source: trunk/www/biomaterials/samples/index.jsp @ 6695

Last change on this file since 6695 was 6695, checked in by Nicklas Nordborg, 8 years ago

References #1908: Batch inheriting multiple annotations

Added to list pages for samples, extracts, physical bioassays, derived bioassays and array lims.
  • Property svn:eol-style set to native
  • Property svn:keywords set to Date Id
File size: 20.7 KB
Line 
1<%-- $Id: index.jsp 6695 2015-01-28 06:59:57Z nicklas $
2  ------------------------------------------------------------------
3  Copyright (C) 2005 Nicklas Nordborg
4  Copyright (C) 2006 Jari Häkkinen, Nicklas Nordborg, Martin Svensson
5
6  This file is part of BASE - BioArray Software Environment.
7  Available at http://base.thep.lu.se/
8
9  BASE is free software; you can redistribute it and/or
10  modify it under the terms of the GNU General Public License
11  as published by the Free Software Foundation; either version 3
12  of the License, or (at your option) any later version.
13
14  BASE is distributed in the hope that it will be useful,
15  but WITHOUT ANY WARRANTY; without even the implied warranty of
16  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
17  GNU General Public License for more details.
18
19  You should have received a copy of the GNU General Public License
20  along with BASE. If not, see <http://www.gnu.org/licenses/>.
21  ------------------------------------------------------------------
22
23  @author Nicklas
24  @version 2.0
25--%>
26<%@ page pageEncoding="UTF-8" session="false"
27  import="net.sf.basedb.core.SessionControl"
28  import="net.sf.basedb.core.DbControl"
29  import="net.sf.basedb.core.Item"
30  import="net.sf.basedb.core.Include"
31  import="net.sf.basedb.core.Sample"
32  import="net.sf.basedb.core.BioSource"
33  import="net.sf.basedb.core.BioMaterialEvent"
34  import="net.sf.basedb.core.BioPlateEventType"
35  import="net.sf.basedb.core.BioWell"
36  import="net.sf.basedb.core.ItemSubtype"
37  import="net.sf.basedb.core.Extract"
38  import="net.sf.basedb.core.Protocol"
39  import="net.sf.basedb.core.ItemQuery"
40  import="net.sf.basedb.core.ItemResultIterator"
41  import="net.sf.basedb.core.Permission"
42  import="net.sf.basedb.core.ItemContext"
43  import="net.sf.basedb.core.MultiPermissions"
44  import="net.sf.basedb.core.OwnedItem"
45  import="net.sf.basedb.core.AnnotatedItem"
46  import="net.sf.basedb.core.PermissionDeniedException"
47  import="net.sf.basedb.core.ItemAlreadyExistsException"
48  import="net.sf.basedb.core.query.Hql"
49  import="net.sf.basedb.core.query.Orders"
50  import="net.sf.basedb.core.query.Restrictions"
51  import="net.sf.basedb.core.query.Expressions"
52  import="net.sf.basedb.util.RemovableUtil"
53  import="net.sf.basedb.util.ShareableUtil"
54  import="net.sf.basedb.util.OwnableUtil"
55  import="net.sf.basedb.clients.web.Base"
56  import="net.sf.basedb.clients.web.WebException"
57  import="net.sf.basedb.util.Values"
58  import="net.sf.basedb.clients.web.plugins.ParentBioMaterialLoader"
59  import="net.sf.basedb.clients.web.plugins.BioMaterialEventSourceFormatter"
60  import="net.sf.basedb.clients.web.plugins.ParentBioMaterialEventSourceLoader"
61  import="net.sf.basedb.clients.web.plugins.ItemQueryLoader"
62  import="net.sf.basedb.clients.web.util.HTML"
63  import="net.sf.basedb.util.formatter.Formatter"
64  import="net.sf.basedb.util.formatter.WellCoordinateFormatter"
65  import="net.sf.basedb.util.formatter.NameableFormatter"
66  import="net.sf.basedb.util.formatter.ItemTypeFormatter"
67  import="net.sf.basedb.clients.web.formatter.FormatterFactory"
68
69  import="net.sf.basedb.core.plugin.GuiContext"
70  import="net.sf.basedb.util.extensions.ExtensionsInvoker"
71  import="net.sf.basedb.clients.web.extensions.ExtensionsControl"
72  import="net.sf.basedb.clients.web.extensions.JspContext"
73  import="net.sf.basedb.clients.web.extensions.edit.EditUtil"
74  import="net.sf.basedb.clients.web.extensions.edit.OnSaveRenderer"
75  import="net.sf.basedb.clients.web.extensions.list.ListColumnExportRenderer"
76  import="net.sf.basedb.clients.web.extensions.list.ListColumnUtil"
77  import="java.util.Enumeration"
78  import="java.util.Set"
79  import="java.util.HashSet"
80  import="java.util.List"
81  import="java.util.ArrayList"
82  import="java.util.Collections"
83  import="java.util.Date"
84%>
85<%@ taglib prefix="base" uri="/WEB-INF/base.tld" %>
86<%!
