source: trunk/doc

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Diff Rev Age Author Log Message
(edit) @2633   16 years Jari Häkkinen Added link to http://base.thep.lu.se
(edit) @2627   16 years Nicklas Nordborg References #351: External job server usage Added data layer class, …
(edit) @2626   16 years Martin Svensson Updated UML-diagram with entity value for plugin permissions.
(edit) @2625   16 years Nicklas Nordborg Added JobAgent? to UML diagram
(edit) @2624   16 years Martin Svensson Updated the documentation with information about plugin permissions.
(edit) @2623   16 years Nicklas Nordborg Removed links to the very old development status pages. Fixed redirect …
(edit) @2621   16 years Johan Enell Merge file added
(edit) @2615   16 years Nicklas Nordborg Added info about debug parameter for the migration.
(edit) @2614   16 years Nicklas Nordborg References #332: Base 1 ID lookup is unstable Should fix the original …
(edit) @2608   16 years Jari Häkkinen Added information about the broken migration tool.
(edit) @2605   16 years Nicklas Nordborg Changed text about Type.ITEM to not talk about lists any more.
(edit) @2594   16 years Martin Svensson Correct column names in plot types table, chapter 6, §7
(edit) @2593   16 years Martin Svensson Added a missing configuration value for the Raw data importer in the …
(edit) @2583   16 years Nicklas Nordborg Updated documentation about where to find test data
(edit) @2568   16 years Nicklas Nordborg Fixes #221: Create enhanced test procedure. References #222: Automated …
(edit) @2529   16 years Nicklas Nordborg Fixes #131: Write documentation 4a) Schematic overview of BASE
(edit) @2525   16 years Nicklas Nordborg References #131: Write documentation 3a) Schematic overview of BASE …
(edit) @2520   16 years Nicklas Nordborg Updated documentation that contained errors or wasn't up to date with …
(edit) @2516   16 years Nicklas Nordborg References #170: Categorize annotation types Updated UML diagram
(edit) @2512   16 years Nicklas Nordborg Fixes #302: Running a plugin without a configuration should not be possible
(edit) @2506   16 years Nicklas Nordborg References #170: Categorize annotation types Updated UML diagram
(edit) @2498   16 years Nicklas Nordborg Fixes #314: Update documentation that shows code examples with …
(edit) @2489   16 years Jari Häkkinen Added PostgreSQL setup information.
(edit) @2477   16 years Martin Svensson Created an association between BiomaterialEventData?-HardwareData? and …
(edit) @2474   16 years Nicklas Nordborg Fixes #263: Update to latest versions of 3rd-party software * Log4j: …
(edit) @2470   16 years Jari Häkkinen Fixed spelling for 'successfully'.
(edit) @2467   16 years Jari Häkkinen Fixed spelling errors.
(edit) @2463   16 years Jari Häkkinen Fixed minor errors.
(edit) @2447   16 years Jari Häkkinen Removed claim that BASE 2 is tested with mysql 4.1.
(edit) @2398   16 years Jari Häkkinen Ticket feedback procedure changed --> changes to some files.
(edit) @2383   16 years Jari Häkkinen Added some clarifying words about upgrades.
(edit) @2382   16 years Nicklas Nordborg Fixes #107 and #267: Any-to-any relation and Linking of files to items
(edit) @2354   16 years Martin Svensson Fixes #157 Display and link to associated items from list page
(edit) @2352   16 years Nicklas Nordborg First version of specification for Any-to-any. References #107.
(edit) @2351   16 years Jari Häkkinen Reverting link change.
(edit) @2349   16 years Jari Häkkinen Updated link to example plug-ins.
(edit) @2348   16 years Nicklas Nordborg Fixes #177: Store title and description of plugin parameters, not just …
(edit) @2344   16 years Nicklas Nordborg Updated UML doc for changes in ticket #206.
(edit) @2342   16 years Jari Häkkinen Compilation of Affymetrix discussions.
(edit) @2335   16 years Jari Häkkinen News: RC2 released.
(edit) @2328   16 years Jari Häkkinen Bumped RC1 to RC2. Fixed minor issues.
(edit) @2323   16 years Jari Häkkinen Added news item about the new BASE web site. Removed obsolete …
(edit) @2316   16 years Jari Häkkinen Moved download information to the Trac wiki.
(edit) @2315   16 years Nicklas Nordborg Now contains correct jar file information and version numbers
(edit) @2314   16 years Nicklas Nordborg Fixes #260: Remove AffyFeatures? table Also removed a lot of unused …
(edit) @2305   16 years Jari Häkkinen Removed stray CRLF characters, added missing svn properties.
(edit) @2304   16 years Jari Häkkinen Changed copyright statement.
(edit) @2300   16 years Jari Häkkinen Upgraded demo server to revision 2299.
