# # ChangeLog for trunk/doc/src/javadoc/overview.html # # Generated by Trac 1.2.3 # Dec 4, 2022, 6:29:20 AM Wed, 11 Aug 2021 06:36:22 GMT Nicklas Nordborg [8001] * trunk/build.xml (modified) * trunk/doc/src/javadoc/javadoc.css (deleted) * trunk/doc/src/javadoc/overview.html (modified) Fix issues with javadoc generation when building with Java 15+ Mon, 14 Jun 2021 08:01:21 GMT Nicklas Nordborg [7982] * trunk (modified) * trunk/doc/historical/admin/extended-properties.html (modified) * trunk/doc/historical/admin/plugin_configuration/coreplugins.html (modified) * trunk/doc/historical/development/build.html (modified) * trunk/doc/historical/development/plugins/index.html (modified) * trunk/doc/historical/test/index.html (modified) * trunk/doc/historical/test/merge/index.html (modified) * trunk/doc/historical/user/getting_started.html (modified) * trunk/doc/src/docbook/admin/installation.xml (modified) * trunk/doc/src/docbook/appendix/base.config.xml (modified) * trunk/doc/src/docbook/appendix/coreplugins.xml (modified) * trunk/doc/src/docbook/appendix/incompatible.xml (modified) * trunk/doc/src/docbook/appendix/update_warnings.xml (modified) * trunk/doc/src/docbook/appendix/web.xml.xml (modified) * trunk/doc/src/docbook/developer/base_api.xml (modified) * trunk/doc/src/docbook/developer/core_ref.xml (modified) * trunk/doc/src/docbook/developer/documentation.xml (modified) * trunk/doc/src/docbook/developer/extensions.xml (modified) * trunk/doc/src/docbook/developer/migrate_2_3.xml (modified) * trunk/doc/src/docbook/developer/overview.xml (modified) * trunk/doc/src/docbook/developer/plugins.xml (modified) * trunk/doc/src/docbook/faq/faqs.xml (modified) * trunk/doc/src/docbook/figures/configure_columns.png (modified) * trunk/doc/src/docbook/overview/features.xml (modified) * trunk/doc/src/docbook/overview/resources.xml (modified) * trunk/doc/src/docbook/overview/why_base.xml (modified) * trunk/doc/src/docbook/user/file_system.xml (modified) * trunk/doc/src/docbook/user/webclient.xml (modified) * trunk/doc/src/javadoc/overview.html (modified) * trunk/doc/test/performance/index.html (modified) * trunk/doc/test/roles/index.html (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/Base.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/ExperimentExplorer.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Table.java (modified) * trunk/src/clients/web/web-extensions.xml (modified) * trunk/src/core/core-extensions.xml (modified) * trunk/src/core/net/sf/basedb/core/HibernateUtil.java (modified) * trunk/src/core/net/sf/basedb/core/ItemContext.java (modified) * trunk/src/core/net/sf/basedb/core/Message.java (modified) * trunk/src/core/net/sf/basedb/core/Session.java (modified) * trunk/src/core/net/sf/basedb/core/UserDevice.java (modified) * trunk/src/install/net/sf/basedb/install/Webclient.java (modified) * trunk/src/plugins/core/core-plugins.xml (modified) * trunk/src/test/TestFile.java (modified) * trunk/src/test/TestFileServer.java (modified) * trunk/www/admin/annotationtypecategories/list_categories.jsp (modified) * trunk/www/admin/annotationtypes/list_annotationtypes.jsp (modified) * trunk/www/admin/clients/help/list_help.jsp (modified) * trunk/www/admin/clients/list_clients.jsp (modified) * trunk/www/admin/datafiletypes/list_filetypes.jsp (modified) * trunk/www/admin/diskusage/list_groups.jsp (modified) * trunk/www/admin/diskusage/list_users.jsp (modified) * trunk/www/admin/extravaluetypes/list_extravaluetypes.jsp (modified) * trunk/www/admin/groups/list_groups.jsp (modified) * trunk/www/admin/hardware/list_hardware.jsp (modified) * trunk/www/admin/itemsubtypes/list_subtypes.jsp (modified) * trunk/www/admin/jobagents/list_agents.jsp (modified) * trunk/www/admin/mimetypes/list_mimetypes.jsp (modified) * trunk/www/admin/news/list_news.jsp (modified) * trunk/www/admin/platforms/list_platforms.jsp (modified) * trunk/www/admin/platforms/variants/list_variants.jsp (modified) * trunk/www/admin/pluginconfigurations/list_configurations.jsp (modified) * trunk/www/admin/plugindefinitions/list_plugins.jsp (modified) * trunk/www/admin/plugintypes/list_plugintypes.jsp (modified) * trunk/www/admin/protocols/list_protocol.jsp (modified) * trunk/www/admin/quantities/list_quantities.jsp (modified) * trunk/www/admin/quota/list_quota.jsp (modified) * trunk/www/admin/quotatypes/list_quotatypes.jsp (modified) * trunk/www/admin/reporterclonetemplates/list_templates.jsp (modified) * trunk/www/admin/reportertypes/list_reportertypes.jsp (modified) * trunk/www/admin/roles/list_roles.jsp (modified) * trunk/www/admin/software/list_software.jsp (modified) * trunk/www/admin/users/list_users.jsp (modified) * trunk/www/biomaterials/bioplateeventtypes/list_eventtypes.jsp (modified) * trunk/www/biomaterials/bioplates/events/index.jsp (modified) * trunk/www/biomaterials/bioplates/events/list_events.jsp (modified) * trunk/www/biomaterials/bioplates/list_bioplates.jsp (modified) * trunk/www/biomaterials/bioplates/wells/index.jsp (modified) * trunk/www/biomaterials/bioplates/wells/list_biowells.jsp (modified) * trunk/www/biomaterials/bioplatetypes/list_platetypes.jsp (modified) * trunk/www/biomaterials/biosources/list_biosources.jsp (modified) * trunk/www/biomaterials/events/index.jsp (modified) * trunk/www/biomaterials/events/list_events.jsp (modified) * trunk/www/biomaterials/extracts/list_extracts.jsp (modified) * trunk/www/biomaterials/kits/list_kits.jsp (modified) * trunk/www/biomaterials/samples/list_samples.jsp (modified) * trunk/www/biomaterials/tags/list_tags.jsp (modified) * trunk/www/common/columns/configure.js (modified) * trunk/www/common/columns/configure.jsp (modified) * trunk/www/common/columns/save_preset.js (modified) * trunk/www/common/columns/save_preset.jsp (modified) * trunk/www/common/columns/submit_preset.jsp (modified) * trunk/www/common/history/index.jsp (modified) * trunk/www/common/history/list_history.jsp (modified) * trunk/www/filemanager/files/list_files.jsp (modified) * trunk/www/filemanager/fileservers/list_fileservers.jsp (modified) * trunk/www/include/scripts/lazy-items.js (modified) * trunk/www/include/scripts/table.js (modified) * trunk/www/lims/arraybatches/list_batches.jsp (modified) * trunk/www/lims/arraydesigns/features/index.jsp (modified) * trunk/www/lims/arraydesigns/features/list_features.jsp (modified) * trunk/www/lims/arraydesigns/list_designs.jsp (modified) * trunk/www/lims/arrayslides/list_slides.jsp (modified) * trunk/www/lims/geometries/list_geometries.jsp (modified) * trunk/www/lims/platemappings/list_mappings.jsp (modified) * trunk/www/lims/plates/events/index.jsp (modified) * trunk/www/lims/plates/events/list_events.jsp (modified) * trunk/www/lims/plates/list_plates.jsp (modified) * trunk/www/lims/plates/wells/index.jsp (modified) * trunk/www/lims/plates/wells/list_wells.jsp (modified) * trunk/www/lims/platetypes/eventtypes/list_eventtypes.jsp (modified) * trunk/www/lims/platetypes/list_platetypes.jsp (modified) * trunk/www/my_base/messages/list_messages.jsp (modified) * trunk/www/my_base/projects/items/list_items.jsp (modified) * trunk/www/my_base/projects/list_projects.jsp (modified) * trunk/www/views/derivedbioassays/list_bioassays.jsp (modified) * trunk/www/views/devices/list_devices.jsp (modified) * trunk/www/views/experiments/bioassays/list_bioassays.jsp (modified) * trunk/www/views/experiments/bioassaysets/analysis_tree.jsp (modified) * trunk/www/views/experiments/explorer/search/list.jsp (modified) * trunk/www/views/experiments/list_experiments.jsp (modified) * trunk/www/views/experiments/reporters/index.jsp (modified) * trunk/www/views/experiments/reporters/list_reporters.jsp (modified) * trunk/www/views/experiments/spotdata/index.jsp (modified) * trunk/www/views/experiments/spotdata/list_spotdata.jsp (modified) * trunk/www/views/formulas/list_formulas.jsp (modified) * trunk/www/views/itemlists/list_lists.jsp (modified) * trunk/www/views/itemlists/members/list_members.jsp (modified) * trunk/www/views/items/list_items.jsp (modified) * trunk/www/views/jobs/list_jobs.jsp (modified) * trunk/www/views/permissiontemplates/list_templates.jsp (modified) * trunk/www/views/physicalbioassays/list_bioassays.jsp (modified) * trunk/www/views/rawbioassays/list_rawbioassays.jsp (modified) * trunk/www/views/rawbioassays/rawdata/list_rawdata.jsp (modified) * trunk/www/views/reporterlists/list_reporterlists.jsp (modified) * trunk/www/views/reporterlists/reporters/list_reporters.jsp (modified) * trunk/www/views/reporters/list_reporters.jsp (modified) * trunk/www/views/sessions/list_sessions.jsp (modified) * trunk/www/views/trashcan/list_trash.jsp (modified) Merge BASE 3.18.2 to the trunk Fri, 21 Oct 2011 11:15:41 GMT Nicklas Nordborg [5818] * trunk/build.xml (modified) * trunk/doc/src/docbook/developer/base_api.xml (modified) * trunk/doc/src/docbook/developer/webservices.xml (modified) * trunk/doc/src/docbook/figures/uml/corelayer.datainfiles.png (modified) * trunk/doc/src/docbook/figures/uml/corelayer.signals.png (modified) * trunk/doc/src/javadoc/overview.html (modified) * trunk/doc/src/uml/baseuml.mdzip (modified) * trunk/lib/docbook/custom-styles/docbook/plain/css/docbook.css (modified) * trunk/src/core/net/sf/basedb/core/BasicItem.java (modified) * trunk/src/core/net/sf/basedb/core/Batcher.java (modified) * trunk/src/core/net/sf/basedb/core/ContextKey.java (modified) * trunk/src/core/net/sf/basedb/core/DataCube.java (modified) * trunk/src/core/net/sf/basedb/core/QueryRuntimeFilter.java (modified) * trunk/src/core/net/sf/basedb/core/QueryRuntimeFilterFactory.java (modified) * trunk/src/core/net/sf/basedb/core/QueryRuntimeFilterManager.java (modified) * trunk/src/core/net/sf/basedb/core/Role.java (modified) * trunk/src/core/net/sf/basedb/core/data/AnnotatableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/AnnotatedData.java (modified) * trunk/src/core/net/sf/basedb/core/data/AnnotationData.java (modified) * trunk/src/core/net/sf/basedb/core/data/AnnotationSetData.java (modified) * trunk/src/core/net/sf/basedb/core/data/AnnotationTypeCategoryData.java (modified) * trunk/src/core/net/sf/basedb/core/data/AnnotationTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/AnyToAnyData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ArrayBatchData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ArrayDesignBlockData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ArrayDesignData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ArrayDesignPlateData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ArraySlideData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BasicData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BatchableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioAssayData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioAssaySetData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioMaterialData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioMaterialEventData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioMaterialEventSourceData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioMaterialListData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioPlateData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioPlateEventData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioPlateEventParticipantData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioPlateEventTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioPlateTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioSourceData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BioWellData.java (modified) * trunk/src/core/net/sf/basedb/core/data/BooleanParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ChangeHistoryData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ChangeHistoryDetailData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ClientData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ClientDefaultSettingData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ColoringData.java (modified) * trunk/src/core/net/sf/basedb/core/data/CommonData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ContextData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ContextIndex.java (modified) * trunk/src/core/net/sf/basedb/core/data/DataCubeColumnData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DataCubeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DataCubeExtraValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DataCubeFilterData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DataCubeLayerData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DataFileTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DateParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DerivedBioAssayData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DirectoryData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DiskConsumableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DiskUsageData.java (modified) * trunk/src/core/net/sf/basedb/core/data/DoubleParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ExperimentData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ExtendableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ExtraValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ExtraValueTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ExtractData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FeatureData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FileAttachableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FileData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FileServerData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FileSetData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FileSetMemberData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FileStoreEnabledData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FileTypeIndex.java (modified) * trunk/src/core/net/sf/basedb/core/data/FloatParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/FormulaData.java (modified) * trunk/src/core/net/sf/basedb/core/data/GlobalDefaultSettingData.java (modified) * trunk/src/core/net/sf/basedb/core/data/GroupData.java (modified) * trunk/src/core/net/sf/basedb/core/data/GuiContextData.java (modified) * trunk/src/core/net/sf/basedb/core/data/HardwareData.java (modified) * trunk/src/core/net/sf/basedb/core/data/HelpData.java (modified) * trunk/src/core/net/sf/basedb/core/data/IdentifiableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/IntegerParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ItemKeyData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ItemParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ItemSubtypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ItemSubtypeFileTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/JobAgentData.java (modified) * trunk/src/core/net/sf/basedb/core/data/JobAgentSettingsData.java (modified) * trunk/src/core/net/sf/basedb/core/data/JobData.java (modified) * trunk/src/core/net/sf/basedb/core/data/KeyData.java (modified) * trunk/src/core/net/sf/basedb/core/data/LoggableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/LongParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/MappingCoordinate.java (modified) * trunk/src/core/net/sf/basedb/core/data/MeasuredBioMaterialData.java (modified) * trunk/src/core/net/sf/basedb/core/data/MessageData.java (modified) * trunk/src/core/net/sf/basedb/core/data/MimeTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/NameableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/NewsData.java (modified) * trunk/src/core/net/sf/basedb/core/data/OwnableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/OwnedData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PasswordData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PermissionTemplateData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PhysicalBioAssayData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlateCoordinate.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlateData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlateEventData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlateEventTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlateGeometryData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlateMappingData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlateTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlatformData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlatformFileTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PlatformVariantData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PluginConfigurationData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PluginDefinitionData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PluginPermission.java (modified) * trunk/src/core/net/sf/basedb/core/data/PluginTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ProjectData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ProjectKeyData.java (modified) * trunk/src/core/net/sf/basedb/core/data/PropertyFilterData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ProtocolData.java (modified) * trunk/src/core/net/sf/basedb/core/data/QuantityData.java (modified) * trunk/src/core/net/sf/basedb/core/data/QuotaData.java (modified) * trunk/src/core/net/sf/basedb/core/data/QuotaIndex.java (modified) * trunk/src/core/net/sf/basedb/core/data/QuotaTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/RawBioAssayData.java (modified) * trunk/src/core/net/sf/basedb/core/data/RawData.java (modified) * trunk/src/core/net/sf/basedb/core/data/RegisteredData.java (modified) * trunk/src/core/net/sf/basedb/core/data/RemovableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ReporterData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ReporterListData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ReporterListScoreData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ReporterTypeData.java (modified) * trunk/src/core/net/sf/basedb/core/data/RoleData.java (modified) * trunk/src/core/net/sf/basedb/core/data/RoleKeyData.java (modified) * trunk/src/core/net/sf/basedb/core/data/SampleData.java (modified) * trunk/src/core/net/sf/basedb/core/data/SessionData.java (modified) * trunk/src/core/net/sf/basedb/core/data/SettingData.java (modified) * trunk/src/core/net/sf/basedb/core/data/ShareableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/SharedData.java (modified) * trunk/src/core/net/sf/basedb/core/data/SoftwareData.java (modified) * trunk/src/core/net/sf/basedb/core/data/SpotImagesData.java (modified) * trunk/src/core/net/sf/basedb/core/data/StringParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/SubtypableData.java (modified) * trunk/src/core/net/sf/basedb/core/data/SystemData.java (modified) * trunk/src/core/net/sf/basedb/core/data/TagData.java (modified) * trunk/src/core/net/sf/basedb/core/data/TextParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/TimestampParameterValueData.java (modified) * trunk/src/core/net/sf/basedb/core/data/TransformationData.java (modified) * trunk/src/core/net/sf/basedb/core/data/UnitData.java (modified) * trunk/src/core/net/sf/basedb/core/data/UnitSymbolData.java (modified) * trunk/src/core/net/sf/basedb/core/data/UserClientSettingData.java (modified) * trunk/src/core/net/sf/basedb/core/data/UserData.java (modified) * trunk/src/core/net/sf/basedb/core/data/UserDefaultSettingData.java (modified) * trunk/src/core/net/sf/basedb/core/data/VersionedParameter.java (modified) * trunk/src/core/net/sf/basedb/core/data/VirtualDbData.java (modified) * trunk/src/core/net/sf/basedb/core/data/WellData.java (modified) * trunk/src/core/net/sf/basedb/core/query/Query.java (modified) * trunk/src/core/net/sf/basedb/util/fileset/ValidationAction.java (modified) * trunk/src/core/net/sf/basedb/util/overview/GenericOverview.java (modified) * trunk/src/core/net/sf/basedb/util/overview/OverviewContext.java (modified) * trunk/src/core/net/sf/basedb/util/overview/loader/AbstractNodeLoader.java (modified) * trunk/src/core/net/sf/basedb/util/overview/loader/BasicItemNodeLoader.java (modified) * trunk/src/core/net/sf/basedb/util/overview/loader/NodeLoader.java (modified) * trunk/src/core/net/sf/basedb/util/overview/loader/NodeLoaderFactory.java (modified) * trunk/src/core/net/sf/basedb/util/overview/node/NodeFactory.java (modified) * trunk/src/core/net/sf/basedb/util/overview/node/NodeNameGenerator.java (modified) * trunk/src/core/net/sf/basedb/util/overview/validator/BasicNodeValidator.java (modified) * trunk/src/core/net/sf/basedb/util/overview/validator/NodeValidator.java (modified) * trunk/src/core/net/sf/basedb/util/overview/validator/NodeValidatorFactory.java (modified) * trunk/src/webservices/server/net/sf/basedb/ws/server/BioAssaySetService.java (modified) References #1590: Documentation cleanup Some more sections in the ... Thu, 05 Feb 2009 13:39:25 GMT Nicklas Nordborg [4740] * trunk/build.xml (modified) * trunk/config/dist/log4j.properties (modified) * trunk/doc/src/javadoc/overview.html (modified) * trunk/src/core/net/sf/basedb/core/Extract.java (modified) * trunk/src/core/net/sf/basedb/core/LabeledExtract.java (modified) * trunk/src/core/net/sf/basedb/core/Project.java (modified) * trunk/src/core/net/sf/basedb/core/Protocol.java (modified) * trunk/src/core/net/sf/basedb/core/Sample.java (modified) * trunk/src/core/net/sf/basedb/util/ClassUtil.java (modified) * trunk/src/core/net/sf/basedb/util/filter/EqualsFilter.java (added) * trunk/src/core/net/sf/basedb/util/filter/IdentityFilter.java (added) * trunk/src/core/net/sf/basedb/util/overview/ExperimentOverview.java (modified) * trunk/src/core/net/sf/basedb/util/overview/GenericOverview.java (added) * trunk/src/core/net/sf/basedb/util/overview/Node.java (modified) * trunk/src/core/net/sf/basedb/util/overview/OverviewContext.java (added) * trunk/src/core/net/sf/basedb/util/overview/OverviewUtil.java (added) * trunk/src/core/net/sf/basedb/util/overview/cache (added) * trunk/src/core/net/sf/basedb/util/overview/cache/IndexedCacheKey.java (added) * trunk/src/core/net/sf/basedb/util/overview/cache/NodeCache.java (added) * trunk/src/core/net/sf/basedb/util/overview/filter (added) * trunk/src/core/net/sf/basedb/util/overview/filter/BasicItemFilter.java (added) * trunk/src/core/net/sf/basedb/util/overview/filter/ItemTypeFilter.