Changeset 6964
- Timestamp:
- Oct 2, 2015, 8:43:20 AM (7 years ago)
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- 1 edited
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trunk/doc/src/docbook/appendix/incompatible.xml
r6807 r6964 35 35 and backwards compatible. 36 36 </para> 37 38 <sect1 id="appendix.incompatible.3.6"> 39 <title>BASE 3.6 release</title> 40 41 <bridgehead id="appendix.incompatible.cloned-annotation">Cloned annotations</bridgehead> 42 <para> 43 A new feature that allows an inherited annotation to be cloned has been implemented. 44 Several methods in <classname docapi="net.sf.basedb.core">AnnotationSet</classname>, 45 <classname docapi="net.sf.basedb.core.snapshot">AnnotationSnapshot</classname> and some 46 other classes has been deprecated and replaced with new methods. Existing code that 47 is not aware of cloned annotations should continue to work, but may experience some 48 inconsistent behaviour in case the cloned values are out-of-sync with the original 49 values. 50 </para> 51 52 <bridgehead id="appendix.incompatible.experimental-factors">Experimental factors have moved</bridgehead> 53 <para> 54 To allow the owner of an experiment to manage experimental factor values as part 55 of the experiment, the <classname docapi="net.sf.basedb.core">RootRawBioassay</classname> 56 item was introduced. The new item is a one-to-one representation of a <classname 57 docapi="net.sf.basedb.core">RawBioAssay</classname> inside that experiment. 58 Experimental factor values that are found on existing raw bioassays are copied to the 59 root rawbioassays when updating BASE. Changes made after the update will only 60 affect the root raw bioassays. Existing code that is not aware of root raw bioassays 61 may not find the experimental factor values. 62 </para> 63 64 </sect1> 37 65 38 66 <sect1 id="appendix.incompatible.3.5">
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