(edit) @2287   16 years Jari Häkkinen Clarified information on BASE 1.2 database schema version when migrating.
(edit) @2286   16 years Nicklas Nordborg Updated the "roles" test suite to follow the latest specifications.
(edit) @2275   16 years Nicklas Nordborg Added instructions for the analysis tests.
(edit) @2258   16 years Nicklas Nordborg Updated test documentation
(edit) @2249   16 years Nicklas Nordborg Added first version of automated tests for roles. References #221 and #222.
(edit) @2245   16 years Nicklas Nordborg Changed annotation type to biosource for one of the annotations
(edit) @2244   16 years Martin Svensson Updated test procedure for USER
(edit) @2236   16 years Nicklas Nordborg Updated test procedures
(edit) @2235   16 years Martin Svensson Added test procedure for user
(edit) @2234   16 years Nicklas Nordborg Updated test procedure for power user
(edit) @2232   16 years Nicklas Nordborg Added some test instructions for root, admin and power user
(edit) @2230   16 years Martin Svensson Added documents to use when to write permissions test procedures
(edit) @2221   16 years Jari Häkkinen Updated demo server to revision 2220.
(edit) @2215   16 years Jari Häkkinen Upgraded demo server. Added info about updated database/index.
(edit) @2202   16 years Jari Häkkinen Removed schema change flag for RC1.2200.
(edit) @2201   16 years Jari Häkkinen Updated demo server.
(edit) @2200   16 years Jari Häkkinen Fixed spelling errors.
(edit) @2195   16 years Nicklas Nordborg Fixes #186 and #152 * The InteractivePlugin?.isInContext should return …
(edit) @2192   16 years Nicklas Nordborg Fixes #135: Write documentation: 3c) Internals of the core API - …
(edit) @2183   16 years Nicklas Nordborg First version of filtering a bioassayset.
(edit) @2181   16 years Jari Häkkinen Demo server updated.
(edit) @2180   16 years Jari Häkkinen Fixed cross references within doc and added info regarding MySQL 5.0
(edit) @2171   16 years Nicklas Nordborg Fixes #43: New icons in web interface
(edit) @2164   16 years Nicklas Nordborg Fixes #171: Experimental factor for experiments
(edit) @2156   16 years Nicklas Nordborg Removed TODO from item that was done.
(edit) @2155   16 years Nicklas Nordborg Fixes #139: Write documentation: 5d) Analysis plug-ins Added another …
(edit) @2154   16 years Nicklas Nordborg Fixes #137: Write documentation 5b) Plug-ins for importing data Added …
(edit) @2151   16 years Nicklas Nordborg Added documentation 6a) How to write plug-ins
(edit) @2146   16 years Jari Häkkinen Added devevloper information regarding database schema changes.
(edit) @2145   16 years Jari Häkkinen Added a column in the download section indicating schema change.
(edit) @2144   16 years Jari Häkkinen Added a comment about postgresql update problems.
(edit) @2143   16 years Jari Häkkinen Added new revision to download 2.0RC1.2142
(edit) @2141   17 years Jari Häkkinen Added downloads for all demo server versions including original RC1.
(edit) @2135   17 years Jari Häkkinen Updated authors.
(edit) @2110   17 years Jari Häkkinen Forgot information about database upgrade.
(edit) @2109   17 years Jari Häkkinen Improved docs, and added information on how to upgrade existing BASE 2.
(edit) @2104   17 years Nicklas Nordborg Added Formula, test code and updated UML diagram.
(edit) @2090   17 years Jari Häkkinen New package download revision.
(edit) @2081   17 years Jari Häkkinen Added a more visible link to milestones.
(edit) @2079   17 years Jari Häkkinen Fixes #130. The tomcat fix is not needed anymore, updated documentation.
(edit) @2076   17 years Martin Svensson Started to add some procedures to test permissions in BASE2
(edit) @2071   17 years Martin Svensson Testprocedures for projectadmin and updated newcommands
(edit) @2070   17 years Martin Svensson Updated the text and corrected misspellings
(edit) @2069   17 years Jari Häkkinen Updated information on downloadable RC1 version.
(edit) @2066   17 years Jari Häkkinen Checked in information explaining that downloadable RC1 is not the …
(edit) @2064   17 years Jari Häkkinen Fixed spelling error.
(edit) @2060   17 years Jari Häkkinen Bumped to RC1.
(edit) @2056   17 years Martin Svensson Correct some misspellings
(edit) @2055   17 years Jari Häkkinen Added subversion properties to .html files.
(edit) @2054   17 years Jari Häkkinen Added svn:ignore to exclude api direcotry.
(edit) @2053   17 years Jari Häkkinen Added subversion properties to .xml files.
(edit) @2051   17 years Martin Svensson Adapted and updated documents to the new listpages
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