source: trunk/src/clients/migrate/net

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Diff Rev Age Author Log Message
(edit) @3115   15 years Jari Häkkinen Added text on how to stop unintentional migration.
(edit) @2992   16 years Johan Enell Merged log:branches/2.1#2846:2990 trunk.
(edit) @2981   16 years Nicklas Nordborg Fixes #447: Fix javadoc warnings
(edit) @2870   16 years Martin Svensson References #397 Method may fail to close database resource
(edit) @2866   16 years Martin Svensson References #397 Null pointer dereference
(edit) @2863   16 years Martin Svensson Fixed bug: Nullcheck of value previously dereferenced
(edit) @2707   16 years Jari Häkkinen Spell checked.
(edit) @2697   16 years Nicklas Nordborg References #368: Migration should migrate plugin settings for BASE 1 …
(edit) @2693   16 years Nicklas Nordborg Fixes #368: Migration should migrate plugin settings for BASE 1 plugins
(edit) @2690   16 years Johan Enell Merged log:branches/2.0#2618:2688 from branch 2.0 to trunk.
(edit) @2614   16 years Nicklas Nordborg References #332: Base 1 ID lookup is unstable Should fix the original …
(edit) @2581   16 years Nicklas Nordborg Replaced fixed array with map. Use printStackTrace() method to always …
(edit) @2564   16 years Nicklas Nordborg Added Application.start(boolean) method that allows an application to …
(edit) @2395   16 years Nicklas Nordborg Fixed compilation error
(edit) @2318   16 years Nicklas Nordborg Set row and column coordinate of a feature
(edit) @2314   16 years Nicklas Nordborg Fixes #260: Remove AffyFeatures? table Also removed a lot of unused …
(edit) @2304   16 years Jari Häkkinen Changed copyright statement.
(edit) @2302   16 years Nicklas Nordborg Fixed Javadoc warnings
(edit) @2203   16 years Nicklas Nordborg Fixes #1: column names in flatfile parser Also changed migration so it …
(edit) @2169   16 years Nicklas Nordborg Fixes #148: Should read permission in BASE 1 be migrated as read/use …
(edit) @2027   16 years Gregory Vincic Fixed column order in the configuration view
(edit) @2023   16 years Gregory Vincic Fixed ticket #75 removing warnings and unused code
(edit) @2000   16 years Gregory Vincic Fixed ticket #77 and started working on removing unused code (ticket …
(edit) @1982   16 years Gregory Vincic Fixing migration bug where users where mapped incorrectly
(edit) @1979   16 years Nicklas Nordborg Fixed ticket #100: IllegalArgumentException? occurred calling getter of …
(edit) @1967   16 years Gregory Vincic Organizing imports
(edit) @1958   16 years Gregory Vincic Fixed ticket #63
(edit) @1916   16 years Gregory Vincic Removing unused imports
(edit) @1900   16 years Gregory Vincic Fixing javadoc warnings
(edit) @1797   16 years Gregory Vincic Fixed bug where roles where not assigned due to a closed DbControl?
(edit) @1774   16 years Gregory Vincic Cleaned up superfluous import statements and unused variables.
(edit) @1745   17 years Gregory Vincic Cleaned up comments
(edit) @1734   17 years Jari Häkkinen Fixed many warnings from javadoc. Added TODO comments all over with …
(edit) @1712   17 years Gregory Vincic Experiments whoose rawBioAssay does not have any rawData connected to …
(edit) @1711   17 years Gregory Vincic Removing log statement from prepareSTatementFromFile procedure
(edit) @1710   17 years Gregory Vincic Fixed bug where mean is lower than zero
(edit) @1707   17 years Gregory Vincic Fixed conflicts in RawBioAssayDataTransfer?
(edit) @1706   17 years Gregory Vincic Added ArrayDesign? check in RawBioAssayDataTransfer?
(edit) @1704   17 years Gregory Vincic Added ArrayDesign? check in RawBioAssayDataTransfer?
(edit) @1698   17 years Nicklas Nordborg Fixed compilation error
(edit) @1694   17 years Gregory Vincic Clean up
(edit) @1693   17 years Gregory Vincic Preparing statements at startup. Users and Groups now store their …
(edit) @1691   17 years Gregory Vincic Closing ResultSets? in Transfer. Fixing invalid date exception in …
(edit) @1689   17 years Gregory Vincic Catching SQLExceptions for invalid dates
(edit) @1687   17 years Gregory Vincic Fixed date parsing for expiration date
(edit) @1686   17 years Gregory Vincic Fixed date parsing for expiration date
(edit) @1685   17 years Gregory Vincic Fixed missing description for RawBioAssays?. Renamed selectRawBioAssay …
(edit) @1683   17 years Gregory Vincic Major rewrite. All SQL statements are now defined in a seperate file. …
(edit) @1679   17 years Nicklas Nordborg Added some raw data types and hardware / software in install
(edit) @1668   17 years Gregory Vincic Changed time calculation, which should eliminate the negative numbering.