87  private static final ItemContext defaultContext = Base.createDefaultContext("name", "name,itemSubtype,originalQuantity,remainingQuantity,extracts,description");
88  private static final Item itemType = Item.SAMPLE;
89 
90  private static void registerExportUtils(ItemContext cc)
91  {
92    // Register formatters
93    cc.setObject("export.formatter.bioWell.row", new WellCoordinateFormatter(true));
94    cc.setObject("export.formatter.bioWell.column", new WellCoordinateFormatter(false));
95    cc.setObject("export.formatter.&creationEvent.sources(bioMaterial.name)", new BioMaterialEventSourceFormatter());
96    cc.setObject("export.formatter.&childCreationEvents(event.bioMaterial.name)", new NameableFormatter());
97    cc.setObject("export.formatter.&children(name)", new NameableFormatter());
98    cc.setObject("export.formatter.parentType", new ItemTypeFormatter());
99   
100    // Register dataloaders
101    String sampleParameter = "sample";
102
103    // Child extracts
104    ItemQuery<Extract> extractQuery = Extract.getQuery();
105    extractQuery.include(cc.getInclude());
106    extractQuery.restrict(Restrictions.eq(Hql.property("parent"), Expressions.parameter(sampleParameter)));
107    extractQuery.order(Orders.asc(Hql.property("name")));
108    cc.setObject("export.dataloader.&children(name)", new ItemQueryLoader(extractQuery, sampleParameter));
109
110    // Child samples
111    ItemQuery<Sample> childSamplesQuery = Sample.getQuery();
112    childSamplesQuery.join(Hql.innerJoin("creationEvent", "ce"));
113    childSamplesQuery.join(Hql.innerJoin("ce", "sources", "src"));
114    childSamplesQuery.restrict(Restrictions.eq(Hql.property("src", "bioMaterial"), Expressions.parameter(sampleParameter)));
115    childSamplesQuery.order(Orders.asc(Hql.property("name")));
116    childSamplesQuery.include(cc.getInclude());
117    cc.setObject("export.dataloader.&childCreationEvents(event.bioMaterial.name)", new ItemQueryLoader(childSamplesQuery, sampleParameter));
118   
119    // Parent samples
120    cc.setObject("export.dataloader.&creationEvent.sources(bioMaterial.name)", new ParentBioMaterialEventSourceLoader());
121  } 
122%>
123<%
124final SessionControl sc = Base.getExistingSessionControl(pageContext, true);
125final String ID = sc.getId();
126final String cmd = request.getParameter("cmd");
127final String root = request.getContextPath()+"/";
128final String mode = request.getParameter("mode");
129final String callback = request.getParameter("callback");
130final String itemId = request.getParameter("item_id");
131final String listPage = "list_samples.jsp?ID="+ID
132  +(mode == null ? "" : "&mode="+mode)
133  +(callback == null ? "" : "&callback="+callback)
134  +(itemId == null ? "" : "&item_id="+itemId);
135final String viewPage = "view_sample.jsp?ID="+ID;
136final String editPage = "edit_sample.jsp?ID="+ID;
137
138String forward = null;
139String redirect = null;
140String message = null;
141DbControl dc = null;
142
143try
144{
145  if (cmd == null || "List".equals(cmd))
146  {
147    // Display the list page without updatinging the current context
148    Base.getAndSetCurrentContext(sc, itemType, null, defaultContext, true);
149    redirect = listPage;
150  }
151  else if ("UpdateContext".equals(cmd))
152  {
153    // Display the list page after updating the current context from the request parameters
154    Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
155    redirect = listPage;
156  }
157  else if ("LoadContext".equals(cmd))
158  {
159    // Display the list page after loading a saved context
160    int contextId = Values.getInt(request.getParameter("context"));
161    Base.loadContext(sc, contextId, defaultContext);
162    redirect = listPage;
163  }
164
165  else if ("ViewItem".equals(cmd))
