source: trunk/www/lims/arrayslides/edit_slide.jsp @ 6217

<%-- $Id: edit_slide.jsp 6217 2012-12-14 13:05:00Z nicklas $
  ------------------------------------------------------------------
  Copyright (C) 2006 Jari Häkkinen, Nicklas Nordborg, Martin Svensson

  This file is part of BASE - BioArray Software Environment.
  Available at http://base.thep.lu.se/

  BASE is free software; you can redistribute it and/or
  modify it under the terms of the GNU General Public License
  as published by the Free Software Foundation; either version 3
  of the License, or (at your option) any later version.

  BASE is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  GNU General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with BASE. If not, see <http://www.gnu.org/licenses/>.
  ------------------------------------------------------------------


  @author Nicklas
  @version 2.0
--%>
<%@ page pageEncoding="UTF-8" session="false"
  import="net.sf.basedb.core.SessionControl"
  import="net.sf.basedb.core.DbControl"
  import="net.sf.basedb.core.Item"
  import="net.sf.basedb.core.ItemContext"
  import="net.sf.basedb.core.SystemItems"
  import="net.sf.basedb.core.Permission"
  import="net.sf.basedb.core.Include"
  import="net.sf.basedb.core.ArraySlide"
  import="net.sf.basedb.core.ArrayBatch"
  import="net.sf.basedb.core.ItemQuery"
  import="net.sf.basedb.core.ItemResultList"
  import="net.sf.basedb.core.PermissionDeniedException"
  import="net.sf.basedb.core.BaseException"
  import="net.sf.basedb.core.query.Orders"
  import="net.sf.basedb.core.query.Hql"
  import="net.sf.basedb.clients.web.Base"
  import="net.sf.basedb.clients.web.util.HTML"
  import="net.sf.basedb.util.Values"
  import="net.sf.basedb.core.plugin.GuiContext"
  import="net.sf.basedb.clients.web.extensions.ExtensionsControl"
  import="net.sf.basedb.clients.web.extensions.JspContext"
  import="net.sf.basedb.clients.web.extensions.edit.EditUtil"
  import="net.sf.basedb.util.extensions.ExtensionsInvoker"
  import="java.util.List"
  import="java.util.Set"
  import="java.util.HashSet"
  import="java.util.Date"
%>
<%@ taglib prefix="base" uri="/WEB-INF/base.tld" %>
<%@ taglib prefix="t" uri="/WEB-INF/tab.tld" %>
<%@ taglib prefix="ext" uri="/WEB-INF/extensions.tld" %>
<%
final Item itemType = Item.ARRAYSLIDE;
final SessionControl sc = Base.getExistingSessionControl(pageContext, true);
final ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, null, null);
final int itemId = cc.getId();
final String ID = sc.getId();
final float scale = Base.getScale(sc);
final DbControl dc = sc.newDbControl();
try
{
  String title = null;
  ArraySlide slide = null;
  
  boolean readCurrentArrayBatch = true;
  ArrayBatch currentArrayBatch = null;
  int maxIndex = 0;
  
  // Load recently used items
  List<ArrayBatch> recentArrayBatches = (List<ArrayBatch>)cc.getRecent(dc, Item.ARRAYBATCH);

  if (itemId == 0)
  {
    title = "Create array slide";
    cc.removeObject("item");
    int arrayBatchId = Values.getInt(request.getParameter("arraybatch_id"));
    if (arrayBatchId != 0)
    {
      currentArrayBatch = ArrayBatch.getById(dc, arrayBatchId);
    }
    else if (cc.getPropertyFilter("arrayBatch.name") != null)
    {
      currentArrayBatch = Base.getFirstMatching(dc, ArrayBatch.getQuery(), "name", cc.getPropertyFilter("arrayBatch.name"));
    }
    if (currentArrayBatch != null)
    {
      maxIndex = (int)currentArrayBatch.getArraySlides().count(dc);
    }
  }
  else
  {
    slide = ArraySlide.getById(dc, itemId);
    cc.setObject("item", slide);
    title = "Edit array slide -- " + HTML.encodeTags(slide.getName());
    try
    {
      currentArrayBatch = slide.getArrayBatch();
    }
    catch (PermissionDeniedException ex)
    {
      readCurrentArrayBatch = false;
    }
  }
  if (slide != null && !slide.hasPermission(Permission.WRITE))
  {
    throw new PermissionDeniedException(Permission.WRITE, itemType.toString());
  }
  
