source: trunk/www/views/formulas/view_formula.jsp @ 2918

<%-- $Id: view_formula.jsp 2918 2006-11-15 11:21:13Z nicklas $
  ------------------------------------------------------------------
  Copyright (C) Authors contributing to this file.

  This file is part of BASE - BioArray Software Environment.
  Available at http://base.thep.lu.se/

  BASE is free software; you can redistribute it and/or
  modify it under the terms of the GNU General Public License
  as published by the Free Software Foundation; either version 2
  of the License, or (at your option) any later version.

  BASE is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  GNU General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with this program; if not, write to the Free Software
  Foundation, Inc., 59 Temple Place - Suite 330,
  Boston, MA  02111-1307, USA.
  ------------------------------------------------------------------

  @author Nicklas
  @version 2.0
--%>
<%@ page
  import="net.sf.basedb.core.SessionControl"
  import="net.sf.basedb.core.DbControl"
  import="net.sf.basedb.core.SystemItems"
  import="net.sf.basedb.core.Item"
  import="net.sf.basedb.core.ItemContext"
  import="net.sf.basedb.core.Permission"
  import="net.sf.basedb.core.Formula"
  import="net.sf.basedb.core.Coloring"
  import="net.sf.basedb.core.User"
  import="net.sf.basedb.core.RawDataType"
  import="net.sf.basedb.core.PermissionDeniedException"
  import="net.sf.basedb.core.PluginDefinition"
  import="net.sf.basedb.core.plugin.GuiContext"
  import="net.sf.basedb.core.plugin.Plugin"
  import="net.sf.basedb.util.Values"
  import="net.sf.basedb.clients.web.Base"
  import="net.sf.basedb.clients.web.PermissionUtil"
  import="net.sf.basedb.clients.web.util.HTML"
  import="java.util.List"
  import="java.util.Map"
%>
<%@ taglib prefix="base" uri="/WEB-INF/base.tld" %>
<%@ taglib prefix="tbl" uri="/WEB-INF/table.tld" %>
<%@ taglib prefix="t" uri="/WEB-INF/tab.tld" %>
<%@ taglib prefix="p" uri="/WEB-INF/path.tld" %>
<%!
  private static final Item itemType = Item.FORMULA;
  private static final GuiContext guiContext = new GuiContext(itemType, GuiContext.Type.ITEM);
%>
<%
final SessionControl sc = Base.getExistingSessionControl(pageContext, true);
final String ID = sc.getId();
final ItemContext cc = Base.getAndSetCurrentContext(sc, itemType, null, null);
final int itemId = cc.getId();
final float scale = Base.getScale(sc);
final DbControl dc = sc.newDbControl();
try
{
  Map<Plugin.MainType, Integer> pluginCount = PluginDefinition.countPlugins(dc, guiContext);

  String title = null;
  final Formula formula = Formula.getById(dc, itemId);
  final RawDataType rawDataType = formula.getRawDataType();
  final List<String> expressions = formula.getFormulas();
  final Coloring coloring = formula.getColoring();
  
  final boolean writePermission = formula.hasPermission(Permission.WRITE);
  final boolean deletePermission = formula.hasPermission(Permission.DELETE);
  final boolean sharePermission = formula.hasPermission(Permission.SET_PERMISSION);
  final boolean setOwnerPermission = formula.hasPermission(Permission.SET_OWNER);
  final boolean isOwner = formula.isOwner();
  %>

  <base:page title="<%=title%>">
  <base:head scripts="tabcontrol.js" styles="toolbar.css,headertabcontrol.css,path.css">
    <script language="JavaScript">
    function editItem()
    {
      Main.viewOrEditItem('<%=ID%>', '<%=itemType.name()%>', <%=itemId%>, true);
    }
    function shareItem()
    {
      Main.openPopup('index.jsp?ID=<%=ID%>&cmd=ShareItem&item_id=<%=itemId%>', 'ShareFormula', 500, 400);
    }
    function deleteItem()
    {
      location.replace('index.jsp?ID=<%=ID%>&cmd=DeleteItem&item_id=<%=itemId%>');
    }
    function restoreItem()
    {
      location.replace('index.jsp?ID=<%=ID%>&cmd=RestoreItem&item_id=<%=itemId%>');
    }
    function takeOwnership()
    {
      if (confirm('Are you sure that you want to take ownership of this item? It can\'t be undone.'))
      {
        location.replace('index.jsp?ID=<%=ID%>&cmd=TakeOwnershipOfItem&item_id=<%=itemId%>');
      }
    }
    function runPlugin(cmd)
    {
      Main.openPopup('index.jsp?ID=<%=ID%>&cmd='+cmd+'&item_id=<%=itemId%>', 'RunPlugin'+cmd, 740, 540);
    }
    </script>
  </base:head>
  <base:body>
    <p>
    <p:path>
      <p:pathelement title="Formulas" href="<%="index.jsp?ID="+ID%>" />
      <p:pathelement title="<%=HTML.encodeTags(formula.getName())%>" />
    </p:path>
    
