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Diff Rev Age Author Log Message
(edit) @3675   16 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
(edit) @3674   16 years Jari Häkkinen Added Dominic to .svndigest config.
(edit) @3673   16 years Jari Häkkinen Updated .svndigest config.
(edit) @3672   16 years Jari Häkkinen Removed obsolete links and information.
(edit) @3671   16 years Jari Häkkinen Fixes #656. New release procedures are added to wiki:ReleaseProcedure.
(edit) @3670   16 years Nicklas Nordborg Included numbers with scientific notation in the test.
(edit) @3669   16 years Jari Häkkinen Removing obsolete file.
(edit) @3668   16 years Martin Svensson Fixes #724 Nullpointer exception when 'overwrite' is not set in …
(edit) @3667   16 years Nicklas Nordborg Display free memory before AND after System.gc().
(edit) @3666   16 years Nicklas Nordborg References #469: Added negative numbers to test case with dirty data
(edit) @3665   16 years Martin Svensson Fixes #514 Change permissions in Power User
(edit) @3664   16 years Nicklas Nordborg Fixes #722: Create DynamicReporterQuery?
(edit) @3663   16 years Nicklas Nordborg Measure performance for reporter migration.
(edit) @3662   16 years Martin Svensson Fixes #551 Read "Plugin developer" section
(edit) @3661   16 years Nicklas Nordborg References #720: Progress reporter when emptying trashcan Progress …
(edit) @3660   16 years Martin Svensson Fixes #595 Read "Appendix: extended-properties.xml reference"
(edit) @3659   16 years Nicklas Nordborg References #294: Performance testing Added framework for testing BASE …
(edit) @3658   16 years Nicklas Nordborg Show stacktrace when a plug-in reports an error
(edit) @3657   16 years Nicklas Nordborg Migrate reporters first.
(edit) @3656   16 years Nicklas Nordborg Fixes #719: Add support for JEP if() function
(edit) @3655   16 years Nicklas Nordborg Fixes #720: Progress reporter when emptying trashcan
(edit) @3654   16 years Jari Häkkinen Copying another missing file from trunk.
(edit) @3653   16 years Jari Häkkinen Merged log:trunk#3581:3649 into the wwebservices branch.
(edit) @3652   16 years Jari Häkkinen Adding missing files. These files exist in trunk but was not included …
(edit) @3651   16 years Jari Häkkinen Fixed svn properties issues.
(edit) @3650   16 years Nicklas Nordborg Fixed performance problem with reporter migration. Added support for …
(edit) @3649   16 years Nicklas Nordborg Make sure list of formulas get loaded to avoid …
(edit) @3648   16 years Peter Johansson refs #639 removing the exportPlainMatrix method.
(edit) @3647   16 years Nicklas Nordborg Fixes #718: BioAssaySet? tries to calculate number of spots and …
(edit) @3646   16 years Nicklas Nordborg References #451: Zipped download Fixed test program and added it to …
(edit) @3645   16 years Peter Johansson refs #639 stupid version of exportPureMatrix method that simply …
(edit) @3644   16 years Nicklas Nordborg Fixes #716: Plugin configuration import should be able ot set the …
(edit) @3643   16 years Nicklas Nordborg Fixes #451: Zipped download Added user and plug-in developer documentation
(edit) @3642   16 years Nicklas Nordborg Fixes #715: Install should set same permission on plugin …
(edit) @3641   16 years Nicklas Nordborg References #451: Zipped download Major redesign of the packing …
(edit) @3640   16 years Johan Enell a plugin can have no parameters
(edit) @3639   16 years Johan Enell Fixes #714
(edit) @3638   16 years Nicklas Nordborg Fixes #713: Differences in the configuration file from base1
(edit) @3637   16 years Nicklas Nordborg Fixes #710: Allow subclasses to AbstractFlatFileParser? to participate …
(edit) @3636   16 years Nicklas Nordborg References #486: Added Jeremy Davis-Turak to credits.txt for helping …
(edit) @3635   16 years Nicklas Nordborg References #358: Better info from Migration tool Show log message …
(edit) @3634   16 years Nicklas Nordborg Fixes #573: Trim whitespace when checking for unique values
(edit) @3633   16 years Nicklas Nordborg References #574. Test program didn't report error properly
(edit) @3632   16 years Johan Enell Fixes #713
(edit) @3631   16 years Nicklas Nordborg Fixes #701: JarClassLoader? should be able to auto-reload based on timestamp
(edit) @3630   16 years Nicklas Nordborg Fixes #704: Make sure DbControl? is closed from www/common/import/index.jsp
(edit) @3629   16 years Nicklas Nordborg Fixes #712, References #711
(edit) @3628   16 years Nicklas Nordborg References #625: PrintMapFlatFileImporter?.isInContext now checks if …
(edit) @3627   16 years Nicklas Nordborg References #709: Forgot to add predefined query
(edit) @3626   16 years Nicklas Nordborg Fixes #486: Import raw data from the Illumina platform
(edit) @3625   16 years Nicklas Nordborg Fixes #709: Install should install missing plug-in configurations when …
(edit) @3624   16 years Nicklas Nordborg Fixes #708: "NaN" and "Infinity" values in files causes SqlException?