166  {
167    // Display the view page for a single item
168    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
169    forward = viewPage;
170  }
171  else if ("EditItem".equals(cmd))
172  {
173    // Display the edit page for a single item (should be opened in a popup)
174    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
175    redirect = editPage;
176  }
177  else if ("NewItem".equals(cmd))
178  {
179    // Display the edit page for a new item (should be opened in a popup)
180    if (!sc.hasPermission(Permission.CREATE, itemType))
181    {
182      throw new PermissionDeniedException(Permission.CREATE, itemType.toString());
183    }
184    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
185    cc.setId(0);
186    forward = editPage;
187  }
188  else if ("NewPooledItem".equals(cmd))
189  {
190    // Display the edit page for a new pooled item (should be opened in a popup)
191    if (!sc.hasPermission(Permission.CREATE, itemType))
192    {
193      throw new PermissionDeniedException(Permission.CREATE, itemType.toString());
194    }
195    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
196    cc.setId(0);
197    forward = editPage+"&pooled="+true;
198  }
199  else if ("UpdateItem".equals(cmd))
200  {
201    // Update the properties on an item (will close the popup)
202    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, null, defaultContext);
203    final int maxRecent = Base.getMaxRecent(sc);
204    dc = sc.newDbControl();
205    Sample sample = (Sample)cc.getObject("item");
206    if (sample == null)
207    {
208      sample = Sample.getNew(dc);
209      message = "Sample created";
210      dc.saveItem(sample);
211    }
212    else
213    {
214      dc.reattachItem(sample, false);
215      dc.reattachItem(sample.getCreationEvent(), false);
216      message = "Sample updated";
217    }
218
219    // Create extension context
220    JspContext jspContext = ExtensionsControl.createContext(dc, pageContext, GuiContext.item(Item.SAMPLE), sample);
221    ExtensionsInvoker invoker = EditUtil.useOnSaveExtensions(jspContext);
222    try
223    {
224      sample.setName(Values.getStringOrNull(request.getParameter("name")));
225      sample.setDescription(Values.getStringOrNull(request.getParameter("description")));
226      sample.setExternalId(Values.getStringOrNull(request.getParameter("external_id")));
227      sample.setOriginalQuantity(Values.getFloat(request.getParameter("original_quantity"), null));
228
229      int subtypeId = Values.getInt(request.getParameter("subtype_id"), -1);
230      ItemSubtype subtype = null;
231      if (subtypeId >= 0) // < 0 = denied or unchanged
232      {
233        if (subtypeId > 0) subtype = ItemSubtype.getById(dc, subtypeId);
234        sample.setItemSubtype(subtype);
235        if (subtype != null) cc.setRecent(subtype, maxRecent);
236      }
237     
238      BioMaterialEvent creationEvent = sample.getCreationEvent();
239      if (creationEvent.hasPermission(Permission.WRITE))
240      {
241        Formatter<Date> dateFormatter = FormatterFactory.getDateFormatter(sc);
242        creationEvent.setEventDate(dateFormatter.parseString(Values.getStringOrNull(request.getParameter("event_date"))));
243        int protocolId = Values.getInt(request.getParameter("protocol_id"), -1);
244        if (protocolId >= 0) // < 0 = denied or unchanged
245        {
246          Protocol pt = protocolId == 0 ? null : Protocol.getById(dc, protocolId);
247          creationEvent.setProtocol(pt);
248          if (pt != null) cc.setRecent(pt, subtype, maxRecent);
249        }
250      }
251 
252      int biowellId = Values.getInt(request.getParameter("biowell_id"), -1);
253      if (biowellId >= 0) // < 0 = denied or unchanged
254      {
