source: trunk/src/core

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Diff Rev Age Author Log Message
(edit) @4383   15 years Martin Svensson Fixed javadoc warnings
(edit) @4380   15 years Nicklas Nordborg Fixes #1064: Add support for dry-run to the plug-in system
(edit) @4379   15 years Nicklas Nordborg References #1082: Make it possible to re-enter parameters for a failed …
(edit) @4376   15 years Nicklas Nordborg Fixes #1066: Reset all filters functionality request
(edit) @4372   15 years Nicklas Nordborg References #1028: Plug-in for batch upload/modification of items …
(edit) @4371   15 years Nicklas Nordborg Merged patch release 2.7.2 to the trunk.
(edit) @4366   15 years Nicklas Nordborg References #1028: Plug-in for batch upload/modification of items …
(edit) @4358   15 years Nicklas Nordborg Fixes #1075: Lowess normaliztion fails on trunk but works on latest …
(edit) @4355   15 years Nicklas Nordborg Fixes #1073: Store current plug-in version when running a job
(edit) @4347   15 years Nicklas Nordborg Merged patch release 2.7.1 to the trunk
(edit) @4341   15 years Nicklas Nordborg Fixes #1056: Disk usage does not seem to report disk usage properly …
(edit) @4339   15 years Nicklas Nordborg Fixes #1058: Metadata.getPropertyValue() fails to get value for the …
(edit) @4336   15 years Martin Svensson Fixes #1049 Add the 'quadratic mean' to available Avg. method's for …
(edit) @4335   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
(edit) @4334   15 years Nicklas Nordborg References #1050: Add core support for storing analysed data in files …
(edit) @4330   15 years Martin Svensson Fixes #1010 Display progress reporter for plug-ins that are executing …
(edit) @4323   15 years Nicklas Nordborg Fixes #1043: JarClassLoader?.getInstance() doesn't create a new class …
(edit) @4322   15 years Nicklas Nordborg Fixes #1042: Improve error handling in the extensions system
(edit) @4321   15 years Nicklas Nordborg Fixes #1041: ZipException?: error in opening zip file in JarClassLoader?
(edit) @4320   15 years Nicklas Nordborg References #1036: Implement 'service' extension point Now it is ready …
(edit) @4319   15 years Nicklas Nordborg Fixes #1040: Exceptions when stopping Tomcat
(edit) @4317   15 years Nicklas Nordborg Fixes #1022: Add support for using regular expressions in queries
(edit) @4314   15 years Nicklas Nordborg Fixes #967: Assign the parent directory permissions to new …
(edit) @4312   15 years Nicklas Nordborg Fixes #981: Share all subdirectories and files when sharing a directory
(edit) @4311   15 years Nicklas Nordborg Fixes #1024: Allow users to select a specific job-agent when creating …
(edit) @4306   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
(edit) @4305   15 years Nicklas Nordborg References #1015: Add reporter list from tables that list …
(edit) @4302   15 years Nicklas Nordborg References #1016: Filter table using a reporter list I think this …
(edit) @4301   15 years Nicklas Nordborg References #1019: Reporter list manager - Create reporter list using …
(edit) @4299   15 years Nicklas Nordborg Fixes #1020: A reporter list should hold the number of reporters in it
(edit) @4284   15 years Nicklas Nordborg Merged patch release 2.6.3 to the trunk. Delta: tags/2.6.3 - tags/2.6.2
(edit) @4278   15 years Nicklas Nordborg Fixes #1011: Select multiple alternatives for a filter with a …
(edit) @4277   15 years Nicklas Nordborg Fixes #1025: Add Hql.size() expression
(edit) @4272   15 years Nicklas Nordborg Fixes #1018: Make it possible to filter on null at the same time as a …
(edit) @4270   15 years Nicklas Nordborg Fixes #1018: Make it possible to filter on null at the same time as a …
(edit) @4267   15 years Nicklas Nordborg References #974. Revert accidental renaming of method in [4256]
(edit) @4266   15 years Nicklas Nordborg Fixes #943: Base1PluginExecuter should import reporterlists
(edit) @4265   15 years Nicklas Nordborg Fixes #1001: Plug-ins that use the 'execute immediately' option can't …
(edit) @4264   15 years Nicklas Nordborg References #436: Create extension system for the web application …
(edit) @4257   15 years Nicklas Nordborg References #1009: Link from array design to job that imported the …
(edit) @4256   15 years Nicklas Nordborg References #974: Link from raw bioassay to job that imported the raw …
(edit) @4255   15 years Jari Häkkinen Typo.
(edit) @4254   15 years Nicklas Nordborg Fixes #972: Assign job to experiment when the job is created The …
(edit) @4252   15 years Nicklas Nordborg Fixes #1006: Make it possible to search for missing annotations
(edit) @4246   15 years Nicklas Nordborg Fixes #968: Raw data importer – Enhance feature mismatch error handling
(edit) @4243   15 years Nicklas Nordborg Fixes #920: Add support for aborting queries using a StatlessSession?