(edit) @1665   17 years Gregory Vincic Removed some logging
(edit) @1661   17 years Nicklas Nordborg Added support for password encryption when loggin in
(edit) @1651   17 years Gregory Vincic Removed some logging
(edit) @1648   17 years Gregory Vincic Fixed bug with unavailable ArraySlides? and removed some logging
(edit) @1645   17 years Gregory Vincic Setting different SELECT limit if QUICK_TRANSFER = yes
(edit) @1644   17 years Gregory Vincic Removed calls to depraceted methods and fixed invalid use of null in …
(edit) @1643   17 years Gregory Vincic Catching NumberFormatException?
(edit) @1642   17 years Gregory Vincic Removed some logging
(edit) @1641   17 years Gregory Vincic Annotations generating InvalidDataException? are not migrated
(edit) @1637   17 years Gregory Vincic Fixed bug with equal filenames and removed some logging
(edit) @1633   17 years Gregory Vincic Logs migration ending
(edit) @1631   17 years Nicklas Nordborg Modified SessionControl?.impersonateLogin() to create a new …
(edit) @1630   17 years Gregory Vincic Fixed logging
(edit) @1625   17 years Gregory Vincic Changed error output to info
(edit) @1624   17 years Nicklas Nordborg Added Log4j logger to migration since it didn't compile now that the …
(edit) @1580   17 years Gregory Vincic Added ExperimentTransfer?
(edit) @1572   17 years Gregory Vincic Documenting
(edit) @1571   17 years Gregory Vincic Added migration of reportermap
(edit) @1570   17 years Gregory Vincic Initial revision of WizzzardTransfer?
(edit) @1569   17 years Gregory Vincic Fixed quota using new byteQuota in base schemaVersion 1.2.20
(edit) @1563   17 years Gregory Vincic Removing feature to delete files if transfer successful
(edit) @1561   17 years Gregory Vincic Added schema version control and uncommented plugin related roles. …
(edit) @1553   17 years Gregory Vincic Documenting and refactoring some DbControl? variables
(edit) @1551   17 years Gregory Vincic Fixed ArrayBlock? transfer which now saves Features properly. …
(edit) @1548   17 years Gregory Vincic Initial revision of ArrayBlockTransfer?. Added includeArrayBlock = yes …
(edit) @1547   17 years Gregory Vincic Added experimental localMySQL transfer and a seperated …
(edit) @1546   17 years Gregory Vincic Initial revision of ArrayTypePlateTransfer?
(edit) @1543   17 years Gregory Vincic Initial revision of ArrayType?
(edit) @1532   17 years Gregory Vincic Quick transfer is now configurable for testing purposes. Added some …
(edit) @1526   17 years Gregory Vincic Seperation of RawBioAssay? and it's data into two classes. Also added …
(edit) @1517   17 years Gregory Vincic Using the new image file transfer in UploadFileTransfer?
(edit) @1516   17 years Gregory Vincic saveItem now expects the item to already be saved to the database
(edit) @1515   17 years Gregory Vincic Adding Image file transfer
(edit) @1514   17 years Gregory Vincic Adding done() statement
(edit) @1513   17 years Gregory Vincic Adding done() statements
(edit) @1512   17 years Gregory Vincic Adding getDuration() method
(edit) @1511   17 years Gregory Vincic Added missing dependency control for protocolTransfer
(edit) @1510   17 years Gregory Vincic Using recursive run(PreparedStatement?,int,int)
(edit) @1509   17 years Gregory Vincic getReporterById handles exceptions
(edit) @1508   17 years Gregory Vincic itemList is initiated within run(PreparedStatement? ps, int from, int …
(edit) @1507   17 years Gregory Vincic Adding done() statements
(edit) @1506   17 years Gregory Vincic Adding comments and recoding MappedPlateTransfer?.
(edit) @1505   17 years Gregory Vincic createItem now returns the created Extract instead of null
(edit) @1498   17 years Gregory Vincic Documenting
(edit) @1497   17 years Gregory Vincic Added prepareStatement() method
(edit) @1496   17 years Gregory Vincic Small fixes here and there
(edit) @1495   17 years Gregory Vincic Using itemList to save items
(edit) @1494   17 years Gregory Vincic Added done() statement
(edit) @1493   17 years Gregory Vincic Removed debug log
(edit) @1492   17 years Gregory Vincic Initial revision
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