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Diff Rev Age Author Log Message
(edit) @4384   15 years Nicklas Nordborg References #1032: Apache server complains "Request-URI Too Large" …
(edit) @4383   15 years Martin Svensson Fixed javadoc warnings
(edit) @4382   15 years Nicklas Nordborg Fixes #1069: New mode for Import reporters to reporterlist - Add …
(edit) @4381   15 years Nicklas Nordborg Fixes #1081: Document how to configure Tomcat 6.0.18
(edit) @4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
(edit) @4379   15 years Nicklas Nordborg References #1082: Make it possible to re-enter parameters for a failed …
(edit) @4378   15 years Nicklas Nordborg References #1064, #1082, #1050, #1024, #967 Updated UML diagrams as a …
(edit) @4377   15 years Nicklas Nordborg References #1066: Reset all filters functionality request Added …
(edit) @4376   15 years Nicklas Nordborg Fixes #1066: Reset all filters functionality request
(edit) @4375   15 years Nicklas Nordborg Fixes #1078: Copyright in 'About' BASE should contain year 2008
(edit) @4374   15 years Nicklas Nordborg Fixes #1046: Remember closed/expanded node status in the hierarchical …
(edit) @4373   15 years Nicklas Nordborg Fixes #1071: Help text for default configuration selection for …
(edit) @4372   15 years Nicklas Nordborg References #1028: Plug-in for batch upload/modification of items …
(edit) @4371   15 years Nicklas Nordborg Merged patch release 2.7.2 to the trunk.
(edit) @4370   15 years Jari Häkkinen Changes for the future release 2.7.3
(edit) @4369   15 years Jari Häkkinen Tagging version 2.7.2
(edit) @4368   15 years Jari Häkkinen Preparing release 2.7.2
(edit) @4367   15 years Jari Häkkinen Fixes #1077. Changed help text on step parameter, also changed default …
(edit) @4366   15 years Nicklas Nordborg References #1028: Plug-in for batch upload/modification of items …
(edit) @4365   15 years Jari Häkkinen Minor changes to text.
(edit) @4364   15 years Nicklas Nordborg References #1077: Lowess normalization broken Added warning in update …
(edit) @4363   15 years Jari Häkkinen Addresses #1077. A couple of more issues found. Further quality …
(edit) @4362   15 years Jari Häkkinen Fixes #1074.
(edit) @4361   15 years Nicklas Nordborg References #1077: Lowess normalization broken Added script for …
(edit) @4360   15 years Jari Häkkinen Fixes #1077.
(edit) @4359   15 years Nicklas Nordborg Fixes #1076: Backwards incompatible change in MedianRatioNormalization? …
(edit) @4358   15 years Nicklas Nordborg Fixes #1075: Lowess normaliztion fails on trunk but works on latest …
(edit) @4357   15 years Nicklas Nordborg References #1072: Core plug-in versions should follow BASE versions …
(edit) @4356   15 years Nicklas Nordborg Fixes #1072: Core plug-in versions should follow BASE versions
(edit) @4355   15 years Nicklas Nordborg Fixes #1073: Store current plug-in version when running a job
(edit) @4354   15 years Nicklas Nordborg Fixes #1070: Excess memory usage when creating root bioassayset with …
(edit) @4353   15 years Nicklas Nordborg References #1070: Excess memory usage when creating root bioassayset …
(edit) @4352   15 years Nicklas Nordborg Fixes #1068: Sorting spotdata on a formula-based column where the …
(edit) @4351   15 years Nicklas Nordborg Fixes #1067: Can't display spot-data columns that are based on …
(edit) @4350   15 years Jari Häkkinen Fixes #1062.
(edit) @4349   15 years Nicklas Nordborg References #1037: Add 'id' column to all list pages Fixed incorrect …
(edit) @4348   15 years Nicklas Nordborg References #1038: Provide manual parameter for 'spotsize' in GAL …
(edit) @4347   15 years Nicklas Nordborg Merged patch release 2.7.1 to the trunk
(edit) @4346   15 years Nicklas Nordborg Changes for future release 2.7.2
(edit) @4345   15 years Nicklas Nordborg Tagging version 2.7.1
(edit) @4344   15 years Nicklas Nordborg Preparing release 2.7.1
(edit) @4343   15 years Martin Svensson References #1010
(edit) @4342   15 years Martin Svensson Fixes #1010
(edit) @4341   15 years Nicklas Nordborg Fixes #1056: Disk usage does not seem to report disk usage properly …
(edit) @4340   15 years Nicklas Nordborg Fixes #1054: Make it possible for the annotation importer to identify …
(edit) @4339   15 years Nicklas Nordborg Fixes #1058: Metadata.getPropertyValue() fails to get value for the …
(edit) @4338   15 years Nicklas Nordborg Fixes #1051: Add support in the GUI for accssing files used to store …
(edit) @4337   15 years Nicklas Nordborg Fixes #1052: Core analysis plug-ins need to be aware of bioassaysets …
(edit) @4336   15 years Martin Svensson Fixes #1049 Add the 'quadratic mean' to available Avg. method's for …
(edit) @4335   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
(edit) @4334   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
(edit) @4333   15 years Martin Svensson Fixes #1037 Add 'id' column to all list pages
(edit) @4332   15 years Martin Svensson References #1037 Most of the list pages can now show an item's ID.
