# # ChangeLog for trunk/bin/migrate_from_1.2.sh # # Generated by Trac 1.2.3 # Jun 26, 2022, 8:16:00 PM Mon, 27 Nov 2006 11:36:37 GMT Nicklas Nordborg [2959] * trunk/bin (added) * trunk/bin/dbinfo.bat (moved) * trunk/bin/dbinfo.sh (moved) * trunk/bin/dropindexes.bat (moved) * trunk/bin/dropindexes.sh (moved) * trunk/bin/initdb.bat (moved) * trunk/bin/initdb.sh (moved) * trunk/bin/jobagent.bat (moved) * trunk/bin/jobagent.sh (moved) * trunk/bin/migrate_from_1.2.sh (moved) * trunk/bin/set_classpath.bat (moved) * trunk/bin/set_classpath.sh (added) * trunk/bin/updatedb.bat (moved) * trunk/bin/updatedb.sh (moved) * trunk/bin/updateindexes.bat (moved) * trunk/bin/updateindexes.sh (moved) * trunk/build.xml (modified) * trunk/config (added) * trunk/config/dist (added) * trunk/config/dist/base.config (added) * trunk/config/dist/ehcache.xml (added) * trunk/config/dist/extended-properties.xml (added) * trunk/config/dist/hibernate.cfg.xml (added) * trunk/config/dist/jobagent.properties (added) * trunk/config/dist/log4j.properties (added) * trunk/config/dist/migrate.properties (added) * trunk/config/dist/mysql-migration-queries.sql (added) * trunk/config/dist/mysql-queries.xml (added) * trunk/config/dist/postgres-queries.xml (added) * trunk/config/dist/raw-data-types.xml (added) * trunk/config/dist/web.xml (added) * trunk/config/local (added) * trunk/config/local/readme.txt (added) * trunk/data (added) * trunk/data/helptexts.xml (moved) * trunk/data/plugin_configfile.xml (moved) * trunk/doc/admin/extended-properties.html (modified) * trunk/doc/development/build.html (added) * trunk/doc/development/index.html (modified) * trunk/doc/installation.html (modified) * trunk/lib/compile (deleted) * trunk/lib/dist/hibernate3.jar (copied) * trunk/lib/dist/jai_codec.jar (copied) * trunk/lib/dist/jai_core.jar (copied) * trunk/lib/dist/jcommon-1.0.0.jar (copied) * trunk/lib/dist/jdom.jar (copied) * trunk/lib/dist/jep-2.4.0.jar (copied) * trunk/lib/dist/jfreechart-1.0.1.jar (copied) * trunk/lib/dist/log4j-1.2.13.jar (copied) * trunk/lib/dist/mlibwrapper_jai.jar (copied) * trunk/lib/servlet (added) * trunk/lib/servlet/jsp-api.jar (added) * trunk/lib/servlet/servlet-api.jar (added) * trunk/src/base.config.in (deleted) * trunk/src/clients/jobagent/jobagent.properties.in (deleted) * trunk/src/clients/migrate/migrate.properties.in (deleted) * trunk/src/clients/migrate/sql (deleted) * trunk/src/ehcache.xml (deleted) * trunk/src/extended-properties.xml (deleted) * trunk/src/hibernate.cfg.xml (deleted) * trunk/src/install/includes (deleted) * trunk/src/log4j.properties.in (deleted) * trunk/src/mysql-queries.xml (deleted) * trunk/src/postgres-queries.xml (deleted) * trunk/src/raw-data-types.xml (deleted) * trunk/src/test/TestArrayDesign.java (modified) * trunk/src/test/TestExperiment.java (modified) * trunk/src/test/TestFile.java (modified) * trunk/src/test/TestFlatFileParser.java (modified) * trunk/src/test/TestPlateFlatFileImporter.java (modified) * trunk/src/test/TestPrintMapFlatFileImporter.java (modified) * trunk/src/test/TestQuota.java (modified) * trunk/src/test/TestRawBioAssay.java (modified) * trunk/src/test/TestRawDataFlatFileImporter.java (modified) * trunk/src/test/TestReporter.java (modified) * trunk/src/test/TestReporterFlatFileImporter.java (modified) * trunk/src/test/TestReporterList.java (modified) * trunk/src/test/TestReporterMapFlatFileImporter.java (modified) * trunk/src/test/TestSpotImages.java (modified) * trunk/src/test/TestXMLUtil.java (modified) * trunk/src/test/data (added) * trunk/src/test/data/JarPluginManifest.txt (moved) * trunk/src/test/data/extended-properties.dtd (moved) * trunk/src/test/data/extended-properties.xml (moved) * trunk/src/test/data/spots.tif (moved) * trunk/src/test/data/test.parse.genepix.result.gpr (moved) * trunk/src/test/data/test.parse.hskg.plates.txt (moved) * trunk/src/test/data/test.parse.printmap.mwbr (moved) * trunk/src/test/data/test.parse.printmap.tam (moved) * trunk/src/test/data/test.plate96.import.txt (moved) * trunk/src/test/data/test.plugin.base (moved) * trunk/src/test/data/test.rawdata.import.txt (moved) * trunk/src/test/data/test.reporter.import.txt (moved) * trunk/src/test/data/test.reportermap.import.txt (moved) * trunk/src/test/data/test.unpack.zip (moved) * trunk/src/test/data/test.upload.png (moved) * trunk/src/test/data/test.upload.txt (moved) * trunk/src/test/set_classpath.bat (modified) * trunk/src/test/set_classpath.sh (modified) * trunk/src/web.xml.in (deleted) References #412: Fix build.xml to make it more developer-friendly Thu, 31 Aug 2006 11:13:36 GMT Nicklas Nordborg [2614] * trunk/doc/specifications/migration/index.html (modified) * trunk/src/clients/migrate/migrate.properties.in (modified) * trunk/src/clients/migrate/migrate_from_1.2.sh (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/AnnotationTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/AnnotationTypeTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ArrayBatchTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ArrayBlockTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ArraySlideTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ArrayTypePlateTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ArrayTypeTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ExperimentTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ExtractTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/GroupTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/HardwareTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/HybridizationTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ImageFileTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/LabelTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/LabeledExtractTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/Manager.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/MappedPlateTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/MeasuredBioMaterialTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/Migrater.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/PlateEventTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/PlateEventTypeTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/PlateTypeTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ProtocolTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ProtocolTypeTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/RawBioAssayDataTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/RawBioAssayTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ReporterProxy.java (added) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ReporterTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/SampleTissueTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/SampleTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/ScanTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/SharedItemTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/SoftwareTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/Transfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/UnmappedPlateTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/UploadFileTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/UserTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/WellTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/WizzzardTransfer.java (modified) * trunk/src/clients/migrate/sql/mysql-migration-queries.sql (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/SimpleExport.java (modified) * trunk/src/log4j.properties.in (modified) References #332: Base 1 ID lookup is unstable Should fix the ...