(edit) @4240   15 years Nicklas Nordborg Fixes #999: PrintMapImporter? should import feature diameter from TAM …
(edit) @4239   15 years Nicklas Nordborg References #994: Create GAL export plug-in for array designs Added …
(edit) @4237   15 years Nicklas Nordborg References #436: Create extension system for the web application …
(edit) @4236   15 years Nicklas Nordborg References #436: Create extension system for the web application …
(edit) @4233   15 years Nicklas Nordborg References #436: Create extension system for the web application …
(edit) @4232   15 years Nicklas Nordborg Merged patch release 2.6.2 to the trunk. Delta 2.6.2 - 2.6.1
(edit) @4221   15 years Nicklas Nordborg References #988: Add support for servlets in extensions The main …
(edit) @4220   15 years Nicklas Nordborg Fixes #955: Array slides – make test for barcode uniqueness
(edit) @4208   15 years Nicklas Nordborg References #436: Create extension system for the web application …
(edit) @4207   15 years Nicklas Nordborg References #436: Create extension system for the web application …
(edit) @4202   15 years Nicklas Nordborg References #436: Create extension system for the web application All …
(edit) @4198   15 years Nicklas Nordborg References #436: Create extension system for the web application …
(edit) @4195   15 years Nicklas Nordborg Merged patch release 2.6.1 to the trunk.
(edit) @4187   15 years Nicklas Nordborg Merged extensions branch into trunk
(edit) @4162   15 years Nicklas Nordborg References #937: Spelling of method name: Xml --> XML
(edit) @4160   15 years Nicklas Nordborg Fixes #937: Extend XMLUtil with methods that can validate an XML file …
(edit) @4142   15 years Nicklas Nordborg Fixes #931: Share items to EVERYONE without SHARE_TO_EVERYONE permission
(edit) @4141   15 years Nicklas Nordborg Fixes #929: An existing share to Everyone may block sharing an item to …
(edit) @4139   15 years Nicklas Nordborg Fixed Javadoc warnings
(edit) @4138   15 years Nicklas Nordborg Fixes #928
(edit) @4136   15 years Nicklas Nordborg Format of progress output was incosistent
(edit) @4134   15 years Nicklas Nordborg Fixes #921: Experiment overview should be updated with support for …
(edit) @4131   15 years Nicklas Nordborg Fixes #868: Support for chips with multiple arrays
(edit) @4129   15 years Nicklas Nordborg Fixes #923: Possible NullPointerException? in ExperimentOverview?
(edit) @4128   15 years Nicklas Nordborg References #636: Kill a running job Support for interruption in some …
(edit) @4127   15 years Nicklas Nordborg Fixes #893: Add support for setting a job's status to ABORTING
(edit) @4126   15 years Nicklas Nordborg Fxies #919: Long query against dynamic database may cause session to …
(edit) @4125   15 years Nicklas Nordborg Fixes #918: Adding multiple new DataFileTypes? to a platform or variant …
(edit) @4124   15 years Nicklas Nordborg Fixes #915: NullPointerException? when a raw data type is missing Use …
(edit) @4123   15 years Nicklas Nordborg Fixes #917: The progress reporter for a job should update the database …
(edit) @4122   15 years Nicklas Nordborg References #913: Plug-in JAR paths should support paths relative to …
(edit) @4120   15 years Nicklas Nordborg References #636: Kill a running job All core plug-ins can now be …
(edit) @4119   15 years Nicklas Nordborg References #892: Abort long-running queries Implemented a way to …
(edit) @4118   15 years Nicklas Nordborg References #636: Kill a running job Implemented support for …
(edit) @4117   15 years Nicklas Nordborg References #902: Support for multiple configuration files for raw data …
(edit) @4115   15 years Martin Svensson Fixes #912 Plugin auto-install can not perform import when not all …
(edit) @4113   15 years Nicklas Nordborg Fixes #913: Plug-in JAR paths should support paths relative to the …
(edit) @4112   15 years Nicklas Nordborg Fixes #911: Add support for having file validators and meta data …
(edit) @4110   15 years Martin Svensson References #894 Removed an unnecessary value check. The check has …
(edit) @4109   15 years Martin Svensson References #894 Allow 0 as a block number in BlockInfo?
(edit) @4108   15 years Nicklas Nordborg References #894: Support for array designs with other feature …
(edit) @4105   15 years Nicklas Nordborg Fixes #907: "Test with file" function should be able to wrap input stream
(edit) @4104   15 years Nicklas Nordborg Fixes #906: FlatFileParser? should not always throw an exception if a …
(edit) @4100   15 years Nicklas Nordborg Fixes #888: Make dynamic table creation code more stable Removed …
(edit) @4099   15 years Nicklas Nordborg References #888: Make dynamic table creation code more stable Now …
(edit) @4098   15 years Nicklas Nordborg Fixes #887: Internal job queue may start the same job more than once …
(edit) @4097   15 years Nicklas Nordborg Fixes #900: Verify that multiple raw data spots on the same raw …
(edit) @4096   15 years Nicklas Nordborg Fixes #902: Support for multiple configuration files for raw data …
(edit) @4095   15 years Johan Enell Merged patch release 2.5.1 to the trunk. Delta 2.5 - 2.5.1
(edit) @4093   15 years Johan Enell Reverted to revision r4089
(edit) @4090   15 years Johan Enell Merged patch release 2.5.1 to the trunk. Delta 2.5.1 - 2.5
(edit) @4089   15 years Nicklas Nordborg Fixes #901: GuiContext? should implement the equals() method
(edit) @4084   15 years Nicklas Nordborg Fixes #895: Add serialVersionUID to all classes that need it but …
(edit) @4083   15 years Nicklas Nordborg References #894: Support for array designs with other feature …
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