source: trunk

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Diff Rev Age Author Log Message
(edit) @2641   16 years Nicklas Nordborg References #351: External job server usage The core of the job agent …
(edit) @2640   16 years Martin Svensson References #220 Improved the handling of permissions in PluginDefinitions?
(edit) @2639   16 years Nicklas Nordborg target 'web' now depends on 'main'.
(edit) @2638   16 years Martin Svensson Added copyright and license header
(edit) @2637   16 years Nicklas Nordborg Deprecated net.sf.basedb.clients.web.util.Values. Use …
(edit) @2636   16 years Martin Svensson Refereces #220. Separate permissions for plugindefinitions. The use of …
(edit) @2635   16 years Nicklas Nordborg Semi-automatic detection if Hibernate mappings needs to be generated or not
(edit) @2634   16 years Nicklas Nordborg References #351: External job server usage Communincation with the …
(edit) @2633   16 years Jari Häkkinen Added link to http://base.thep.lu.se
(edit) @2632   16 years Nicklas Nordborg References #351: External job server usage Started to implement the …
(edit) @2631   16 years Nicklas Nordborg References #351: External job server usage Update web pages for …
(edit) @2630   16 years Nicklas Nordborg Fixed compilatio errors in test program after change to JobAgent?
(edit) @2629   16 years Nicklas Nordborg References #351: External job server usage Added web pages for …
(edit) @2628   16 years Jari Häkkinen Added svndigest:ignore property on test data files.
(edit) @2627   16 years Nicklas Nordborg References #351: External job server usage Added data layer class, …
(edit) @2626   16 years Martin Svensson Updated UML-diagram with entity value for plugin permissions.
(edit) @2625   16 years Nicklas Nordborg Added JobAgent? to UML diagram
(edit) @2624   16 years Martin Svensson Updated the documentation with information about plugin permissions.
(edit) @2623   16 years Nicklas Nordborg Removed links to the very old development status pages. Fixed redirect …
(edit) @2621   16 years Johan Enell Merge file added
(edit) @2616   16 years Nicklas Nordborg Oracle JDBC driver is not needed
(edit) @2615   16 years Nicklas Nordborg Added info about debug parameter for the migration.
(edit) @2614   16 years Nicklas Nordborg References #332: Base 1 ID lookup is unstable Should fix the original …
(edit) @2613   16 years Nicklas Nordborg Fixes incorrect plate mappings installed by previous releases.
(edit) @2612   16 years Nicklas Nordborg Fixed batch files for running test programs in windows.
(edit) @2611   16 years Johan Enell Fixex #264
(edit) @2610   16 years Martin Svensson Filled up some javaDocs
(edit) @2609   16 years Jari Häkkinen Added people to credits list.
(edit) @2608   16 years Jari Häkkinen Added information about the broken migration tool.
(edit) @2607   16 years Nicklas Nordborg Fixed NullPointerException? in configure() method
(edit) @2606   16 years Nicklas Nordborg Removed non-existing email address from plugins.
(edit) @2605   16 years Nicklas Nordborg Changed text about Type.ITEM to not talk about lists any more.
(edit) @2603   16 years Johan Enell added some html.javaScriptEncode lines
(edit) @2601   16 years Martin Svensson Updated Javadoc and added missing imports for javadoc ref.
(edit) @2600   16 years Nicklas Nordborg Updated About and exception dialog with jdbc driver version, java …
(edit) @2599   16 years Nicklas Nordborg Delete, Restore, