1 | <%-- $Id: index.jsp 5053 2009-08-18 09:52:16Z nicklas $ |
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2 | ------------------------------------------------------------------ |
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3 | Copyright (C) 2005 Nicklas Nordborg |
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4 | Copyright (C) 2006 Jari Häkkinen, Nicklas Nordborg, Martin Svensson |
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5 | |
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6 | This file is part of BASE - BioArray Software Environment. |
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7 | Available at http://base.thep.lu.se/ |
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8 | |
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9 | BASE is free software; you can redistribute it and/or |
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10 | modify it under the terms of the GNU General Public License |
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11 | as published by the Free Software Foundation; either version 3 |
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12 | of the License, or (at your option) any later version. |
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13 | |
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14 | BASE is distributed in the hope that it will be useful, |
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15 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
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16 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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17 | GNU General Public License for more details. |
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18 | |
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19 | You should have received a copy of the GNU General Public License |
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20 | along with BASE. If not, see <http://www.gnu.org/licenses/>. |
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21 | ------------------------------------------------------------------ |
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22 | |
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23 | @author Nicklas |
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24 | @version 2.0 |
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25 | --%> |
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26 | <%@ page session="false" |
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27 | import="net.sf.basedb.core.SessionControl" |
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28 | import="net.sf.basedb.core.DbControl" |
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29 | import="net.sf.basedb.core.Item" |
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30 | import="net.sf.basedb.core.Include" |
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31 | import="net.sf.basedb.core.BasicItem" |
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32 | import="net.sf.basedb.core.ChangeHistory" |
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33 | import="net.sf.basedb.core.ItemQuery" |
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34 | import="net.sf.basedb.core.ItemResultIterator" |
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35 | import="net.sf.basedb.core.Permission" |
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36 | import="net.sf.basedb.core.ItemContext" |
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37 | import="net.sf.basedb.core.MultiPermissions" |
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38 | import="net.sf.basedb.core.OwnedItem" |
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39 | import="net.sf.basedb.core.PermissionDeniedException" |
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40 | import="net.sf.basedb.core.ItemAlreadyExistsException" |
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41 | import="net.sf.basedb.core.Sample" |
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42 | import="net.sf.basedb.core.query.Hql" |
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43 | import="net.sf.basedb.core.query.Orders" |
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44 | import="net.sf.basedb.core.query.Restrictions" |
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45 | import="net.sf.basedb.core.query.Expressions" |
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46 | import="net.sf.basedb.util.RemovableUtil" |
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47 | import="net.sf.basedb.util.ShareableUtil" |
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48 | import="net.sf.basedb.util.OwnableUtil" |
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49 | import="net.sf.basedb.util.formatter.NameableFormatter" |
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50 | import="net.sf.basedb.clients.web.Base" |
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51 | import="net.sf.basedb.clients.web.WebException" |
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52 | import="net.sf.basedb.util.Values" |
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53 | import="net.sf.basedb.clients.web.plugins.ItemQueryLoader" |
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54 | import="net.sf.basedb.clients.web.util.HTML" |
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55 | import="java.util.Enumeration" |
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56 | import="java.util.Set" |
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57 | import="java.util.HashSet" |
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58 | import="java.util.List" |
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59 | import="java.util.ArrayList" |
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60 | import="java.util.Collections" |
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61 | %> |
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62 | <%@ taglib prefix="base" uri="/WEB-INF/base.tld" %> |
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63 | <%! |
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64 | private static final ItemContext defaultContext = |
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65 | Base.createDefaultContext("-$hst.time", "time,changeType,user,changeInfo"); |
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66 | private static final Item itemType = Item.CHANGEHISTORY; |
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67 | %> |
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68 | <% |
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69 | final int sourceId = Values.getInt(request.getParameter("source_id")); |
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70 | final Item sourceType = Item.valueOf(request.getParameter("source_type")); |
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71 | |
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72 | final SessionControl sc = Base.getExistingSessionControl(pageContext, true); |
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73 | final String ID = sc.getId(); |
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74 | final String cmd = request.getParameter("cmd"); |
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75 | final String root = request.getContextPath()+"/"; |
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76 | final String mode = request.getParameter("mode"); |
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77 | final String callback = request.getParameter("callback"); |
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78 | final String itemId = request.getParameter("item_id"); |