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader (added) * trunk/src/core/net/sf/basedb/util/overview/loader/AbstractNodeLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/AnnotationLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ArrayBatchLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ArrayDesignLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ArraySlideLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/AutoChildNodeLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/BasicItemNodeLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/BasicItemNodeLoaderFactory.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/BioSourceLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/DataFileLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ExperimentLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ExperimentalFactorLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ExtractLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/HardwareLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/HybridizationLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ImageLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/LabeledExtractLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/NodeLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/NodeLoaderFactory.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/NullNodeLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/PlatformLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ProtocolLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ProtocolParameterLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/RawBioAssayLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/SampleLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/ScanLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/loader/SoftwareLoader.java (added) * trunk/src/core/net/sf/basedb/util/overview/node (added) * trunk/src/core/net/sf/basedb/util/overview/node/AnnotationNameGenerator.java (added) * trunk/src/core/net/sf/basedb/util/overview/node/ChildNodeDirection.java (added) * trunk/src/core/net/sf/basedb/util/overview/node/FileSetMemberNameGenerator.java (added) * trunk/src/core/net/sf/basedb/util/overview/node/NameableNameGenerator.java (added) * trunk/src/core/net/sf/basedb/util/overview/node/NodeFactory.java (added) * trunk/src/core/net/sf/basedb/util/overview/node/NodeNameGenerator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator (added) * trunk/src/core/net/sf/basedb/util/overview/validator/AnnotationValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/ArrayBatchValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/ArrayDesignValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/ArraySlideValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/BasicItemNodeValidatorFactory.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/BasicNodeValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/BioSourceValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/DataFileValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/ExperimentValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/ExtractValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/HardwareValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/HybridizationValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/LabeledExtractValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/NodeValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/NodeValidatorFactory.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/NullNodeValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/PlatformValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/ProtocolParameterValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/ProtocolValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/RawBioAssayValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/SampleValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/ScanValidator.java (added) * trunk/src/core/net/sf/basedb/util/overview/validator/SoftwareValidator.java (added) * trunk/src/test/TestAll.java (modified) * trunk/src/test/TestAnalyzePluginUtil.java (modified) * trunk/src/test/TestAnnotation.java (modified) * trunk/src/test/TestDirty.java (modified) * trunk/src/test/TestExperiment.java (modified) * trunk/src/test/TestExtract.java (modified) * trunk/src/test/TestGenericOverview.java (added) * trunk/src/test/TestHybridization.java (modified) * trunk/src/test/TestLabel.java (modified) * trunk/src/test/TestLabeledExtract.java (modified) * trunk/src/test/TestProtocol.java (modified) * trunk/src/test/TestRawBioAssay.java (modified) * trunk/src/test/TestRawDataFlatFileImporter.java (modified) * trunk/src/test/TestSample.java (modified) * trunk/src/test/TestSpotImages.java (modified) * trunk/src/test/TestWebservices.java (modified) * trunk/src/test/net/sf/basedb/test/roles/AnalysisTest.java (modified) Refernces #1193: Generic tree-like item overview Initial checkin of ... Thu, 11 Sep 2008 20:01:44 GMT Jari Häkkinen [4509] * trunk/data/plugin_configfile.xml (modified) * trunk/doc/3rd-party-components.txt (modified) * trunk/doc/historical/admin/base.config.html (modified) * trunk/doc/historical/admin/extended-properties.html (modified) * trunk/doc/historical/admin/index.html (modified) * trunk/doc/historical/admin/plugin_configuration/coreplugins.html (modified) * trunk/doc/historical/admin/plugin_configuration/import/plate_importer_384wells.xml (modified) * trunk/doc/historical/admin/plugin_configuration/import/plate_importer_96wells.xml (modified) * trunk/doc/historical/admin/plugin_configuration/import/raw_data_importer_genepix-cy3_cy5.xml (modified) * trunk/doc/historical/admin/plugin_configuration/import/raw_data_importer_genepix-cy5_cy3.xml (modified) * trunk/doc/historical/admin/plugin_configuration/import/reporter_importer_384wells.xml (modified) * trunk/doc/historical/admin/plugin_configuration/import/reporter_importer_96wells.xml (modified) * 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Missed to change reference wherefrom retrive GPLv3 ... 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* trunk/doc/src/docbook/userdoc/platforms.xml (modified) * trunk/doc/src/docbook/userdoc/project_permission.xml (modified) * trunk/doc/src/docbook/userdoc/protocols.xml (modified) * trunk/doc/src/docbook/userdoc/rawbioassays.xml (modified) * trunk/doc/src/docbook/userdoc/reporters.xml (modified) * trunk/doc/src/docbook/userdoc/scans_images.xml (modified) * trunk/doc/src/docbook/userdoc/software.xml (modified) * trunk/doc/src/docbook/userdoc/webclient.xml (modified) * trunk/doc/src/javadoc/javadoc.css (modified) * trunk/doc/src/javadoc/overview.html (modified) * trunk/doc/test/performance/index.html (modified) * trunk/doc/test/roles/index.html (modified) Addresses #1106. Moving to GPLv3 in chunked commits. 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(modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/UnmappedPlateTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/UploadFileTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/UserTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/WellTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/WizzzardTransfer.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/WrappedDataItem.java (modified) * trunk/src/clients/migrate/net/sf/basedb/clients/migrate/WrappedItem.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/Base.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/DuplicateWizardException.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/DynamicUtil.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/ExperimentExplorer.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/ModeInfo.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/PermissionUtil.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/WebException.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/dtd/export.dtd (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/dtd/tableinfo.dtd (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/fileupload/FileUpload.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/fileupload/FileUploadProgress.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/fileupload/UploadAbortedException.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/fileupload/UploadedFile.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/fileupload/package.html (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/formatter/ColorFormatter.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/formatter/ExtendedPropertyFormatter.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/formatter/FormatterFactory.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/formatter/FormatterSettings.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/formatter/SpotImageFormatter.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/formatter/StringFormatter.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/DataQueryWrapper.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/DynamicQueryWrapper.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/ExportTemplate.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/ExportedProperty.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/ItemQueryWrapper.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/PlainTextTemplate.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/QueryWrapper.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/ReporterScoreQueryWrapper.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/SimpleExport.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/plugins/XMLTemplate.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/servlet/CharacterEncodingFilter.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/servlet/CompileAll.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/servlet/Download.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/servlet/MevExport.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/servlet/PlotServlet.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/servlet/ViewSpotImage.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/Body.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/Button.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/ButtonGroup.