Changeset 5081


Ignore:
Timestamp:
Aug 27, 2009, 1:08:04 PM (13 years ago)
Author:
Nicklas Nordborg
Message:

References #1362: Validate the number of raw data spots against the number of array design features

Need to ignore this test with Affymetrix data since the array design has the number of probesets while the raw bioassay has the number of cells. The numbers are very different since one probeset is made up of multiple cells.

Location:
branches/2.13-stable
Files:
2 edited

Legend:

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  • branches/2.13-stable/doc/test/roles/index.html

    r4889 r5081  
    18861886      <td><code>Warning</code></td>
    18871887    </tr>
     1888    <tr>
     1889      <td>Other - Raw spots &lt;&gt; features</td>
     1890      <td><code>Ignore</code></td>
     1891    </tr>
    18881892    </table>
    18891893   
  • branches/2.13-stable/src/test/net/sf/basedb/test/roles/AnalysisTest.java

    r4768 r5081  
    8787      options.setSeverity(Validator.MISSING_HARDWARE, Severity.IGNORE);
    8888      options.setSeverity(Validator.MISSING_PROTOCOL, Severity.IGNORE);
     89      options.setSeverity(Validator.NONMATCHING_SPOTCOUNT, Severity.IGNORE);
    8990      GenericOverview affyOverview = getExperimentOverview(dc, affyExperiment,
    9091        activeProject, options, 2);
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