  
  JspContext jspContext = ExtensionsControl.createContext(dc, pageContext, GuiContext.item(itemType), slide);
  ExtensionsInvoker invoker = EditUtil.useEditExtensions(jspContext);
  %>
  <base:page type="popup" title="<%=title%>">
  <base:head scripts="tabcontrol.js,annotations.js" styles="tabcontrol.css">
    <ext:scripts context="<%=jspContext%>" />
    <ext:stylesheets context="<%=jspContext%>" />
    <script>
    // Validate the "ArraySlide" tab
    function validateArraySlide()
    {
      var frm = document.forms['slide'];
      if (Main.trimString(frm.name.value) == '')
      {
        Forms.showNotification(frm.name, 'You must enter a name');
        return false;
      }
      if (frm.arraybatch_id && !frm.arraybatch_id.value)
      {
        Forms.showNotification('arraybatch_id.select', 'You must select an array batch');
        return false;
      }
      return true;
    }

    // Submit the form
    function saveSettings()
    {
      var frm = document.forms['slide'];
      if (TabControl.validateActiveTab('settings'))
      {
        if (annotationsLoaded) 
        {
          Annotations.addModifiedAnnotationsToForm(frames.annotations, frm);
        }
        if (inheritedAnnotationsLoaded)
        {
          Annotations.addInheritedAnnotationsToForm(frames.inheritedAnnotations, frm);
        }
        frm.submit();
      }
    }
    
    var annotationsLoaded = false;
    var inheritedAnnotationsLoaded = false;
    var parentsChanged = false;
    function switchTab(tabControlId, tabId)
    {
      if (TabControl.setActiveTab(tabControlId, tabId))
      {
        if (tabId == 'annotations' && !annotationsLoaded)
        {
          Annotations.loadAnnotateFrame(frames.annotations, '<%=ID%>', '<%=itemType.name()%>', <%=slide == null ? 0 : slide.getId()%>);
          annotationsLoaded = true;
        }
        else if (tabId == 'inheritedAnnotations' && 
          (parentsChanged || !inheritedAnnotationsLoaded))
        {
          Annotations.loadInheritFrame(frames.inheritedAnnotations, '<%=ID%>', '<%=itemType.name()%>', <%=itemId%>, getParents());
          inheritedAnnotationsLoaded = true;
          parentsChanged = false;
        }
      }
    }
    
    function getParents()
    {
      var frm = document.forms['slide'];
      var parents = new Array();
      if (frm.arraybatch_id)
      {
        var batchId = Math.abs(parseInt(frm.arraybatch_id[frm.arraybatch_id.selectedIndex].value));
        if (batchId > 0) parents[parents.length] = 'ARRAYBATCH:'+batchId;
      }
      return parents;
    }
    
    function arrayBatchOnChange()
    {
      parentsChanged = true;
    }   
    function selectArrayBatchOnClick()
    {
      var frm = document.forms['slide'];
      var url = '../../lims/arraybatches/index.jsp?ID=<%=ID%>&cmd=UpdateContext&mode=selectone&callback=setArrayBatchCallback';
      if (frm.arraybatch_id.length > 0) url += '&item_id='+frm.arraybatch_id[0].value;
      Main.openPopup(url, 'SelectArrayBatch', 1050, 700);
    }
    function setArrayBatchCallback(id, name)
    {
      var frm = document.forms['slide'];
      var list = frm.arraybatch_id;
      if (list.length < 1 || list[0].value == '0') // >
      {
        Forms.addListOption(list, 0, new Option());
      }
      list[0].value = id;
      list[0].text = name;
      list.selectedIndex = 0;
      parentsChanged = true;
    }

    function init()
    {
      var frm = document.forms['slide'];
      <%
      if (slide == null)
      {
        %>
        frm.name.focus();
        frm.name.select();
        <%
      }
      %>
    }
    </script>
  </base:head>
  <base:body onload="init()">
    <h1><%=title%> <base:help tabcontrol="settings" /></h1>
    <form action="index.jsp?ID=<%=ID%>" method="post" name="slide">
    <input type="hidden" name="cmd" value="UpdateItem">

