| 1 | # $Id: initdb.sh,v 1.1 2004/10/27 15:37:21 nicklas Exp $ |
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| 2 | # |
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| 3 | # BioArray Software Environment (BASE) - http://base.thep.lu.se/ |
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| 4 | # Copyright (C) 2002-2004 Lao Saal, Carl Troein, |
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| 5 | # Johan Vallon-Christersson, Jari H�kinen, Nicklas Nordborg |
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| 6 | # |
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| 7 | # This file is part of BASE. |
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| 8 | # |
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| 9 | # BASE is free software; you can redistribute it and/or |
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| 10 | # modify it under the terms of the GNU General Public License |
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| 11 | # as published by the Free Software Foundation; either version 2 |
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| 12 | # of the License, or (at your option) any later version. |
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| 13 | # |
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| 14 | # BASE is distributed in the hope that it will be useful, |
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| 15 | # but WITHOUT ANY WARRANTY; without even the implied warranty of |
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| 16 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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| 17 | # GNU General Public License for more details. |
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| 18 | # |
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| 19 | # You should have received a copy of the GNU General Public License |
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| 20 | # along with this program; if not, write to the Free Software |
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| 21 | # Foundation, Inc., 59 Temple Place - Suite 330, |
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| 22 | # Boston, MA 02111-1307, USA. |
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| 23 | # ---------------------------------------- |
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| 24 | |
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| 25 | WEBINF=../www/WEB-INF |
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| 26 | |
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| 27 | # Set up the classpath |
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| 28 | CP=. |
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| 29 | |
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| 30 | # Base2 configuration |
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| 31 | CP=$CP:$WEBINF/classes |
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| 32 | |
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| 33 | # Base2 core & installation |
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| 34 | CP=$CP:BASE2Install.jar |
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| 35 | CP=$CP:$WEBINF/lib/BASE2Core.jar |
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| 36 | |
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| 37 | # Hibernate |
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| 38 | CP=$CP:$WEBINF/lib/hibernate3.jar |
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| 39 | CP=$CP:$WEBINF/lib/cglib-full-2.0.2.jar |
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| 40 | CP=$CP:$WEBINF/lib/commons-collections-2.1.1.jar |
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| 41 | CP=$CP:$WEBINF/lib/commons-logging-1.0.4.jar |
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| 42 | CP=$CP:$WEBINF/lib/dom4j-1.5.2.jar |
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| 43 | CP=$CP:$WEBINF/lib/ehcache-1.1.jar |
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| 44 | CP=$CP:$WEBINF/lib/jta.jar |
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| 45 | CP=$CP:$WEBINF/lib/odmg.jar |
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| 46 | CP=$CP:$WEBINF/lib/log4j-1.2.9.jar |
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| 47 | CP=$CP:$WEBINF/lib/antlr-2.7.4.jar |
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| 48 | |
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| 49 | # MySQL JDBC driver |
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| 50 | CP=$CP:$WEBINF/lib/mysql-connector-java-3.0.15-ga-bin.jar |
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| 51 | |
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| 52 | # SQL Server JDBC driver |
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| 53 | # CP=$CP:$WEBINF/lib/jtds-0.8.1.jar |
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| 54 | |
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| 55 | # Postgres JDBC driver |
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| 56 | # CP=$CP:$WEBINF/lib/postgresql.jar |
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| 57 | |
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| 58 | # Xerces XML parser |
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| 59 | CP=$CP:$WEBINF/lib/xerces-2.6.2.jar |
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| 60 | CP=$CP:$WEBINF/lib/xml-apis.jar |
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| 61 | |
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| 62 | # Java Advanced Imaging |
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| 63 | CP=$CP:$WEBINF/lib/jai_codec.jar |
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| 64 | CP=$CP:$WEBINF/lib/jai_core.jar |
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| 65 | CP=$CP:$WEBINF/lib/mlibwrapper_jai.jar |
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| 66 | |
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| 67 | # Execute install class |
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| 68 | java -cp $CP net.sf.basedb.install.InitDB $* |
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