source: trunk/www/common/import/select_file.jsp @ 3852

<%-- $Id: select_file.jsp 3852 2007-10-17 07:58:57Z nicklas $
  ------------------------------------------------------------------
  Copyright (C) 2005 Nicklas Nordborg
  Copyright (C) 2006 Jari Hakkinen, Nicklas Nordborg, Martin Svensson

  This file is part of BASE - BioArray Software Environment.
  Available at http://base.thep.lu.se/

  BASE is free software; you can redistribute it and/or
  modify it under the terms of the GNU General Public License
  as published by the Free Software Foundation; either version 2
  of the License, or (at your option) any later version.

  BASE is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  GNU General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with this program; if not, write to the Free Software
  Foundation, Inc., 59 Temple Place - Suite 330,
  Boston, MA  02111-1307, USA.
  ------------------------------------------------------------------

  @author Nicklas
  @version 2.0
--%>
<%@ page session="false"
  import="net.sf.basedb.core.SessionControl"
  import="net.sf.basedb.core.DbControl"
  import="net.sf.basedb.core.Item"
  import="net.sf.basedb.core.ItemContext"
  import="net.sf.basedb.core.File"
  import="net.sf.basedb.core.PluginConfiguration"
  import="net.sf.basedb.core.PluginType"
  import="net.sf.basedb.core.ItemQuery"
  import="net.sf.basedb.core.ItemResultList"
  import="net.sf.basedb.core.Include"
  import="net.sf.basedb.core.Job"
  import="net.sf.basedb.core.Location"
  import="net.sf.basedb.core.FileStoreEnabled"
  import="net.sf.basedb.core.FileSetMember"
  import="net.sf.basedb.core.DataFileType"
  import="net.sf.basedb.core.query.Hql"
  import="net.sf.basedb.core.query.Expressions"
  import="net.sf.basedb.core.query.Restrictions"
  import="net.sf.basedb.core.query.Orders"
  import="net.sf.basedb.core.plugin.GuiContext"
  import="net.sf.basedb.core.plugin.Plugin"
  import="net.sf.basedb.core.plugin.AutoDetectingImporter"
  import="net.sf.basedb.clients.web.Base"
  import="net.sf.basedb.clients.web.util.HTML"
  import="net.sf.basedb.util.Values"
  import="java.util.List"
%>
<%@ taglib prefix="base" uri="/WEB-INF/base.tld" %>
<%@ taglib prefix="t" uri="/WEB-INF/tab.tld" %>
<%
final SessionControl sc = Base.getExistingSessionControl(pageContext, true);
final String ID = sc.getId();
final Item itemType = Item.valueOf(request.getParameter("item_type"));
final String subContext = Values.getString(request.getParameter("subcontext"), "");
final ItemContext currentContext = sc.getCurrentContext(itemType, subContext);
final GuiContext.Type contextType = GuiContext.Type.valueOf(request.getParameter("context_type"));
final GuiContext context = new GuiContext(itemType, contextType);
final String title = request.getParameter("title");
final DbControl dc = sc.newDbControl();

