecutor.java 9.7 KB 4243   15 years Nicklas Nordborg Fixes #920: Add support for aborting queries using a StatlessSession?
QueryRuntimeFilter.java 2.6 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
QueryRuntimeFilterFactory.java 15.9 KB 3905   16 years Nicklas Nordborg Fixes #810: Implement query options for Include.ANNOTATED and …
QueryRuntimeFilterManager.java 2.6 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Quota.java 13.0 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
QuotaException.java 2.1 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
QuotaType.java 5.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
RawBioAssay.java 41.5 KB 4305   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
RawDataBatcher.java 20.3 KB 4256   15 years Nicklas Nordborg References #974: Link from raw bioassay to job that imported the raw …
RawDataProperty.java 1.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
RawDataPropertyExpression.java 4.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
RawDataType.java 10.1 KB 3867   16 years Nicklas Nordborg References #721: Store data in files instead of in the database * …
RawDataTypes.java 16.4 KB 4124   16 years Nicklas Nordborg Fixes #915: NullPointerException? when a raw data type is missing Use …
RawDataUtil.java 2.5 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
RealJoin.java 4.9 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
RealTable.java 2.8 KB 4302   15 years Nicklas Nordborg References #1016: Filter table using a reporter list I think this …
Removable.java 2.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Reporter.java 7.2 KB 4306   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
ReporterBatcher.java 8.6 KB 4082   16 years Nicklas Nordborg Fixes #879: Add column holding the filename of last file used for …
ReporterList.java 21.8 KB 4383   15 years Martin Svensson Fixed javadoc warnings
ReporterListJoin.java 5.8 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
ReporterPropertyExpression.java 3.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ReporterScore.java 2.3 KB 2428   17 years Nicklas Nordborg References #272: Make rest of web gui user-friendly Updated pages for …
ReporterScoreQuery.java 2.5 KB 4243   15 years Nicklas Nordborg Fixes #920: Add support for aborting queries using a StatlessSession?
ReporterScoreResultIterator.java 3.0 KB 2474   17 years Nicklas Nordborg Fixes #263: Update to latest versions of 3rd-party software * Log4j: …
ReporterType.java 6.6 KB 4020   16 years Martin Svensson References #847 Updated some javadocs.
RequestInformation.java 4.5 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
Role.java 11.2 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
RoleKey.java 7.5 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Sample.java 7.5 KB 4023   16 years Martin Svensson References #847 Updated some javadocs. Most of the thrown exceptions …
Scan.java 11.6 KB 4023   16 years Martin Svensson References #847 Updated some javadocs. Most of the thrown exceptions …
ScrollIterator.java 2.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
SecondaryStorageController.java 3.2 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Session.java 5.6 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
SessionControl.java 62.0 KB 4376   15 years Nicklas Nordborg Fixes #1066: Reset all filters functionality request
Setting.java 4.5 KB 4034   16 years Martin Svensson References #847 Updated some javadocs. Added some missing tags.
Shareable.java 3.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
ShareableUtil.java 7.4 KB 4314   15 years Nicklas Nordborg Fixes #967: Assign the parent directory permissions to new …
SharedItem.java 3.6 KB 4142   16 years Nicklas Nordborg Fixes #931: Share items to EVERYONE without SHARE_TO_EVERYONE permission
SimpleAbsoluteProgressReporter.java 2.0 KB 3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
SimpleProgressReporter.java 2.3 KB 3719   16 years Nicklas Nordborg References #411: Most of the basic functionality is now in place and …
Software.java 7.0 KB 4023   16 years Martin Svensson References #847 Updated some javadocs. Most of the thrown exceptions …
SoftwareType.java 6.7 KB 4023   16 years Martin Svensson References #847 Updated some javadocs. Most of the thrown exceptions …
SpotBatcher.java 11.4 KB 4126   16 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
SpotExtraValueBatcher.java 12.0 KB 4284   15 years Nicklas Nordborg Merged patch release 2.6.3 to the trunk. Delta: tags/2.6.3 - tags/2.6.2
SpotImage.java 1.9 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
SpotImages.java 31.1 KB 4232   15 years Nicklas Nordborg Merged patch release 2.6.2 to the trunk. Delta 2.6.2 - 2.6.1
StringParameterType.java 4.0 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
StringTooLongException.java 1.8 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
StringUtil.java 4.5 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
SystemItem.java 2.1 KB 3820   16 years Nicklas Nordborg Merged branches/filedb into trunk.
SystemItems.java 4.7 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Transactional.java 2.2 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Transformation.java 16.0 KB 4023   16 years Martin Svensson References #847 Updated some javadocs. Most of the thrown exceptions …
Trashcan.java 9.7 KB 4347   15 years Nicklas Nordborg Merged patch release 2.7.1 to the trunk
Type.java 14.2 KB 4347   15 years Nicklas Nordborg Merged patch release 2.7.1 to the trunk
UnmodifiableResultList.java 3.4 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
UnsavedItemException.java 2.1 KB 4084   16 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
Update.java 86.1 KB 4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
User.java 38.1 KB 4347   15 years Nicklas Nordborg Merged patch release 2.7.1 to the trunk
UserClientSetting.java 8.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
UserDefaultSetting.java 6.2 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
UserPermissions.java 6.0 KB 4141   16 years Nicklas Nordborg Fixes #929: An existing share to Everyone may block sharing an item to …
Validatable.java 1.4 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Values.java 4.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Version.java 3.0 KB 4030   16 years Nicklas Nordborg Fixes #858: Display database name when starting initdb and updatedb scripts
VirtualColumn.java 8.6 KB 4026   16 years Martin Svensson References #847 Updated some javadocs. Complemented with tags for some …
VirtualDb.java 13.8 KB 4126   16 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
VirtualTable.java 9.1 KB 3679   16 years Jari Häkkinen Changing the pesky "a (ä) character to a.
Well.java 9.7 KB 4023   16 years Martin Svensson References #847 Updated some javadocs. Most of the thrown exceptions …
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