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Diff Rev Age Author Log Message
(edit) @3053   16 years Martin Svensson Removed the coreplugins.html from the doc/user/ catalog.
(edit) @3052   16 years Martin Svensson Fixes #459 Better error message if plugin jar can't be found
(edit) @3051   16 years Nicklas Nordborg References #262 and #340: Some minor improvements and fixes
(edit) @3050   16 years Nicklas Nordborg References #440: Update to latest versions of 3rd-party software …
(edit) @3049   16 years Nicklas Nordborg References #464: Permission denied when creting AnyToAny? I think this …
(edit) @3048   16 years Martin Svensson Extended the plugin-list. All core plugins are now in the list. Left …
(edit) @3047   16 years Martin Svensson First version of a list with all core plugins in BASE2
(edit) @3046   16 years Martin Svensson References #146 Added one more edit tool for links
(edit) @3045   16 years Nicklas Nordborg References #262 and #340. The overview and validation is now complete. …
(edit) @3044   16 years Nicklas Nordborg Return each inherited annotation only once
(edit) @3043   16 years dominic
(edit) @3042   16 years dominic tab2mage export with the systen out messages revoved
(edit) @3041   16 years Martin Svensson Misspelt style name
(edit) @3040   16 years Martin Svensson References #146 Finished with making the help-text writing more easy. …
(edit) @3039   16 years Nicklas Nordborg Added web services for listing projects and experiments
(edit) @3038   16 years dominic
(edit) @3037   16 years dominic
(edit) @3036   16 years Martin Svensson Reference #146 Beginning of tools to make it more easy editing the …
(edit) @3035   16 years Johan Enell References #439
(edit) @3034   16 years Nicklas Nordborg Reverted last change since it appears that Eclipse messed with this …
(edit) @3033   16 years Nicklas Nordborg References #262, #340: First prototype for experiment overview. Reads …
(edit) @3032   16 years Johan Enell The header regexp was mixed up between genepix cy3/cy5 and genepix cy5/cy3
(edit) @3031   16 years dominic
(edit) @3030   16 years Nicklas Nordborg Fixed some problems with loading array slide and hybiridization in one …
(edit) @3029   16 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly …
(edit) @3028   16 years Nicklas Nordborg Fixed number parsing problems with int/long and double/float
(edit) @3027   16 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly …
(edit) @3026   16 years Jari Häkkinen Changed src install instructions to use 'ant package.bin'
(edit) @3025   16 years Jari Häkkinen Changed src install instructions to use 'ant package.bin'
(edit) @3024   16 years Nicklas Nordborg References #262 and #340. Added draft specification
(edit) @3023   16 years Nicklas Nordborg Fixes #311: Allow parsing of numbers with different locale settings
(edit) @3022   16 years dominic
(edit) @3021   16 years Martin Svensson Replaced 'Most recent' in the menu bar with an icon
(edit) @3020   16 years Nicklas Nordborg Yet another stylesheet fix
(edit) @3019   16 years Nicklas Nordborg More fixes to menu stylesheet
(edit) @3018   16 years Nicklas Nordborg Fixed menubar height since the images didn't fit.
(edit) @3017   16 years Martin Svensson Added a 'refresh-page'- button to the menu bar.
(edit) @3016   16 years Nicklas Nordborg Removed 'bin' from ignore properties and added 'testdata'
(edit) @3015   16 years Nicklas Nordborg Fixes #405: Highlight function in plot tool
(edit) @3014   16 years Nicklas Nordborg Fixed problem with aborting a file upload
(edit) @3013   16 years Martin Svensson Fixes #98 "Excluded" items are still included if a list is exported
(edit) @3012   16 years Martin Svensson References #444.Added the check of existing path for this plugin too.
(edit) @3011   16 years Martin Svensson Fixes #444 Plugins should check that they are allowed to …
(edit) @3010   16 years Nicklas Nordborg References #454: File upload times out Use Ajax for updating the …
(edit) @3009   16 years dominic
(edit) @3008   16 years Nicklas Nordborg References #454: File upload times out Changed the way progress …
(edit) @3007   16 years Nicklas Nordborg Fixed bug in DbControl?.rollback() method when disconnected from the …
(edit) @3006   16 years Nicklas Nordborg First go at a webservices framework.
(edit) @3005   16 years Martin Svensson Fixes #455 Empty date field is not accepted at several places.
(edit) @3004   16 years Martin Svensson Fixes #374 Restoring a Bioassayset or Transformation restores all …
(edit) @3003   16 years Nicklas Nordborg References #454: File upload times out Possible fix but have to be …
(edit) @3002   16 years dominic
(edit) @3001   16 years Jari Häkkinen Creating a new branch for web services development.