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79 | final String listPage = "list_history.jsp?ID="+ID |
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80 | +"&source_id="+sourceId |
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81 | +"&source_type="+sourceType.name() |
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82 | +(mode == null ? "" : "&mode="+mode) |
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83 | +(callback == null ? "" : "&callback="+callback) |
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84 | +(itemId == null ? "" : "&item_id="+itemId); |
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85 | final String viewPage = "view_history.jsp?ID="+ID; |
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86 | |
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87 | String forward = null; |
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88 | String redirect = null; |
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89 | String message = null; |
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90 | DbControl dc = null; |
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91 | |
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92 | try |
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93 | { |
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94 | if (cmd == null || "List".equals(cmd)) |
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95 | { |
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96 | // Display the list page without updatinging the current context |
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97 | Base.getAndSetCurrentContext(sc, itemType, null, defaultContext, true); |
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98 | redirect = listPage; |
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99 | } |
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100 | else if ("UpdateContext".equals(cmd)) |
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101 | { |
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102 | // Display the list page after updating the current context from the request parameters |
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103 | Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext); |
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104 | redirect = listPage; |
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105 | } |
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106 | else if ("LoadContext".equals(cmd)) |
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107 | { |
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108 | // Display the list page after loading a saved context |
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109 | int contextId = Values.getInt(request.getParameter("context")); |
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110 | Base.loadContext(sc, contextId, defaultContext); |
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111 | redirect = listPage; |
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112 | } |
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113 | |
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114 | else if ("ViewItem".equals(cmd)) |
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115 | { |
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116 | // Display the view page for a single item |
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117 | ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext); |
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118 | forward = viewPage; |
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119 | } |
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120 | else if ("ExportItems".equals(cmd)) |
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121 | { |
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122 | // Run an export plugin in a list context |
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123 | ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext); |
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124 | dc = sc.newDbControl(); |
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125 | BasicItem source = sourceType.getById(dc, sourceId); |
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126 | final ItemQuery<ChangeHistory> query = ChangeHistory.getHistoryOf(source); |
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127 | cc.configureQuery(query, true); |
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128 | cc.setQuery(query); |
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129 | redirect = "../../common/export/index.jsp?ID="+ID+"&cmd=SelectPlugin&item_type="+itemType.name()+"&context_type=LIST&title=Export+biosources"; |
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130 | } |
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131 | else if ("ExportItem".equals(cmd)) |
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132 | { |
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133 | // Run an export plugin in single-item context |
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134 | ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, pageContext, defaultContext); |
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135 | redirect = "../../common/export/index.jsp?ID="+ID+"&cmd=SelectPlugin&item_type="+itemType.name()+"&context_type=ITEM&title=Export+biosource"; |
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136 | } |
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137 | else |
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138 | { |
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139 | throw new WebException("popup", "Invalid command", "The command {1} is not recognised as a valid command.", cmd); |
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140 | } |
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141 | } |
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142 | finally |
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143 | { |
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144 | if (dc != null) dc.close(); |
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145 | } |
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146 | |
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147 | if (forward != null) |
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148 | { |
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149 | pageContext.forward(forward); |
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150 | } |
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151 | else if (redirect != null) |
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152 | { |
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153 | response.sendRedirect(redirect); |
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154 | } |
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155 | else if (message == null) |
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156 | { |
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157 | response.sendRedirect(root + "common/close_popup.jsp?refresh_opener=1&wait=0"); |
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158 | } |
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159 | else |
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160 | { |
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161 | response.sendRedirect(root + "common/close_popup.jsp?refresh_opener=1&message="+HTML.urlEncode(message)); |
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162 | } |
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163 | %> |
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164 | |
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