    <t:tabcontrol id="main" active="properties">
    <t:tab id="properties" title="Properties">
    <tbl:toolbar
      >
      <tbl:button 
        disabled="<%=writePermission ? false : true%>" 
        image="<%=writePermission ? "edit.gif" : "edit_disabled.gif"%>" 
        onclick="editItem()" 
        title="Edit&hellip;" 
        tooltip="<%=writePermission ? "Edit this formula" : "You do not have permission to edit this formula"%>" 
      />
      <tbl:button 
        disabled="<%=deletePermission ? false : true%>" 
        image="<%=deletePermission ? "delete.gif" : "delete_disabled.gif"%>" 
        onclick="deleteItem()" 
        title="Delete"
        visible="<%=!formula.isRemoved()%>"
        tooltip="<%=deletePermission ? "Delete this formula" : "You do not have permission to delete this formula"%>" 
      />
      <tbl:button 
        disabled="<%=writePermission ? false : true%>" 
        image="<%=writePermission ? "restore.gif" : "restore_disabled.gif"%>" 
        onclick="restoreItem()" 
        title="Restore"
        visible="<%=formula.isRemoved()%>"
        tooltip="<%=writePermission ? "Restore this formula" : "You do not have permission to restore this formula"%>" 
      />
      <tbl:button 
        disabled="<%=sharePermission ? false : true%>"
        image="<%=sharePermission ? "share.gif" : "share_disabled.gif"%>"
        onclick="shareItem()" 
        title="Share&hellip;" 
        tooltip="<%=sharePermission ? "Share this formula to other user, groups and projects" : "You do not have permission to share this formula"%>"
      />
      <tbl:button 
        disabled="<%=setOwnerPermission ? false : true%>"
        image="<%=setOwnerPermission ? "take_ownership.png" : "take_ownership_disabled.png"%>"
        onclick="takeOwnership()" 
        title="Take ownership&hellip;"
        visible="<%=!isOwner%>"
        tooltip="<%=setOwnerPermission ? "Take ownership of this item" : "You do not have permission to take ownership of this item"%>"
      />
      <tbl:button 
        image="import.gif" 
        onclick="runPlugin('ImportItem')" 
        title="Import&hellip;" 
        tooltip="Import data" 
        visible="<%=pluginCount.containsKey(Plugin.MainType.IMPORT)%>"
      />
      <tbl:button 
        image="export.gif" 
        onclick="runPlugin('ExportItem')" 
        title="Export&hellip;" 
        tooltip="Export data" 
        visible="<%=pluginCount.containsKey(Plugin.MainType.EXPORT)%>"
      />
      <tbl:button 
        image="runplugin.gif" 
        onclick="runPlugin('RunPlugin')" 
        title="Run plugin&hellip;" 
        tooltip="Run a plugin" 
        visible="<%=pluginCount.containsKey(Plugin.MainType.OTHER)%>"
      />
      <tbl:button
        image="help.gif"
        onclick="<%="Main.openHelp('" + ID +"', 'formula.view.properties')"%>"
        title="Help&hellip;"
        tooltip="Get help about this page"
      />
      </tbl:toolbar>
    <div class="boxedbottom">
      <div class="itemstatus">Permissions on this item: <i><%=PermissionUtil.getFullPermissionNames(formula)%></i></div>
      <%
      if (formula.isRemoved() || formula.isShared())
      {
        %>
        <div class="itemstatus">
          <base:icon image="deleted.gif" 
            visible="<%=formula.isRemoved()%>"> This item has been flagged for deletion<br></base:icon>
          <base:icon image="shared.gif" 
            visible="<%=formula.isShared()%>"> This item is shared to other user, groups and/or projects</base:icon>
        </div>
        <%
      }
      %>
      <table class="form" cellspacing=0>
      <tr>
        <td class="prompt">Name</td>
        <td><%=HTML.encodeTags(formula.getName())%></td>
      </tr>
      <tr>
        <td class="prompt">Type</td>
        <td><%=formula.getFormulaType()%></td>
      </tr>
      <tr>
        <td class="prompt">Parser</td>
        <td><%=formula.getParser()%></td>
      </tr>
      <tr>
        <td class="prompt">Raw data type</td>
        <td><%=rawDataType == null ? "<i>- none -</i>" : HTML.encodeTags(rawDataType.getName())%></td>
      </tr>
      <tr>
        <td class="prompt">Channels</td>
        <td><%=formula.getChannels()%></td>
      </tr>
      <tr valign="baseline">
        <td class="prompt">Expressions</td>
        <td>
          <%
          for (int i = 0; i < expressions.size(); ++i)
          {
            %>
            <%=(i+1) + ": " + HTML.encodeTags(expressions.get(i))%><br>
            <%
          }
          %>
        </td>
      </tr>
      <tr>
        <td class="prompt">Use coloring</td>
        <td>
          <%=coloring.isUsingColors() ? "yes" : "no"%>
          <%
          if (coloring.isUsingColors())
          {
            %>
            <b>Range</b> 
            [<%=Values.formatNumber(coloring.getMinValue(), 2)%>,
            <%=Values.formatNumber(coloring.getMidValue(), 2)%>,
            <%=Values.formatNumber(coloring.getMaxValue(), 2)%>]
            <b>Logarithmic</b> <%=coloring.isLogarithmic() ? "yes" : "no" %>
            <%
          }
          %>
        </td>
      </tr>
      <tr>
        <td class="prompt">Owner</td>
        <td><base:propertyvalue item="<%=formula%>" property="owner" /></td>
      </tr>
      <tr>
        <td class="prompt">Description</td>
        <td><%=HTML.niceFormat(formula.getDescription())%></td>
      </tr>
      </table>

    </div>
    </t:tab>
    </t:tabcontrol>

  </base:body>
  </base:page>
  <%
}
finally
{
  if (dc != null) dc.close();
}

%>