(edit) @3000   16 years Jari Häkkinen Creating a new branch for tab2mage development.
(edit) @2999   16 years Nicklas Nordborg Fixes #453: End date is not allowed to be empty
(edit) @2998   16 years Nicklas Nordborg References #215: Incorrect use of DynamicSpotQuery?... Fixed problem …
(edit) @2997   16 years Jari Häkkinen Removing obsolete branch.
(edit) @2996   16 years Jari Häkkinen Deleting outdated branch.
(edit) @2995   16 years Jari Häkkinen Bumped version to 2.1.2pre
(edit) @2994   16 years Nicklas Nordborg Fixed bug when web.xml wansn't found in config/local
(edit) @2993   16 years Nicklas Nordborg Fixes #215: Incorrect use of DynamicSpotQuery? in table view, plot …
(edit) @2992   16 years Johan Enell Merged log:branches/2.1#2846:2990 trunk.
(edit) @2991   16 years Jari Häkkinen New bug fix branch for 2.1
(edit) @2990   16 years Jari Häkkinen Tagging version 2.1.1
(edit) @2989   16 years Jari Häkkinen Set version to 2.1.1
(edit) @2988   16 years Johan Enell Fixes #433
(edit) @2987   16 years Johan Enell Fixes #429 BioAssaySetExporter? can export a serial basefile not merged …
(edit) @2986   16 years Johan Enell Added jep function for spot position
(edit) @2985   16 years Johan Enell Implements to methods to sort the enumeration on keys or values
(edit) @2984   16 years Nicklas Nordborg Use the default error handling when nothing else has been specified
(edit) @2983   16 years Nicklas Nordborg Fixed incorrect generation of build.xml in source distribution
(edit) @2982   16 years Nicklas Nordborg Fixed compilation error
(edit) @2981   16 years Nicklas Nordborg Fixes #447: Fix javadoc warnings
(edit) @2980   16 years Johan Enell addded nullcheck
(edit) @2979   16 years Nicklas Nordborg Need to generate hibernate mappings for test programs
(edit) @2978   16 years Nicklas Nordborg Added session="false" to all jsp pages so we no longer generate …
(edit) @2977   16 years Nicklas Nordborg Fixes #138: Write documentation: 5c) Authentication plug-ins
(edit) @2976   16 years Nicklas Nordborg Fixed some spelling errors and added links to Javadoc
(edit) @2975   16 years Nicklas Nordborg Updated configuration files with correct column mappings.
(edit) @2974   16 years Nicklas Nordborg Fixed issues with incorrect column mappings and swithced channels in …
(edit) @2973   16 years Nicklas Nordborg Fixes #449: Innherit BASE 1 sample annotations to BASE 2 RawBioAssays? …
(edit) @2972   16 years Nicklas Nordborg References #383 and #412. Include some files from the misc directory …
(edit) @2971   16 years Nicklas Nordborg Added svn.ignore
(edit) @2970   16 years Nicklas Nordborg Fixes #440: Update to latest versions of 3rd-party software Verified …
(edit) @2969   16 years Nicklas Nordborg Fixes #448: Setting 'Used quantity' for pooled sources of sample, …
(edit) @2968   16 years Nicklas Nordborg Removed unused file
(edit) @2967   16 years Nicklas Nordborg References #440: Update to latest versions of 3rd-party software …
(edit) @2966   16 years Nicklas Nordborg References #440: Update to latest versions of 3rd-party software …
(edit) @2965   16 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly …
(edit) @2964   16 years Jari Häkkinen Fixes #430. Finalized export ... fixed experimental factor output. …
(edit) @2963   16 years Nicklas Nordborg Added link to BASE web site
(edit) @2962   16 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly …
(edit) @2961   16 years Johan Enell References #429
(edit) @2960   16 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly Get …
(edit) @2959   16 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly
(edit) @2958   16 years Nicklas Nordborg Fixed permission problem when a plugin tries to access annotation values.
(edit) @2957   16 years Nicklas Nordborg Fixes #443: raw bioassay data not linked to LIMS kills Feature.getWell …
(edit) @2956   16 years Jari Häkkinen Addresses #430. Most things fixed for export but experimental factors …
(edit) @2955   16 years Jari Häkkinen Minor clarification for genepix reporter map imports.
(edit) @2954   16 years Jari Häkkinen Improved Genepix information in the getting started doc.
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