(edit) @4331   15 years Martin Svensson References #1037 The most important list pages are done.
(edit) @4330   15 years Martin Svensson Fixes #1010 Display progress reporter for plug-ins that are executing …
(edit) @4329   15 years Nicklas Nordborg Fixes #1047: Type.BOOLEAN.parseString() doesn't convert strings as expected
(edit) @4328   15 years Nicklas Nordborg Fixes #1053: Values.getBoolean() is case-sensitive
(edit) @4327   15 years Martin Svensson References #1010 Using the SimpleProgressReporter? to get progress of …
(edit) @4326   15 years Nicklas Nordborg Fixes #1045. References #1016.
(edit) @4325   15 years Nicklas Nordborg Fixes #1038: Provide manual parameter for 'spotsize' in GAL exporter
(edit) @4324   15 years Nicklas Nordborg Fixes #532.
(edit) @4323   15 years Nicklas Nordborg Fixes #1043: JarClassLoader?.getInstance() doesn't create a new class …
(edit) @4322   15 years Nicklas Nordborg Fixes #1042: Improve error handling in the extensions system
(edit) @4321   15 years Nicklas Nordborg Fixes #1041: ZipException?: error in opening zip file in JarClassLoader? …
(edit) @4320   15 years Nicklas Nordborg References #1036: Implement 'service' extension point Now it is ready …
(edit) @4319   15 years Nicklas Nordborg Fixes #1040: Exceptions when stopping Tomcat
(edit) @4318   15 years Jari Häkkinen Addresses #639. Exporting plain matrix for 1 and 2 channel data.
(edit) @4317   15 years Nicklas Nordborg Fixes #1022: Add support for using regular expressions in queries
(edit) @4316   15 years Jari Häkkinen Removed obsolete/stray code.
(edit) @4315   15 years Nicklas Nordborg Fixes #1035: Exception when applying filter on multiple Item type in …
(edit) @4314   15 years Nicklas Nordborg Fixes #967: Assign the parent directory permissions to new …
(edit) @4313   15 years Nicklas Nordborg References #981: Share all subdirectories and files when sharing a …
(edit) @4312   15 years Nicklas Nordborg Fixes #981: Share all subdirectories and files when sharing a directory
(edit) @4311   15 years Nicklas Nordborg Fixes #1024: Allow users to select a specific job-agent when creating …
(edit) @4310   15 years Jari Häkkinen Fixes #1034
(edit) @4309   15 years Martin Svensson References #532. Chapter is ready to be read.
(edit) @4308   15 years Jari Häkkinen Fixes #1030. User selects scaling/subtraction depending on whether …
(edit) @4307   15 years Martin Svensson References #532. Written main part of the Job section
(edit) @4306   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
(edit) @4305   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
(edit) @4304   15 years Nicklas Nordborg Fixes #1027: Annotation importer should be able to remove annotations
(edit) @4303   15 years Martin Svensson Fixes #987 NullPointerException? in "Test with file" function if no …
(edit) @4302   15 years Nicklas Nordborg References #1016: Filter table using a reporter list I think this …
(edit) @4301   15 years Nicklas Nordborg References #1019: Reporter list manager - Create reporter list using …
(edit) @4300   15 years Martin Svensson Removed debug-code
(edit) @4299   15 years Nicklas Nordborg Fixes #1020: A reporter list should hold the number of reporters in it
(edit) @4298   15 years Nicklas Nordborg Merged pre-2.7-release to the trunk.
(edit) @4297   15 years Nicklas Nordborg Changes for future release 2.7.1
(edit) @4296   15 years Nicklas Nordborg Tagging version 2.7
(edit) @4295   15 years Nicklas Nordborg Preparing relese 2.7
(edit) @4294   15 years Nicklas Nordborg References #932: Convert the MeV launcher to an extension Removed MeV …
(edit) @4293   15 years Nicklas Nordborg References #932: Convert the MeV launcher to an extension Updated …
(edit) @4292   15 years Nicklas Nordborg Fixes #997: Read and update installation/upgrade instructions
(edit) @4291   15 years Nicklas Nordborg Some minor changes to test procedures
(edit) @4290   15 years Nicklas Nordborg References #1011: Select multiple alternatives for a filter with a …
(edit) @4289   15 years Nicklas Nordborg References #933: Create extension points for some selected places in …
(edit) @4288   15 years Nicklas Nordborg Fixes #1026: Test programs that need the extended test data should …
(edit) @4287   15 years Nicklas Nordborg Deleting obsolete branches
(edit) @4286   15 years Nicklas Nordborg Changes for future release 2.8
(edit) @4285   15 years Nicklas Nordborg Forking new minor version 2.7 branch
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