| 1 | # $Id: run.sh,v 1.6 2004/10/27 15:39:47 nicklas Exp $ |
|---|
| 2 | # |
|---|
| 3 | # BioArray Software Environment (BASE) - http://base.thep.lu.se/ |
|---|
| 4 | # Copyright (C) 2002-2004 Lao Saal, Carl Troein, |
|---|
| 5 | # Johan Vallon-Christersson, Jari H�kkinen, Nicklas Nordborg |
|---|
| 6 | # |
|---|
| 7 | # This file is part of BASE. |
|---|
| 8 | # |
|---|
| 9 | # BASE is free software; you can redistribute it and/or |
|---|
| 10 | # modify it under the terms of the GNU General Public License |
|---|
| 11 | # as published by the Free Software Foundation; either version 2 |
|---|
| 12 | # of the License, or (at your option) any later version. |
|---|
| 13 | # |
|---|
| 14 | # BASE is distributed in the hope that it will be useful, |
|---|
| 15 | # but WITHOUT ANY WARRANTY; without even the implied warranty of |
|---|
| 16 | # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
|---|
| 17 | # GNU General Public License for more details. |
|---|
| 18 | # |
|---|
| 19 | # You should have received a copy of the GNU General Public License |
|---|
| 20 | # along with this program; if not, write to the Free Software |
|---|
| 21 | # Foundation, Inc., 59 Temple Place - Suite 330, |
|---|
| 22 | # Boston, MA 02111-1307, USA. |
|---|
| 23 | # ---------------------------------------- |
|---|
| 24 | |
|---|
| 25 | # Set up the classpath |
|---|
| 26 | CP=. |
|---|
| 27 | |
|---|
| 28 | # Base2 core |
|---|
| 29 | CP=$CP:../core |
|---|
| 30 | |
|---|
| 31 | # Hibernate |
|---|
| 32 | CP=$CP:../../lib/compile/hibernate3.jar |
|---|
| 33 | CP=$CP:../../lib/dist/cglib-2.1.3.jar |
|---|
| 34 | CP=$CP:../../lib/dist/asm.jar |
|---|
| 35 | CP=$CP:../../lib/dist/asm-attrs.jar |
|---|
| 36 | CP=$CP:../../lib/dist/commons-collections-2.1.1.jar |
|---|
| 37 | CP=$CP:../../lib/dist/commons-logging-1.0.4.jar |
|---|
| 38 | CP=$CP:../../lib/dist/dom4j-1.6.1.jar |
|---|
| 39 | CP=$CP:../../lib/dist/ehcache-1.1.jar |
|---|
| 40 | CP=$CP:../../lib/dist/jta.jar |
|---|
| 41 | CP=$CP:../../lib/dist/antlr-2.7.6rc1.jar |
|---|
| 42 | |
|---|
| 43 | # Log4j logging system (also used by Hibernate) |
|---|
| 44 | CP=$CP:../../lib/compile/log4j-1.2.11.jar |
|---|
| 45 | |
|---|
| 46 | # C3P0 Connection pool manager |
|---|
| 47 | CP=$CP:../../lib/dist/c3p0-0.9.0.jar |
|---|
| 48 | |
|---|
| 49 | # MySQL JDBC driver |
|---|
| 50 | CP=$CP:../../lib/dist/mysql-connector-java-3.1.12-bin.jar |
|---|
| 51 | |
|---|
| 52 | # Postgres JDBC driver |
|---|
| 53 | CP=$CP:../../lib/dist/postgresql-8.0-313.jdbc3.jar |
|---|
| 54 | |
|---|
| 55 | # Oracle JDBC driver (experimental) |
|---|
| 56 | CP=$CP:../../lib/dist/ojdbc14.jar |
|---|
| 57 | |
|---|
| 58 | # JDOM and Xerces XML parser |
|---|
| 59 | CP=$CP:../../lib/compile/jdom.jar |
|---|
| 60 | CP=$CP:../../lib/dist/jaxen-1.1-beta-7.jar |
|---|
| 61 | CP=$CP:../../lib/dist/saxpath.jar |
|---|
| 62 | CP=$CP:../../lib/dist/xerces-2.6.2.jar |
|---|
| 63 | CP=$CP:../../lib/dist/xml-apis.jar |
|---|
| 64 | |
|---|
| 65 | # Java Advanced Imaging |
|---|
| 66 | CP=$CP:../../lib/compile/jai_codec.jar |
|---|
| 67 | CP=$CP:../../lib/compile/jai_core.jar |
|---|
| 68 | CP=$CP:../../lib/compile/mlibwrapper_jai.jar |
|---|
| 69 | |
|---|
| 70 | # Java Math Expression Parser |
|---|
| 71 | CP=$CP:../../lib/compile/jep-2.3.0.jar |
|---|
| 72 | |
|---|
| 73 | # JFreeChart |
|---|
| 74 | CP=$CP:../../lib/compile/jfreechart-1.0.0.jar |
|---|
| 75 | CP=$CP:../../lib/compile/jcommon-1.0.0.jar |
|---|
| 76 | |
|---|
| 77 | |
|---|
| 78 | # Execute test class |
|---|
| 79 | java -ea -server -cp $CP $* |
|---|