255        BioWell bw = biowellId == 0 ? null : BioWell.getById(dc, biowellId);
256        if (bw != null && bw.getBioMaterial() != null)
257        {
258          throw new WebException("popup", "Biowell can not be used",
259              "The biowell [{1}] on bioplate {2} is already connected to another biomaterial", 
260              HTML.encodeTags(bw.getRow()+"," + bw.getColumn()), HTML.encodeTags(bw.getPlate().getName()));
261        }
262        sample.setBioWell(bw);
263        if (bw != null) cc.setRecent(bw.getPlate(), subtype, maxRecent);
264      }
265 
266      // Parents tab
267      Item parentType = Item.valueOf(request.getParameter("parentType"));
268      if (parentType == Item.BIOSOURCE)
269      {
270        int bioSourceId = Values.getInt(request.getParameter("biosource_id"), -1);
271        if (bioSourceId >= 0) // < 0 = denied or unchanged
272        {
273          BioSource bs = bioSourceId == 0 ? null : BioSource.getById(dc, bioSourceId);
274          creationEvent.setSource(bs);
275          if (bs != null) cc.setRecent(bs, maxRecent);
276        }
277      }
278      else
279      {
280        if (sample.getParentType() != Item.SAMPLE)
281        {
282          creationEvent.clearSources();
283        }
284        String[] modifiedSamples = Values.getString(request.getParameter("+SAMPLE")).split(",");
285        for (int i = 0; i < modifiedSamples.length; ++i)
286        {
287          int sId = Values.getInt(modifiedSamples[i], -1);
288          if (sId != -1) 
289          {
290            Sample s = Sample.getById(dc, sId);
291            creationEvent.addSource(s).setUsedQuantity(Values.getFloat(request.getParameter("SAMPLE."+sId), null));
292          }
293        }
294        String[] removedSamples = Values.getString(request.getParameter("-SAMPLE")).split(",");
295        for (int i = 0; i < removedSamples.length; ++i)
296        {
297          int sId = Values.getInt(removedSamples[i], -1);
298          if (sId != -1) creationEvent.removeSource(Sample.getById(dc, sId));
299        }
300      }
301 
302      // Annotations tab
303      Base.updateAnnotations(dc, sample, sample, request);
304     
305      // OnSave extensions
306      invoker.render(OnSaveRenderer.ON_SAVE);
307      dc.commit();
308      invoker.render(OnSaveRenderer.ON_COMMIT);
309    }
310    catch (Exception ex)
311    {
312      invoker.render(OnSaveRenderer.onRollback(ex));
313      throw ex;
314    }
315    finally
316    {
317      cc.removeObject("item");
318    }
319  }
320  else if ("DeleteItem".equals(cmd))
321  {
322    // Delete a single item and then return to the view page
323    dc = sc.newDbControl();
324    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
325    RemovableUtil.setRemoved(dc, itemType, Collections.singleton(cc.getId()), true);
326    dc.commit();
327    redirect = viewPage;
328  }
329  else if ("DeleteItems".equals(cmd))
330  {
331    // Delete all selected items on the list page
332    dc = sc.newDbControl();
333    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
334    int numTotal = cc.getSelected().size();
335    int numRemoved = RemovableUtil.setRemoved(dc, itemType, cc.getSelected(), true);
336    dc.commit();
337    if (numTotal != numRemoved)
338    {
339      message = (numRemoved == 0 ? "No" : "Only "+numRemoved+" of "+numTotal) + " items could be deleted, because you have no DELETE permission";
340    }
341    redirect = listPage;
342  }
343  else if ("RestoreItem".equals(cmd))
344  {
345    // Restore a single item and then return to the view page
346    dc = sc.newDbControl();
347    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
348    RemovableUtil.setRemoved(dc, itemType, Collections.singleton(cc.getId()), false);
349    dc.commit();
350    redirect = viewPage;
351  }
