source: trunk/src/core

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Diff Rev Age Author Log Message
(edit) @3190   16 years Johan Enell Merged log:branches/2.2.2#3116:3186 to trunk.
(edit) @3126   16 years Johan Enell Merged log:branches/2.2.1#3119:3123 trunk.
(edit) @3120   16 years Martin Svensson References #488. Update schema version without validating the measured …
(edit) @3097   16 years Nicklas Nordborg Fixed permission check problem that caused a query to return items the …
(edit) @3086   16 years Nicklas Nordborg Fixes #466: Remaining Quantity not display in extracts
(edit) @3079   16 years Nicklas Nordborg References #466: Remaining Quantity not display in extracts Fixed …
(edit) @3078   16 years Nicklas Nordborg References #459: Better error message if plugin jar can't be found …
(edit) @3076   16 years Nicklas Nordborg Added better log messages to find out where unclosed DbControl:s are …
(edit) @3075   16 years Nicklas Nordborg Fixes #475: Error running RMAExpress plug-in to create new root bioassay.
(edit) @3074   16 years Nicklas Nordborg Fixes #476: "Import" button is not shown even if the user has …
(edit) @3073   16 years Nicklas Nordborg Fixes #477: Creating a child item in the same transaction as the …
(edit) @3072   16 years Nicklas Nordborg Fixed another path problem when running server on Windows
(edit) @3068   16 years Johan Enell Merged log:branches/2.1.2#2991:3059 to trunk
(edit) @3062   16 years Nicklas Nordborg References #262 and #340: Added possibility to save preset for …
(edit) @3052   16 years Martin Svensson Fixes #459 Better error message if plugin jar can't be found
(edit) @3051   16 years Nicklas Nordborg References #262 and #340: Some minor improvements and fixes
(edit) @3050   16 years Nicklas Nordborg References #440: Update to latest versions of 3rd-party software …
(edit) @3049   16 years Nicklas Nordborg References #464: Permission denied when creting AnyToAny? I think this …
(edit) @3045   16 years Nicklas Nordborg References #262 and #340. The overview and validation is now complete. …
(edit) @3044   16 years Nicklas Nordborg Return each inherited annotation only once
(edit) @3033   16 years Nicklas Nordborg References #262, #340: First prototype for experiment overview. Reads …
(edit) @3030   16 years Nicklas Nordborg Fixed some problems with loading array slide and hybiridization in one …
(edit) @3028   16 years Nicklas Nordborg Fixed number parsing problems with int/long and double/float
(edit) @3023   16 years Nicklas Nordborg Fixes #311: Allow parsing of numbers with different locale settings
(edit) @3015   16 years Nicklas Nordborg Fixes #405: Highlight function in plot tool
(edit) @3011   16 years Martin Svensson Fixes #444 Plugins should check that they are allowed to …
(edit) @3004   16 years Martin Svensson Fixes #374 Restoring a Bioassayset or Transformation restores all …
(edit) @2998   17 years Nicklas Nordborg References #215: Incorrect use of DynamicSpotQuery?... Fixed problem …
(edit) @2993   17 years Nicklas Nordborg Fixes #215: Incorrect use of DynamicSpotQuery? in table view, plot …
(edit) @2992   17 years Johan Enell Merged log:branches/2.1#2846:2990 trunk.
(edit) @2981   17 years Nicklas Nordborg Fixes #447: Fix javadoc warnings
(edit) @2967   17 years Nicklas Nordborg References #440: Update to latest versions of 3rd-party software …
(edit) @2962   17 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly …
(edit) @2960   17 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly Get …
(edit) @2959   17 years Nicklas Nordborg References #412: Fix build.xml to make it more developer-friendly
(edit) @2942   17 years Nicklas Nordborg Fixes #317: Display and enter dates in different formats
(edit) @2941   17 years Martin Svensson References #334. All default values can now be set when …
(edit) @2939   17 years Martin Svensson References #334. Set default values for some BasicItems? in a project.
(edit) @2937   17 years Nicklas Nordborg Fixed a windows bug with path separators
(edit) @2933   17 years Nicklas Nordborg Fixes #172: Add externalId property to annotation type
(edit) @2932   17 years Nicklas Nordborg Fixes #140: Write documentation: 5e) Secondary file storage Also …
(edit) @2929   17 years Nicklas Nordborg Fixes #298: Add administrator page for viewing disk usage statistics
(edit) @2928   17 years Martin Svensson References #334. Updated the functions in core. Not completely …
(edit) @2927   17 years Nicklas Nordborg References #298: Add administrator page for viewing disk usage …
(edit) @2916   17 years Nicklas Nordborg References #348: Take ownership of items Framework is done. Used …
(edit) @2914   17 years Nicklas Nordborg Download servlet now sets a MIME type by checking the registered file …
(edit) @2913   17 years Nicklas Nordborg Internal subdirectory is now generated taking year, week, day in week …
(edit) @2906   17 years Martin Svensson References #334 Methods to get and set default items for a project. …
(edit) @2905   17 years Nicklas Nordborg Added Metadata.getOwnableItems()
(edit) @2904   17 years Nicklas Nordborg Create sub-directories based on the date for uploaded files to avoid …
(edit) @2902   17 years Nicklas Nordborg Fixes #345: List all items owned by a user
(edit) @2900   17 years Nicklas Nordborg Fixed checking of already existing login and external ID for users.