(edit) @3623   16 years Johan Enell References #706 Added average for genepix.flags
(edit) @3622   16 years Johan Enell Fixes #700, #590
(edit) @3621   16 years Nicklas Nordborg Fixes #669
(edit) @3620   16 years Nicklas Nordborg Fixes #705: Add preset to "Test with file" for regular expression that …
(edit) @3619   16 years Nicklas Nordborg Include test for selecting a parameter expression in SQL: SELECT …
(edit) @3618   16 years Nicklas Nordborg Fixes #702: Add lineNum() function(s) to mapping expressions supported …
(edit) @3617   16 years Nicklas Nordborg Fixes #703: Error message when loading invalid XML files doesn't …
(edit) @3616   16 years Nicklas Nordborg References #698: Fix Javadoc warnings Removed all existing warnings. …
(edit) @3615   16 years Nicklas Nordborg Fixes #691: Make LowessNormalization? and MedianRatioNormalization? …
(edit) @3614   16 years Johan Enell Fixes #699
(edit) @3613   16 years Johan Enell Fixes #673
(edit) @3612   16 years Nicklas Nordborg References #595: Write "Appendix: extended-properties.xml reference" …
(edit) @3611   16 years Nicklas Nordborg References #191: Added callto: link to skype contact
(edit) @3610   16 years Nicklas Nordborg References #360: Make subsections on view pages hideable …
(edit) @3609   16 years Peter Johansson refs #551 - replaced it's with its where appropriate
(edit) @3608   16 years Nicklas Nordborg Fixes #498: Move Array batches on Array design view page
(edit) @3607   16 years Nicklas Nordborg References #551: Write "Plugin developer" section Now ready for reading.
(edit) @3606   16 years Nicklas Nordborg Fixes #697: Uploading and unpacking a compressed file corrupts the file
(edit) @3605   16 years Peter Johansson improved spelling
(edit) @3604   16 years Nicklas Nordborg Fixes #257: Fix the Jep.nodeToExpression method
(edit) @3603   16 years Nicklas Nordborg Undo last commit which was done by accident.
(edit) @3602   16 years Nicklas Nordborg
(edit) @3601   16 years Nicklas Nordborg References #692: Fixes possible NullPointerException? in update
(edit) @3600   16 years Nicklas Nordborg Fixes #480: Verify values in extended-properties.xml and raw-data-types.xml
(edit) @3599   16 years Nicklas Nordborg Fixes #696: Change icon for 'hidden filter' warning
(edit) @3598   16 years Nicklas Nordborg Fixes #566: Plugins using the flat file parser should warn about …
(edit) @3597   16 years Nicklas Nordborg Fixes #655: Plugins -> defintions fails with 'illegal attempt to …
(edit) @3596   16 years Nicklas Nordborg Fixes #654: Batch deletion of reporters
(edit) @3595   16 years Nicklas Nordborg Fixes #694: Creating a new plate event generates an exception
(edit) @3594   16 years Nicklas Nordborg Fixes #626: Remove base1executor any to any links
(edit) @3593   16 years Nicklas Nordborg Fixes #692: Jobs that are part of an experiment should use permissions …
(edit) @3592   16 years Nicklas Nordborg Fixes #687: Make it possible for other plug-ins than the FormulaFilter? …
(edit) @3591   16 years Nicklas Nordborg References #551. Moved doc about secondary storage controllers from …
(edit) @3590   16 years Nicklas Nordborg Fixes #688: Don't use Float.valueOf() or Float.parseString() to parse …
(edit) @3589   16 years Nicklas Nordborg Fixes #693: Select import plug-in dialog should not display …
(edit) @3588   16 years Nicklas Nordborg Fixes #326: Mass annotation plug-in
(edit) @3587   16 years Martin Svensson References #686 Two more coreplugins are updated …
(edit) @3586   16 years Nicklas Nordborg References #326: Mass annotation plug-in Major features in place. …
(edit) @3585   16 years Martin Svensson Fixes #685 The documentation is done
(edit) @3584   16 years Martin Svensson References #686 Updated gui contexts in JepExtraValueCalculator? to …
(edit) @3583   16 years Martin Svensson References #686 Jep Formula Filter and JepExtraValueCalculator? can now …
(edit) @3582   16 years Jari Häkkinen Reverting build.xml, accidental last checkin of build.xml
(edit) @3581   16 years Jari Häkkinen Merged log:trunk#3533:3580 into the wwebservices branch.
(edit) @3580   16 years Nicklas Nordborg Fixes #690: Not allowed to read Extra value type
(edit) @3579   16 years Nicklas Nordborg Fixed incorrect tooltip for "Extra value types" menu item
(edit) @3578   16 years Nicklas Nordborg Fixes #690: Not allowed to read Extra value type
(edit) @3577   16 years Peter Johansson fixed typo in docs
(edit) @3576   16 years Martin Svensson References #451 Avoid null pointer exception
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