Changeset 4005 for trunk/doc/src/docbook/appendix/raw_data_types.xml

Timestamp:

Nov 26, 2007, 4:00:38 PM (15 years ago)

Author:

Martin Svensson

Message:

Fixes #596 Read "Appendix: raw-data-types.xml reference"

File:

• trunk/doc/src/docbook/appendix/raw_data_types.xml (modified) (6 diffs)

trunk/doc/src/docbook/appendix/raw_data_types.xml

@@ -113 +113 @@
       doesn't. If it supports import, it may be locked to specific raw data type
       or it may use any raw data type. Among the default platforms installed with
-      BASE, the Affymetrix platform doesn't support importing data. The Generic platform
-      supports importing to any raw data type.
+      BASE, the Affymetrix platform doesn't support importing data while the Generic 
+      platform supports importing to any raw data type.
     </para>
     
@@ -129 +129 @@
       you do it before the first initialisation of the database.
       It is possible to change the configuration of an existing BASE installation but it
-      requires manual updates to the database. Follow this procedure:
+      requires manual updates to the database. Following procedure covers how to update:
     </para>
 
@@ -157 +157 @@
     
     <tip>
-      <title>Create a parallell installation</title>
+      <title>Create a parallel installation</title>
       <para>
-      You can always create a new temporary parallell installation to check 
+      You can always create a new temporary parallel installation to check 
       what the table generated by installation script looks like. Compare the 
       new table to the existing one and make sure they match.
@@ -183 +183 @@
   <bridgehead>Format of the raw-data-types.xml file</bridgehead>
   <para>
-    The <filename>raw-data-types.xml</filename> is an XML file.
-    The following example will serve as a description of the format:
+    The following example will serve as a description of the format used in
+    <filename>raw-data-types.xml</filename>:
   </para>
-  
-  
+
+
   <programlisting language="xml">
 <![CDATA[
@@ -268 +268 @@
           <entry>
             A unique name of the raw data type. The name is usually used by client
-            applications for disaplay.
+            applications for display.
           </entry>
         </row>
@@ -348 +348 @@
       Following the <sgmltag class="starttag">property</sgmltag> tags comes 0
       or more <sgmltag class="starttag">intensity-formula</sgmltag> tags.
-      Each one defines mathematical formulas that can be used to create
-      calculate the intensity values from the raw data. In the Genepix, case
+      Each one defines mathematical formulas that can be used to
+      calculate the intensity values from the raw data. In the Genepix case,
       there are several formulas which differs in the way background is 
-      subtracted from foregorund intensity values. For other raw data
+      subtracted from foreground intensity values. For other raw data
       types, the intensity formula may just copy one of the raw data values.
     </para>