(edit) @2899   17 years Nicklas Nordborg Fixes #241: Files that have been used for parameters to a job can't be …
(edit) @2898   17 years Nicklas Nordborg Fixes #346: If an item is used, get information about the items that …
(edit) @2894   17 years Nicklas Nordborg References #346: If an item is used, get information about the items …
(edit) @2892   17 years Nicklas Nordborg Fixes #403: Make Bioassays and Bioassay sets annotatable
(edit) @2891   17 years Nicklas Nordborg Fixed NullPointerException? when node is empty for entryIterator() method
(edit) @2884   17 years Martin Svensson References #397 Unused fields and exception handling.
(edit) @2876   17 years Martin Svensson References #397 Removed fields that are not used.
(edit) @2875   17 years Nicklas Nordborg Fixes #339: Protocol parameters
(edit) @2874   17 years Martin Svensson References #397 Checks that the whole offset was skipped.
(edit) @2872   17 years Martin Svensson References #397 'Dead local store' fixed
(edit) @2868   17 years Nicklas Nordborg Fixes #189: Allow export plugins to send download immediately to …
(edit) @2867   17 years Martin Svensson References #397 The index of the parameters in PreparedStatement? …
(edit) @2866   17 years Martin Svensson References #397 Null pointer dereference
(edit) @2864   17 years Martin Svensson Fixed bug: Non-transient/non-serializable instance field in …
(edit) @2856   17 years Nicklas Nordborg References #189: Allow export plugins to send download immediately to …
(edit) @2854   17 years Nicklas Nordborg References #189: Allow export plugins to send download immediately to …
(edit) @2853   17 years Nicklas Nordborg Remove unsafe filename characters from User.getLogin() when used to …
(edit) @2842   17 years Nicklas Nordborg Import of plugin configurations is now displayed by progress reporter
(edit) @2840   17 years Jari Häkkinen Changed default sharing of plug-ins. Alphabetized plug-in list.
(edit) @2828   17 years Martin Svensson Fixes #336 Install common file formats with main installation. Problem …
(edit) @2825   17 years Jari Häkkinen Added BioAssaySetExporter? plugin to Install.java.
(edit) @2822   17 years Nicklas Nordborg Fixes #417: Verify that schema version of the database match the core API
(edit) @2821   17 years Jari Häkkinen Added getVersionString utility function.
(edit) @2819   17 years Jari Häkkinen Fixed svn:keywords property.
(edit) @2818   17 years Nicklas Nordborg Fixes #350: Switch to another user functionality
(edit) @2817   17 years Nicklas Nordborg Fixes #416: Only show plugin-buttons when the logged in user has …
(edit) @2816   17 years Nicklas Nordborg Fixed issues with proxy initialisation from statless session.
(edit) @2814   17 years Nicklas Nordborg Wrong return type for getColumn()
(edit) @2812   17 years Nicklas Nordborg Fixes #414: Experiment explorer not working in Postgres
(edit) @2809   17 years Nicklas Nordborg Preload features using a stateless session to decrease memory usage.
(edit) @2804   17 years Nicklas Nordborg Fixed problem with databases (ie. Postgres) that throws exceptions …
(edit) @2802   17 years Nicklas Nordborg Made it possible to select the requested permissions for a plugin
(edit) @2793   17 years Nicklas Nordborg Fixed possible null pointer exception
(edit) @2792   17 years Nicklas Nordborg Fixed possible null pointer exception
(edit) @2791   17 years Nicklas Nordborg Fixed possible null pointer exception
(edit) @2790   17 years Nicklas Nordborg Fixed division and error message
(edit) @2789   17 years Nicklas Nordborg Fixed invalid comparison to Float.NaN
(edit) @2788   17 years Nicklas Nordborg Fixed possible null pointer exception
(edit) @2787   17 years Nicklas Nordborg Added 'final' keyword to static constants
(edit) @2786   17 years Nicklas Nordborg Added 'final' keyword to static constants
(edit) @2785   17 years Nicklas Nordborg Fixed possible null pointer exception
(edit) @2784   17 years Nicklas Nordborg Fixed possible null pointer exception.
(edit) @2783   17 years Nicklas Nordborg Check for quota membership by quota group is now correct.
(edit) @2782   17 years Nicklas Nordborg Keep the trimmed value
(edit) @2781   17 years Nicklas Nordborg Fixed possible null pointer exception.
(edit) @2780   17 years Nicklas Nordborg Removed unneeded call to SessionControl?.getPluginPermissions()
(edit) @2778   17 years Nicklas Nordborg Fixes #401: Filter plugin - failed to correctly apply filter on M …
(edit) @2775   17 years Nicklas Nordborg Allow to unshare to Group.EVERYONE even if user doesn't have …
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