1 | <%-- $Id: manage_plates.jsp 5917 2011-12-19 11:28:45Z nicklas $ |
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2 | ------------------------------------------------------------------ |
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3 | Copyright (C) 2006 Jari Häkkinen, Nicklas Nordborg |
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4 | |
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5 | This file is part of BASE - BioArray Software Environment. |
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6 | Available at http://base.thep.lu.se/ |
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7 | |
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8 | BASE is free software; you can redistribute it and/or |
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9 | modify it under the terms of the GNU General Public License |
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10 | as published by the Free Software Foundation; either version 3 |
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11 | of the License, or (at your option) any later version. |
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12 | |
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13 | BASE is distributed in the hope that it will be useful, |
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14 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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16 | GNU General Public License for more details. |
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17 | |
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18 | You should have received a copy of the GNU General Public License |
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19 | along with BASE. If not, see <http://www.gnu.org/licenses/>. |
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20 | ------------------------------------------------------------------ |
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21 | |
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22 | |
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23 | @author Nicklas |
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24 | @version 2.0 |
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25 | --%> |
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26 | <%@ page pageEncoding="UTF-8" session="false" |
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27 | import="net.sf.basedb.core.SessionControl" |
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28 | import="net.sf.basedb.core.DbControl" |
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29 | import="net.sf.basedb.core.Item" |
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30 | import="net.sf.basedb.core.ItemContext" |
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31 | import="net.sf.basedb.core.SystemItems" |
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32 | import="net.sf.basedb.core.Permission" |
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33 | import="net.sf.basedb.core.Include" |
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34 | import="net.sf.basedb.core.ArrayDesign" |
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35 | import="net.sf.basedb.core.ArrayDesignPlate" |
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36 | import="net.sf.basedb.core.Plate" |
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37 | import="net.sf.basedb.core.ItemQuery" |
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38 | import="net.sf.basedb.core.ItemResultList" |
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39 | import="net.sf.basedb.core.PermissionDeniedException" |
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40 | import="net.sf.basedb.core.BaseException" |
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41 | import="net.sf.basedb.core.query.Orders" |
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42 | import="net.sf.basedb.core.query.Hql" |
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43 | import="net.sf.basedb.clients.web.Base" |
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44 | import="net.sf.basedb.clients.web.util.HTML" |
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45 | import="net.sf.basedb.util.Values" |
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46 | import="java.util.List" |
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47 | import="java.util.Set" |
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48 | import="java.util.HashSet" |
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49 | import="java.util.Date" |
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50 | %> |
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51 | <%@ taglib prefix="base" uri="/WEB-INF/base.tld" %> |
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52 | <%@ taglib prefix="t" uri="/WEB-INF/tab.tld" %> |
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53 | <% |
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54 | final Item itemType = Item.ARRAYDESIGN; |
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55 | final SessionControl sc = Base.getExistingSessionControl(pageContext, true); |
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56 | final ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, null, null); |
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57 | final int itemId = cc.getId(); |
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58 | final String ID = sc.getId(); |
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59 | final float scale = Base.getScale(sc); |
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60 | final DbControl dc = sc.newDbControl(); |
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61 | try |
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62 | { |
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63 | ArrayDesign design = ArrayDesign.getById(dc, itemId); |
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64 | cc.setObject("item", design); |
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65 | String title = "Attach plate -- " + HTML.encodeTags(design.getName()); |
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66 | if (!design.hasPermission(Permission.WRITE)) |
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67 | { |
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68 | throw new PermissionDeniedException(Permission.WRITE, itemType.toString()); |
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69 | } |
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70 | final String clazz = "class=\"text\""; |
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71 | final String requiredClazz = "class=\"text required\""; |
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72 | %> |
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73 | |
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74 | <base:page type="popup" title="<%=title%>"> |
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75 | <base:head scripts="tabcontrol.js,linkitems.js" styles="tabcontrol.css"> |
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76 | <script language="JavaScript"> |
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77 | // Validate the "Plates" tab |
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78 | function validatePlates() |
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79 | { |
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80 | return true; |
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81 | } |
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82 | |
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83 | // Submit the form |
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84 | function saveSettings() |
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85 | { |
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86 | var frm = document.forms['design']; |
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87 | if (TabControl.validateActiveTab('settings')) |
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88 | { |
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89 | var plates = frm.plates; |
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90 | for (var i = 0; i < plates.length; ++i) // > |
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91 | { |
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92 | plates[i].selected = true; |
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93 | } |
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94 | frm.submit(); |
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95 | } |
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96 | } |
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97 | |
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98 | function addPlatesOnClick() |
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99 | { |
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100 | var ids = Link.getListIds(document.forms['design'].plates, ''); |
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101 | var excludes = ids.join(','); |
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102 | var url = '../plates/index.jsp?ID=<%=ID%>&cmd=UpdateContext&mode=selectmultiple&callback=addPlateCallback'; |
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103 | url += '&excludes='+excludes; |
