|
|
@3115
|
17 years |
Jari Häkkinen |
Added text on how to stop unintentional migration.
|
|
|
@2992
|
17 years |
Johan Enell |
Merged log:branches/2.1#2846:2990 trunk.
|
|
|
@2981
|
17 years |
Nicklas Nordborg |
Fixes #447: Fix javadoc warnings
|
|
|
@2959
|
17 years |
Nicklas Nordborg |
References #412: Fix build.xml to make it more developer-friendly
|
|
|
@2870
|
17 years |
Martin Svensson |
References #397 Method may fail to close database resource
|
|
|
@2866
|
17 years |
Martin Svensson |
References #397 Null pointer dereference
|
|
|
@2863
|
17 years |
Martin Svensson |
Fixed bug: Nullcheck of value previously dereferenced
|
|
|
@2707
|
17 years |
Jari Häkkinen |
Spell checked.
|
|
|
@2697
|
17 years |
Nicklas Nordborg |
References #368: Migration should migrate plugin settings for BASE 1 …
|
|
|
@2693
|
17 years |
Nicklas Nordborg |
Fixes #368: Migration should migrate plugin settings for BASE 1 plugins
|
|
|
@2690
|
17 years |
Johan Enell |
Merged log:branches/2.0#2618:2688 from branch 2.0 to trunk.
|
|
|
@2614
|
17 years |
Nicklas Nordborg |
References #332: Base 1 ID lookup is unstable
Should fix the original …
|
|
|
@2581
|
17 years |
Nicklas Nordborg |
Replaced fixed array with map. Use printStackTrace() method to always …
|
|
|
@2564
|
17 years |
Nicklas Nordborg |
Added Application.start(boolean) method that allows an application to …
|
|
|
@2395
|
17 years |
Nicklas Nordborg |
Fixed compilation error
|
|
|
@2318
|
17 years |
Nicklas Nordborg |
Set row and column coordinate of a feature
|
|
|
@2314
|
17 years |
Nicklas Nordborg |
Fixes #260: Remove AffyFeatures? table
Also removed a lot of unused …
|
|
|
@2306
|
17 years |
Jari Häkkinen |
Fixed subversion proterties.
|
|
|
@2304
|
17 years |
Jari Häkkinen |
Changed copyright statement.
|
|
|
@2302
|
17 years |
Nicklas Nordborg |
Fixed Javadoc warnings
|
|
|
@2203
|
17 years |
Nicklas Nordborg |
Fixes #1: column names in flatfile parser
Also changed migration so it …
|
|
|
@2169
|
17 years |
Nicklas Nordborg |
Fixes #148: Should read permission in BASE 1 be migrated as read/use …
|
|
|
@2027
|
18 years |
Gregory Vincic |
Fixed column order in the configuration view
|
|
|
@2023
|
18 years |
Gregory Vincic |
Fixed ticket #75 removing warnings and unused code
|
|
|
@2000
|
18 years |
Gregory Vincic |
Fixed ticket #77 and started working on removing unused code (ticket …
|
|
|
@1992
|
18 years |
Gregory Vincic |
Added -server flag which should fix the following error
Exception in …
|
|
|
@1982
|
18 years |
Gregory Vincic |
Fixing migration bug where users where mapped incorrectly
|
|
|
@1979
|
18 years |
Nicklas Nordborg |
Fixed ticket #100: IllegalArgumentException? occurred calling getter of …
|
|
|
@1967
|
18 years |
Gregory Vincic |
Organizing imports
|
|
|
@1958
|
18 years |
Gregory Vincic |
Fixed ticket #63
|
|
|
@1916
|
18 years |
Gregory Vincic |
Removing unused imports
|
|
|
@1900
|
18 years |
Gregory Vincic |
Fixing javadoc warnings
|
|
|
@1830
|
18 years |
Gregory Vincic |
Added LIMIT values to user query
|
|
|
@1797
|
18 years |
Gregory Vincic |
Fixed bug where roles where not assigned due to a closed DbControl?
|
|
|
@1774
|
18 years |
Gregory Vincic |
Cleaned up superfluous import statements and unused variables.
|
|
|
@1745
|
18 years |
Gregory Vincic |
Cleaned up comments
|
|
|
@1734
|
18 years |
Jari Häkkinen |
Fixed many warnings from javadoc. Added TODO comments all over with …
|
|
|
@1712
|
18 years |
Gregory Vincic |
Experiments whoose rawBioAssay does not have any rawData connected to …
|
|
|
@1711
|
18 years |
Gregory Vincic |
Removing log statement from prepareSTatementFromFile procedure
|
|
|
@1710
|
18 years |
Gregory Vincic |
Fixed bug where mean is lower than zero
|
|
|
@1707
|
18 years |
Gregory Vincic |
Fixed conflicts in RawBioAssayDataTransfer?
|
|
|
@1706
|
18 years |
Gregory Vincic |
Added ArrayDesign? check in RawBioAssayDataTransfer?
|
|
|
@1704
|
18 years |
Gregory Vincic |
Added ArrayDesign? check in RawBioAssayDataTransfer?