    <t:tabcontrol id="settings"
      subclass="content dialogtabcontrol"
      position="bottom"  remember="<%=slide != null%>" switch="switchTab"
      extensions="<%=invoker%>">
    <t:tab id="info" title="Array slide" validate="validateArraySlide()" helpid="arrayslide.edit">
      <table class="fullform input100">
      <tr>
        <th>Name</th>
        <td><input class="text required" type="text" name="name" 
          value="<%=HTML.encodeTags(slide == null ? Values.getString(cc.getPropertyValue("name"), "New array slide") : slide.getName())%>" 
          maxlength="<%=ArraySlide.MAX_NAME_LENGTH%>"></td>
        <td></td>
      </tr>
      <tr>
        <th>Barcode</th>
        <td><input class="text" type="text" name="barcode" 
          value="<%=HTML.encodeTags(slide == null ? Values.getString(cc.getPropertyValue("barcode"), "") : slide.getBarcode())%>" 
          maxlength="<%=ArraySlide.MAX_BARCODE_LENGTH%>"></td>
        <td></td>
      </tr>
      <tr>
        <th><label for="destroyed">Destroyed</label></th>
        <td><input type="checkbox" name="destroyed" id="destroyed" value="1"
          <%=(slide != null && slide.isDestroyed()) || (slide == null && Values.getBoolean(cc.getPropertyValue("destroyed"))) ? "checked" : ""%>>
        </td>
        <td></td>
      </tr>
      <tr>
        <th>Array batch</th>
        <td>
          <%
          if (slide != null)
          {
            %>
            <%=Base.getEncodedName(currentArrayBatch, !readCurrentArrayBatch)%>
            <%
          }
          else
          {
            %>
            <base:select 
              id="arraybatch_id"
              clazz="selectionlist required"
              required="true"
              current="<%=currentArrayBatch%>"
              denied="<%=!readCurrentArrayBatch%>"
              recent="<%=recentArrayBatches%>"
              newitem="true"
              onselect="selectArrayBatchOnClick()"
              onchange="arrayBatchOnChange()()"
            />
            <%
          }
          %>
        </td>
        <td></td>
      </tr>
      <tr>
        <th>Index</th>
        <td><input class="text" type="text" name="batch_index" value="<%=slide == null ? Values.getInt(cc.getPropertyValue("batchIndex"), maxIndex + 1) : slide.getBatchIndex()%>" 
          maxlength="10" style="width: 15em;"
          onkeypress="return Numbers.integerOnly(event)"></td>
        <td></td>
      </tr>
      <tr class="dynamic">
        <th>Description</th>
        <td>
          <textarea class="text" rows="6" name="description" id="description"
            ><%=HTML.encodeTags(slide == null ? cc.getPropertyValue("description") : slide.getDescription())%></textarea>
        </td>
        <td style="width: 20px;">
          <base:zoom textarea="description" title="Description" />
        </td>
      </tr>
      </table>
    </t:tab>
    
    <t:tab id="annotations" title="Annotations &amp; parameters" helpid="annotations.edit"><iframe 
      name="annotations" id="idAnnotations" src="../../common/annotations/wait.jsp" 
      class="absolutefull" style="width: 100%; height: 100%;"></iframe></t:tab>
    
    <t:tab id="inheritedAnnotations" title="Inherited annotations" 
      helpid="annotations.edit.inherited"><iframe 
        name="inheritedAnnotations" id="idInheritedAnnotations" src="../../common/annotations/wait.jsp" 
        class="absolutefull" style="width: 100%; height: 100%;"></iframe></t:tab>
    </t:tabcontrol>
    </form>

    <div class="legend">
      <base:icon image="required.png" />= required information
    </div>

    <base:buttongroup subclass="dialogbuttons">
      <base:button onclick="saveSettings()" title="Save" />
      <base:button onclick="window.close()" title="Cancel" />
    </base:buttongroup>
  </base:body>
  </base:page>
  <%
}
finally
{
  if (dc != null) dc.close();
}
%>