352  else if ("RestoreItems".equals(cmd))
353  {
354    // Restore all selected items on the list page
355    dc = sc.newDbControl();
356    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
357    int numTotal = cc.getSelected().size();
358    int numRemoved = RemovableUtil.setRemoved(dc, itemType, cc.getSelected(), false);
359    dc.commit();
360    if (numTotal != numRemoved)
361    {
362      message = (numRemoved == 0 ? "No" : "Only "+numRemoved+" of "+numTotal) + " items could be restored, because you have no WRITE permission";
363    }
364    redirect = listPage;
365  }
366  else if ("ShareItem".equals(cmd))
367  {
368    // Display a popup window for sharing a single item
369    dc = sc.newDbControl();
370    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
371    MultiPermissions permissions = ShareableUtil.getMultiPermissions(dc, itemType, Collections.singleton(cc.getId()));
372    dc.close();
373    cc.setObject("MultiPermissions", permissions);
374    redirect = "../../common/share/share.jsp?ID="+ID+"&item_type="+itemType.name();
375  }
376  else if ("ShareItems".equals(cmd))
377  {
378    // Display a popup window for sharing all selected items on the list page
379    dc = sc.newDbControl();
380    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
381    MultiPermissions permissions = ShareableUtil.getMultiPermissions(dc, itemType, cc.getSelected());
382    dc.close();
383    cc.setObject("MultiPermissions", permissions);
384    redirect = "../../common/share/share.jsp?ID="+ID+"&item_type="+itemType.name();
385  }
386  else if ("SetOwnerOfItem".equals(cmd))
387  {
388    // Change owner of items selected on a list page
389    dc = sc.newDbControl();
390    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
391    OwnedItem item = (OwnedItem)itemType.getById(dc, cc.getId());
392    cc.setObject("OwnedItems", Collections.singleton(item));
393    redirect = "../../common/ownership/ownership.jsp?ID="+ID+"&item_type="+itemType.name();
394  }
395  else if ("SetOwnerOfItems".equals(cmd))
396  {
397    // Change owner of items selected on a list page
398    dc = sc.newDbControl();
399    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
400    Set<OwnedItem> items = new HashSet<OwnedItem>();
401    for (Integer id : cc.getSelected())
402    {
403      if (id != null) items.add((OwnedItem)itemType.getById(dc, id));
404    }
405    dc.close();
406    cc.setObject("OwnedItems", items);
407    redirect = "../../common/ownership/ownership.jsp?ID="+ID+"&item_type="+itemType.name();
408  }
409  else if ("InheritAnnotations".equals(cmd))
410  {
411    // Change owner of items selected on a list page
412    dc = sc.newDbControl();
413    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
414    Set<AnnotatedItem> items = new HashSet<AnnotatedItem>();
415    for (Integer id : cc.getSelected())
416    {
417      if (id != null) items.add((AnnotatedItem)itemType.getById(dc, id));
418    }
419    dc.close();
420    cc.setObject("AnnotatedItems", items);
421    redirect = "../../common/annotations/batch_inherit.jsp?ID="+ID+"&item_type="+itemType.name();
422  }
423  else if ("ExportItems".equals(cmd))
424  {
425    // Run an export plugin in a list context
426    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
427    final ItemQuery<Sample> query = Sample.getQuery();
428    dc = sc.newDbControl();
429    cc.configureQuery(dc, query, true);
430    registerExportUtils(cc);
431    cc.setQuery(query);
432    JspContext jspContext = ExtensionsControl.createContext(dc, pageContext, GuiContext.list(itemType), null);
433    ExtensionsInvoker listInvoker = ListColumnUtil.useExtensions(jspContext);
434    listInvoker.render(new ListColumnExportRenderer(cc));
435    dc.close();