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104 | Main.openPopup(url, 'AddPlates', 1000, 700); |
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105 | } |
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106 | |
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107 | function addPlateCallback(plateId, name) |
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108 | { |
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109 | var item = Link.getItem('', plateId); |
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110 | if (!item) item = new Item('', plateId, name); |
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111 | Link.addItem(document.forms['design'].plates, item); |
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112 | } |
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113 | |
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114 | function removePlatesOnClick() |
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115 | { |
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116 | Link.removeSelected(document.forms['design'].plates); |
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117 | } |
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118 | |
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119 | function init() |
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120 | { |
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121 | var frm = document.forms['design']; |
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122 | var plates = frm.plates; |
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123 | <% |
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124 | ItemQuery<ArrayDesignPlate> platesQuery = design.getArrayDesignPlates(); |
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125 | platesQuery.include(Include.MINE, Include.SHARED, Include.OTHERS, Include.IN_PROJECT); |
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126 | platesQuery.order(Orders.asc(Hql.property("position"))); |
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127 | ItemResultList<ArrayDesignPlate> plates = platesQuery.list(dc); |
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128 | for (ArrayDesignPlate adPlate : plates) |
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129 | { |
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130 | Plate plate = adPlate.getPlate(); |
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131 | %> |
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132 | Link.addNewItem(plates, new Item('', <%=plate.getId()%>, '<%=HTML.javaScriptEncode(plate.getName())%>')); |
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133 | <% |
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134 | } |
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135 | %> |
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136 | } |
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137 | </script> |
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138 | </base:head> |
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139 | <base:body onload="init()"> |
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140 | <h1><%=title%> <base:help helpid="arraydesign.edit.plates" /></h1> |
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141 | <form action="index.jsp?ID=<%=ID%>" method="post" name="design" onsubmit="return false;"> |
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142 | <input type="hidden" name="cmd" value="UpdatePlates"> |
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143 | |
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144 | <div class="content bottomborder"> |
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145 | <table class="fullform"> |
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146 | <tr> |
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147 | <th>Array design</th> |
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148 | <td><%=HTML.encodeTags(design.getName())%></td> |
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149 | </tr> |
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150 | <tr class="dynamic"> |
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151 | <th>Plates</th> |
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152 | <td> |
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153 | <div class="selectionlist"> |
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154 | <table> |
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155 | <tr style="vertical-align: top;"> |
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156 | <td> |
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157 | <base:buttongroup vertical="true"> |
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158 | <base:button |
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159 | onclick="Forms.moveListOptions(document.forms['design'].plates, false)" |
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160 | image="move_up.png" |
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161 | tooltip="Move up" |
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162 | subclass="square" |
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163 | /> |
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164 | <base:button |
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165 | onclick="Forms.moveListOptions(document.forms['design'].plates, true)" |
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166 | image="move_down.png" |
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167 | tooltip="Move down" |
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168 | subclass="square" |
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169 | /> |
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170 | </base:buttongroup> |
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171 | </td> |
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172 | <td> |
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173 | <select name="plates" size="15" multiple> |
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174 | </select> |
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175 | </td> |
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176 | <td> |
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177 | <base:buttongroup vertical="true"> |
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178 | <base:button |
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179 | subclass="leftaligned" |
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180 | style="width: 12em;" |
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181 | onclick="addPlatesOnClick()" |
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182 | title="Add plates..." |
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183 | tooltip="Add plates to be used" |
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184 | /> |
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185 | <base:button |
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186 | subclass="leftaligned" |
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187 | style="width: 12em;" |
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188 | onclick="removePlatesOnClick()" |
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189 | title="Remove" |
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190 | tooltip="Remove the selected plates" |
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191 | /> |
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192 | </base:buttongroup> |
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193 | </td> |
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194 | </tr> |
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195 | </table> |
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196 | </div> |
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197 | </td> |
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198 | </tr> |
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199 | </table> |
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200 | </div> |
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201 | </form> |
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202 | |
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203 | <base:buttongroup subclass="dialogbuttons"> |
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204 | <base:button onclick="saveSettings()" title="Save" /> |
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205 | <base:button onclick="window.close()" title="Cancel" /> |
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206 | </base:buttongroup> |
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207 | </base:body> |
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208 | </base:page> |
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209 | <% |
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210 | } |
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211 | finally |
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212 | { |
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213 | if (dc != null) dc.close(); |
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214 | } |
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215 | %> |
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