Changeset 5457


Ignore:
Timestamp:
Oct 28, 2010, 2:55:53 PM (12 years ago)
Author:
Nicklas Nordborg
Message:

References #1532: Add bioplate type to bioplates

Updated database diagram to reflect the latest changes and the removal of bioplate events.

Location:
trunk/doc/src
Files:
3 edited

Legend:

Unmodified
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  • trunk/doc/src/docbook/developerdoc/api_overview.xml

    r5408 r5457  
    18161816   
    18171817    <sect2 id="data_api.biomaterials">
    1818       <title>Biomateria LIMS</title>
     1818      <title>Biomaterial LIMS</title>
    18191819     
    18201820      <sect3 id="data_api.biomaterials.uml">
     
    19481948        </orderedlist>
    19491949      </sect3>
     1950 
     1951      <sect3 id="data_api.biomaterials.plates">
     1952        <title>Bioplates and plate types</title>
     1953       
     1954        <para>
     1955          Biomaterial (except biosource) may optionally be placed on <classname
     1956          docapi="net.sf.basedb.core.data">BioPlateData</classname>:s. A bioplate is something
     1957          that collects multiple biomaterial as a unit. A bioplate typically has a
     1958          <classname docapi="net.sf.basedb.core.data">PlateGeometryData</classname> that
     1959          determines the number of locations on the plate (<classname docapi="net.sf.basedb.core.data">BioWellData</classname>).
     1960          A single well can hold a single biomaterial at a time.
     1961        </para>
     1962       
     1963        <para>
     1964          The bioplate must be of a specific <classname docapi="net.sf.basedb.core.data">BioPlateTypeData</classname>.
     1965          The type can be used to put limitations on how the plate can be used. For example,
     1966          it can be limited to a single type of biomaterial. It is also possible to lock wells
     1967          so that the biomaterial in them can't be changed. Supported lock modes are:
     1968        </para>
     1969       
     1970        <itemizedlist>
     1971        <listitem>
     1972          <para>
     1973          <emphasis>Unlocked</emphasis>: Wells are unlocked and the biomaterial may be changed
     1974          any number of times.
     1975          </para>
     1976        </listitem>
     1977        <listitem>
     1978          <para>
     1979          <emphasis>Locked-after-move</emphasis>: The well is locked after it has been used one
     1980          time and the biomaterial that was put in it has been moved to another plate.
     1981          </para>
     1982        </listitem>
     1983        <listitem>
     1984          <para>
     1985          <emphasis>Locked-after-add</emphasis>: The well is locked after biomaterial has been
     1986          put into it. It is not possible to remove the biomaterial.
     1987          </para>
     1988        </listitem>
     1989        <listitem>
     1990          <para>
     1991          <emphasis>Locked-after-create</emphasis>: The well is locked once it has been created.
     1992          Biomaterial must be put into wells before the plate is saved to the database.
     1993          </para>
     1994        </listitem>
     1995        </itemizedlist>
     1996       
     1997      </sect3>
     1998 
    19501999 
    19512000    </sect2>
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