436    redirect = "../../common/export/index.jsp?ID="+ID+"&cmd=SelectPlugin&item_type="+itemType.name()+"&context_type=LIST&title=Export+samples";
437  }
438  else if ("ExportItem".equals(cmd))
439  {
440    // Run an export plugin in single-item context
441    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
442    registerExportUtils(cc);
443    redirect = "../../common/export/index.jsp?ID="+ID+"&cmd=SelectPlugin&item_type="+itemType.name()+"&context_type=ITEM&title=Export+sample";
444  }
445  else if ("ImportItems".equals(cmd))
446  {
447    // Run an import plugin in a list context
448    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
449    final ItemQuery<Sample> query = Sample.getQuery();
450    dc = sc.newDbControl();
451    cc.configureQuery(dc, query, true);
452    dc.close();
453    cc.setQuery(query);
454    redirect = "../../common/import/index.jsp?ID="+ID+"&cmd=SelectPlugin&item_type="+itemType.name()+"&context_type=LIST&title=Import+sample";
455  }
456  else if ("ImportItem".equals(cmd))
457  {
458    // Run an import plugin in single-item context
459    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
460    redirect = "../../common/import/index.jsp?ID="+ID+"&cmd=SelectPlugin&item_type="+itemType.name()+"&context_type=ITEM&title=Import+sample";
461  }
462  else if ("RunListPlugin".equals(cmd))
463  {
464    // Run another plugin in a list context
465    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
466    final ItemQuery<Sample> query = Sample.getQuery();
467    dc = sc.newDbControl();
468    cc.configureQuery(dc, query, true);
469    dc.close();
470    cc.setQuery(query);
471    redirect = "../../common/plugin/index.jsp?ID="+ID+"&cmd=SelectPlugin&item_type="+itemType.name()+"&context_type=LIST&main_type=OTHER&title=Run+plugin";
472  }
473  else if ("RunPlugin".equals(cmd))
474  {
475    // Run another plugin in single-item context
476    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
477    redirect = "../../common/plugin/index.jsp?ID="+ID+"&cmd=SelectPlugin&item_type="+itemType.name()+"&context_type=ITEM&main_type=OTHER&title=Run+plugin";
478  }
479  else if ("CreateBioMaterialList".equals(cmd))
480  {
481    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
482    final ItemQuery<Sample> query = Sample.getQuery();
483    dc = sc.newDbControl();
484    cc.configureQuery(dc, query, true);
485    dc.close();
486    cc.setQuery(query);
487    redirect = "../lists/index.jsp?ID="+ID+"&cmd=NewItem&addBioMaterials=1&formId=samples&fromContext=SAMPLE";
488  }
489  else if ("PlaceOnPlate".equals(cmd))
490  {
491    ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext);
492    final ItemQuery<Sample> query = Sample.getQuery();
493    dc = sc.newDbControl();
494    cc.configureQuery(dc, query, true);
495    dc.close();
496    cc.filterOnSelectedItems(query);
497    sc.getCurrentContext(Item.BIOPLATEEVENT, BioPlateEventType.PLACE_ON_PLATE).setQuery(query);
498    redirect = "../wizards/place_on_plate.jsp?ID="+ID+"&itemType=SAMPLE";
499  }
500  else
501  {
502    throw new WebException("popup", "Invalid command", "The command {1} is not recognised as a valid command.", cmd);
503  }
504}
505finally
506{
507  if (dc != null) dc.close();
508}
509
510if (forward != null)
511{
512  sc.setSessionSetting("alert-message", message);
513  pageContext.forward(forward);
514}
515else if (redirect != null)
516{
517  sc.setSessionSetting("alert-message", message);
518  response.sendRedirect(redirect);
519}
520else if (message == null)
521{
522  response.sendRedirect(root + "common/close_popup.jsp?refresh_opener=1&wait=0");
523}
524else
525{
526  response.sendRedirect(root + "common/close_popup.jsp?refresh_opener=1&message="+HTML.urlEncode(message));
527}
528%>
529
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