|
|
|
@1698
|
18 years |
Nicklas Nordborg |
Fixed compilation error
|
|
|
@1695
|
18 years |
Gregory Vincic |
Renamed selectProtocolFiless to selectProtocolFiles
|
|
|
@1694
|
18 years |
Gregory Vincic |
Clean up
|
|
|
@1693
|
18 years |
Gregory Vincic |
Preparing statements at startup. Users and Groups now store their …
|
|
|
@1691
|
18 years |
Gregory Vincic |
Closing ResultSets? in Transfer. Fixing invalid date exception in …
|
|
|
@1689
|
18 years |
Gregory Vincic |
Catching SQLExceptions for invalid dates
|
|
|
@1687
|
18 years |
Gregory Vincic |
Fixed date parsing for expiration date
|
|
|
@1686
|
18 years |
Gregory Vincic |
Fixed date parsing for expiration date
|
|
|
@1685
|
18 years |
Gregory Vincic |
Fixed missing description for RawBioAssays?. Renamed selectRawBioAssay …
|
|
|
@1684
|
18 years |
Gregory Vincic |
Initial revision
|
|
|
@1683
|
18 years |
Gregory Vincic |
Major rewrite. All SQL statements are now defined in a seperate file. …
|
|
|
@1679
|
18 years |
Nicklas Nordborg |
Added some raw data types and hardware / software in install
|
|
|
@1668
|
18 years |
Gregory Vincic |
Changed time calculation, which should eliminate the negative numbering.
|
|
|
@1665
|
18 years |
Gregory Vincic |
Removed some logging
|
|
|
@1661
|
18 years |
Nicklas Nordborg |
Added support for password encryption when loggin in
|
|
|
@1651
|
18 years |
Gregory Vincic |
Removed some logging
|
|
|
@1648
|
18 years |
Gregory Vincic |
Fixed bug with unavailable ArraySlides? and removed some logging
|
|
|
@1645
|
18 years |
Gregory Vincic |
Setting different SELECT limit if QUICK_TRANSFER = yes
|
|
|
@1644
|
18 years |
Gregory Vincic |
Removed calls to depraceted methods and fixed invalid use of null in …
|
|
|
@1643
|
18 years |
Gregory Vincic |
Catching NumberFormatException?
|
|
|
@1642
|
18 years |
Gregory Vincic |
Removed some logging
|
|
|
@1641
|
18 years |
Gregory Vincic |
Annotations generating InvalidDataException? are not migrated
|
|
|
@1637
|
18 years |
Gregory Vincic |
Fixed bug with equal filenames and removed some logging
|
|
|
@1633
|
18 years |
Gregory Vincic |
Logs migration ending
|
|
|
@1631
|
18 years |
Nicklas Nordborg |
Modified SessionControl?.impersonateLogin() to create a new …
|
|
|
@1630
|
18 years |
Gregory Vincic |
Fixed logging
|
|
|
@1625
|
18 years |
Gregory Vincic |
Changed error output to info
|
|
|
@1624
|
18 years |
Nicklas Nordborg |
Added Log4j logger to migration since it didn't compile now that the …
|
|
|
@1580
|
18 years |
Gregory Vincic |
Added ExperimentTransfer?
|
|
|
@1572
|
18 years |
Gregory Vincic |
Documenting
|
|
|
@1571
|
18 years |
Gregory Vincic |
Added migration of reportermap
|
|
|
@1570
|
18 years |
Gregory Vincic |
Initial revision of WizzzardTransfer?
|
|
|
@1569
|
18 years |
Gregory Vincic |
Fixed quota using new byteQuota in base schemaVersion 1.2.20
|
|
|
@1563
|
18 years |
Gregory Vincic |
Removing feature to delete files if transfer successful
|
|
|
@1561
|
18 years |
Gregory Vincic |
Added schema version control and uncommented plugin related roles. …
|
|
|
@1553
|
18 years |
Gregory Vincic |
Documenting and refactoring some DbControl? variables
|
|
|
@1551
|
18 years |
Gregory Vincic |
Fixed ArrayBlock? transfer which now saves Features properly. …
|
|
|
@1548
|
18 years |
Gregory Vincic |
Initial revision of ArrayBlockTransfer?. Added includeArrayBlock = yes …
|
|
|
@1547
|
18 years |
Gregory Vincic |
Added experimental localMySQL transfer and a seperated …
|
|
|
@1546
|
18 years |
Gregory Vincic |
Initial revision of ArrayTypePlateTransfer?
|
|
|
@1543
|
18 years |
Gregory Vincic |
Initial revision of ArrayType?
|
|
|
@1532
|
18 years |
Gregory Vincic |
Quick transfer is now configurable for testing purposes. Added some …
|
|
|
@1526
|
18 years |
Gregory Vincic |
Seperation of RawBioAssay? and it's data into two classes. Also added …
|
|
|
@1525
|
18 years |
Gregory Vincic |
Adding Image, and RawBioAssayParameters?
|
|
|
@1517
|
18 years |
Gregory Vincic |
Using the new image file transfer in UploadFileTransfer?
|
|
|
@1516
|
18 years |
Gregory Vincic |
saveItem now expects the item to already be saved to the database
|
|
|
@1515
|
18 years |
Gregory Vincic |
Adding Image file transfer
|
|
|
@1514
|
18 years |
Gregory Vincic |
Adding done() statement
|
|
|
@1513
|
18 years |
Gregory Vincic |
Adding done() statements
|
|
|
@1512
|
18 years |
Gregory Vincic |
Adding getDuration() method
|
|
|
@1511
|
18 years |
Gregory Vincic |
Added missing dependency control for protocolTransfer
|
|
|
@1510
|
18 years |
Gregory Vincic |
Using recursive run(PreparedStatement?,int,int)
|
|
|
@1509
|
18 years |
Gregory Vincic |
getReporterById handles exceptions
|
|
|
@1508
|
18 years |
Gregory Vincic |
itemList is initiated within run(PreparedStatement? ps, int from, int …
|
|
|
@1507
|
18 years |
Gregory Vincic |
Adding done() statements
|
|
|
@1506
|
18 years |
Gregory Vincic |
Adding comments and recoding MappedPlateTransfer?.
|
|
|
@1505
|
18 years |
Gregory Vincic |
createItem now returns the created Extract instead of null
|
|
|