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/Head.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/Help.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/HideableSection.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/Icon.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/Note.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/Page.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/PropertyValue.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/Select.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/menu/Menu.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/menu/Menuitem.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/menu/Menuseparator.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/menu/Submenu.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/menu/package.html (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/path/Path.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/path/PathElement.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/tab/Tab.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/tab/TabControl.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/tab/package.html (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/tab/tab.css (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/tab/tab.js (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/tab/tab.tld (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Button.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Cell.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/CellValue.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/ColumnDef.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Columns.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Data.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Header.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Hidden.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Label.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Navigator.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Panel.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/PresetSelector.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/PropertyFilter.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Row.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Rows.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Table.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/TableColumn.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/Toolbar.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/taglib/table/package.html (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/util/HTML.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/util/NameablePluginAdaptor.java (modified) * trunk/src/clients/web/net/sf/basedb/clients/web/util/ServletExportOutputStream.java (modified) * trunk/src/core/common-queries.xml (modified) * trunk/src/core/net/sf/basedb/core/AbsoluteProgressReporter.java (modified) * trunk/src/core/net/sf/basedb/core/AbstractBatcher.java (modified) * trunk/src/core/net/sf/basedb/core/AbstractEntityQuery.java (modified) * trunk/src/core/net/sf/basedb/core/AbstractQuery.java (modified) * trunk/src/core/net/sf/basedb/core/AbstractResultList.java (modified) * trunk/src/core/net/sf/basedb/core/AbstractSqlQuery.java (modified) * trunk/src/core/net/sf/basedb/core/AccessControlled.java (modified) * trunk/src/core/net/sf/basedb/core/AccountExpiredException.java (modified) * trunk/src/core/net/sf/basedb/core/Affymetrix.java (modified) * trunk/src/core/net/sf/basedb/core/AlreadyLoggedInException.java (modified) * trunk/src/core/net/sf/basedb/core/Annotatable.java (modified) * trunk/src/core/net/sf/basedb/core/AnnotatedItem.java (modified) * 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trunk/src/core/net/sf/basedb/core/ArraySlide.java (modified) * trunk/src/core/net/sf/basedb/core/BaseException.java (modified) * trunk/src/core/net/sf/basedb/core/BasicBatcher.java (modified) * trunk/src/core/net/sf/basedb/core/BasicItem.java (modified) * trunk/src/core/net/sf/basedb/core/BatchUtil.java (modified) * trunk/src/core/net/sf/basedb/core/BatchedPropertyInfo.java (modified) * trunk/src/core/net/sf/basedb/core/Batcher.java (modified) * trunk/src/core/net/sf/basedb/core/BioAssay.java (modified) * trunk/src/core/net/sf/basedb/core/BioAssaySet.java (modified) * trunk/src/core/net/sf/basedb/core/BioMaterial.java (modified) * trunk/src/core/net/sf/basedb/core/BioMaterialEvent.java (modified) * trunk/src/core/net/sf/basedb/core/BioSource.java (modified) * trunk/src/core/net/sf/basedb/core/BlockInfo.java (modified) * trunk/src/core/net/sf/basedb/core/BooleanParameterType.java (modified) * trunk/src/core/net/sf/basedb/core/ChildItem.java (modified) * trunk/src/core/net/sf/basedb/core/Client.java (modified) * trunk/src/core/net/sf/basedb/core/ClientDefaultSetting.java (modified) * trunk/src/core/net/sf/basedb/core/Coloring.java (modified) * trunk/src/core/net/sf/basedb/core/CommonItem.java (modified) * trunk/src/core/net/sf/basedb/core/Config.java (modified) * trunk/src/core/net/sf/basedb/core/ConfigurationException.java (modified) * trunk/src/core/net/sf/basedb/core/ConnectionClosedException.java (modified) * trunk/src/core/net/sf/basedb/core/ContextKey.java (modified) * trunk/src/core/net/sf/basedb/core/Controlled.java (modified) * trunk/src/core/net/sf/basedb/core/DataCube.java (modified) * trunk/src/core/net/sf/basedb/core/DataCubeColumn.java (modified) * trunk/src/core/net/sf/basedb/core/DataCubeExtraValue.java (modified) * trunk/src/core/net/sf/basedb/core/DataCubeFilter.java (modified) * trunk/src/core/net/sf/basedb/core/DataCubeLayer.java (modified) * trunk/src/core/net/sf/basedb/core/DataQuery.java (modified) * trunk/src/core/net/sf/basedb/core/DataResultIterator.java (modified) * trunk/src/core/net/sf/basedb/core/DatabaseException.java (modified) * trunk/src/core/net/sf/basedb/core/DateParameterType.java (modified) * trunk/src/core/net/sf/basedb/core/DateUtil.java (modified) * trunk/src/core/net/sf/basedb/core/DbControl.java (modified) * trunk/src/core/net/sf/basedb/core/DetachedItemException.java (modified) * trunk/src/core/net/sf/basedb/core/Directory.java (modified) * trunk/src/core/net/sf/basedb/core/DisallowedValueException.java (modified) * trunk/src/core/net/sf/basedb/core/DiskConsumable.java (modified) * trunk/src/core/net/sf/basedb/core/DiskUsage.java (modified) * trunk/src/core/net/sf/basedb/core/DiskUsageStatistics.java (modified) * trunk/src/core/net/sf/basedb/core/DoubleParameterType.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicExtraValueQuery.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicJoin.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicPositionQuery.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicQuery.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicRawDataQuery.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicReporterQuery.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicRestriction.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicResultIterator.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicSpotQuery.java (modified) * trunk/src/core/net/sf/basedb/core/DynamicSpotQueryJoiners.java (modified) * trunk/src/core/net/sf/basedb/core/Experiment.java (modified) * trunk/src/core/net/sf/basedb/core/ExtendedProperties.java (modified) * trunk/src/core/net/sf/basedb/core/ExtendedProperty.java (modified) * trunk/src/core/net/sf/basedb/core/ExtendedPropertyAccessor.java (modified) * trunk/src/core/net/sf/basedb/core/ExtendedPropertyLinker.java (modified) * trunk/src/core/net/sf/basedb/core/ExtraValue.java (modified) * trunk/src/core/net/sf/basedb/core/ExtraValueExpression.java (modified) * trunk/src/core/net/sf/basedb/core/ExtraValueJoin.java (modified) * trunk/src/core/net/sf/basedb/core/ExtraValueType.java (modified) * trunk/src/core/net/sf/basedb/core/Extract.java (modified) * trunk/src/core/net/sf/basedb/core/Feature.java (modified) * trunk/src/core/net/sf/basedb/core/FeatureBatcher.java (modified) * trunk/src/core/net/sf/basedb/core/FeatureCoordinate.java (modified) * trunk/src/core/net/sf/basedb/core/File.java (modified) * trunk/src/core/net/sf/basedb/core/FileAttachable.java (modified) * trunk/src/core/net/sf/basedb/core/FileParameterType.java (modified) * trunk/src/core/net/sf/basedb/core/FileType.java (modified) * trunk/src/core/net/sf/basedb/core/FilterBatcher.java (modified) * trunk/src/core/net/sf/basedb/core/FloatParameterType.java (modified) * trunk/src/core/net/sf/basedb/core/Formula.java (modified) * trunk/src/core/net/sf/basedb/core/GlobalDefaultSetting.java (modified) * 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trunk/www/views/reporters/view_reporter.jsp (modified) * trunk/www/views/scans/edit_scan.jsp (modified) * trunk/www/views/scans/images/edit_image.jsp (modified) * trunk/www/views/scans/images/index.jsp (modified) * trunk/www/views/scans/images/list_images.jsp (modified) * trunk/www/views/scans/images/view_image.jsp (modified) * trunk/www/views/scans/index.jsp (modified) * trunk/www/views/scans/list_scans.jsp (modified) * trunk/www/views/scans/view_scan.jsp (modified) * trunk/www/views/sessions/index.jsp (modified) * trunk/www/views/sessions/list_sessions.jsp (modified) * trunk/www/views/sessions/view_session.jsp (modified) * trunk/www/views/trashcan/index.jsp (modified) * trunk/www/views/trashcan/list_trash.jsp (modified) * trunk/www/views/trashcan/view_item.jsp (modified) Fixing copyright statements. Fixing svn properties. Thu, 31 May 2007 07:33:52 GMT Nicklas Nordborg [3415] * trunk/doc/src/docbook/appendix/incompatible.xml (added) * trunk/doc/src/docbook/appendix/index.xml (modified) * trunk/doc/src/docbook/developerdoc/api_overview.xml (modified) * trunk/doc/src/docbook/developerdoc/core_ref.xml (modified) * trunk/doc/src/javadoc/overview.html (modified) * trunk/lib/docbook/custom-styles/docbook/plain/css/docbook.css (modified) References #552, #553, #554: More information about backwards ... Wed, 30 May 2007 13:35:40 GMT Nicklas Nordborg [3409] * trunk/build.xml (modified) * trunk/doc/src/docbook/developerdoc/api_overview.xml (modified) * trunk/doc/src/docbook/developerdoc/core_ref.xml (modified) * trunk/doc/src/docbook/developerdoc/javadoc.xml (modified) * trunk/doc/src/javadoc (added) * trunk/doc/src/javadoc/javadoc.css (moved) * trunk/doc/src/javadoc/overview.html (added) * trunk/lib/docbook/custom-styles/docbook/plain/css/docbook.css (modified) * trunk/src/core/net/sf/basedb/core/Permission.java (modified) * trunk/src/core/net/sf/basedb/core/PluginDefinition.java (modified) * trunk/src/core/net/sf/basedb/core/data/package.html (modified) * trunk/src/core/net/sf/basedb/core/query/EntityQuery.java (modified) * trunk/src/core/net/sf/basedb/core/query/HqlQuery.java (modified) References #552, #553, #554: Added information about backwards ...