try
{
  // Try to get data files attached to FileStoreEnabled items
  File currentFile = null;
  List<FileSetMember> dataFiles = null;
  if (FileStoreEnabled.class.isAssignableFrom(itemType.getItemClass()))
  {
    FileStoreEnabled fileStoreItem = null;
    try
    {
      fileStoreItem = (FileStoreEnabled)itemType.getById(dc, currentContext.getId());
    }
    catch (Throwable t)
    {}
    if (fileStoreItem != null && fileStoreItem.hasFileSet())
    {
      dataFiles = fileStoreItem.getFileSet().getMembers().list(dc);
      if (dataFiles.size() > 0)
      {
        // The first file will be selected by default
        try
        {
          currentFile = dataFiles.get(0).getFile();
        }
        catch (Throwable t)
        {}
      }
    }
  }
  List<File> recentFiles = (List<File>)currentContext.getRecent(dc, Item.FILE);
  %>
  <%@page import="net.sf.basedb.core.RawBioAssay"%>
<%@page import="net.sf.basedb.core.FileStoreUtil"%>
<%@page import="net.sf.basedb.core.FileType"%>
<%@page import="net.sf.basedb.core.FileStoreEnabled"%>
<base:page type="popup" title="<%=title%>">
  <base:head>
    <script language="JavaScript">
    function doImport()
    {
      var frm = document.forms['import'];
      if (Main.trimString(frm.path.value) == '')
      {
        alert("You must select a file to import from");
        frm.path.focus();
      }
      else
      {
        frm.submit();
      }
    }
    function browseOnClick()
    {
      var frm = document.forms['import'];
      var url = '../../filemanager/index.jsp?ID=<%=ID%>&cmd=SelectOne&title=Select+file+to+import&callback=setFileCallback';
      url += '&filter:INT:location=<%=Location.PRIMARY.getValue()%>';
      Main.openPopup(url, 'SelectFile', 1000, 700);
    }
    function setFileCallback(fileId, path)
    {
      var frm = document.forms['import'];
      frm.file_id.value = fileId;
      frm.path.value = path;
    }
    function recentFileOnChange()
    {
      var frm = document.forms['import'];
      var selected = frm.recentFile[frm.recentFile.selectedIndex];
      setFileCallback(selected.value, selected.text);
      frm.recentFile.selectedIndex = 0;
    }
    function dataFileOnChange()
    {
      var frm = document.forms['import'];
      var selected = frm.dataFile[frm.dataFile.selectedIndex];
      setFileCallback(selected.value, selected.text.replace(/\[.*\]\s/, ''));
      frm.dataFile.selectedIndex = 0;
    }
    </script>
  </base:head>
  <base:body>
    <form name="import" action="index.jsp" method="get" onsubmit="return false;">
    <input type="hidden" name="ID" value="<%=ID%>">
    <input type="hidden" name="cmd" value="AutoDetect">
    <input type="hidden" name="item_type" value="<%=itemType.name()%>">
    <input type="hidden" name="subcontext" value="<%=subContext%>">
    <input type="hidden" name="context_type" value="<%=contextType.name()%>">
    <input type="hidden" name="title" value="<%=title%>">
    <input type="hidden" name="job_name" value="<%=HTML.encodeTags(request.getParameter("job_name"))%>">
    <input type="hidden" name="job_description" value="<%=HTML.encodeTags(request.getParameter("job_description"))%>">
    <input type="hidden" name="plugindefinition_id" value="<%=request.getParameter("plugindefinition_id")%>">
    <input type="hidden" name="file_id" value="">
    
    <h3 class="docked"><%=title%> <base:help helpid="import.autodetect.selectfile" /></h3>
    <div class="boxed">
      <div class="helpmessage">
      Select a file to import from.
      </div>
      <table class="form" width="100%">
      <tr valign="top">
        <td class="prompt">File</td>
        <td>
          <table border="0" cellspacing="0" cellpadding="0">
          <tr>
          <td><input type="text" class="text required" name="path" size="60" 
            value="<%=currentFile != null ? HTML.encodeTags(currentFile.getPath().toString()) : "" %>">&nbsp;</td>
          <td><base:button 
              title="Browse&hellip;"
              onclick="browseOnClick()"
              />
          </td>
          </tr>
          </table>
        </td>
      </tr>
      <%
      if (dataFiles != null && dataFiles.size() > 0)
      {
        %>
        <tr>
          <td class="prompt">Data files</td>
          <td>
            <select name="dataFile" onchange="dataFileOnChange()">
            <option value="">
            <%
            for (FileSetMember member : dataFiles)
            {
              File file = null;
              DataFileType dft = null;
              try
              {
                dft = member.getDataFileType();
              }
              catch (Throwable t)
              {}
              try
              {
                file = member.getFile();
              }
              catch (Throwable t)
              {}
              if (file != null)
              {
                String path = HTML.encodeTags(file.getPath().toString());
                String type = dft != null ? "[" + HTML.encodeTags(dft.getName()) + "] " : "";
                %>
                <option value="<%=file.getId()%>"><%=type%><%=path%>
                <%
              }
            }
            %>
            </select>
          </td>
        </tr>
        <%
      }
      %>
      <%
      if (recentFiles.size() > 0)
      {
        %>
        <tr>
          <td class="prompt">Recently used</td>
          <td>
            <select name="recentFile" onchange="recentFileOnChange()">
            <option value="">
            <%
            for (File recent : recentFiles)
            {
              String path = HTML.encodeTags(recent.getPath().toString());
              %>
              <option value="<%=recent.getId()%>"><%=path%>
              <%
            }
            %>
            </select>
          </td>
        </tr>
        <%
      }
      %>
      </table>
      <div align=right>&nbsp;<i><base:icon image="required.gif" /> = required information</i></div>
    </div>
    </form>
  
    <table align="center">
    <tr>
      <td width="50%"><base:button onclick="doImport();" title="Next" /></td>
      <td width="50%"><base:button onclick="window.close();" title="Cancel" /></td>
    </tr>
    </table>
  </base:body>
  </base:page>
  <%
}
finally
{
  if (dc != null) dc.close();
}
%>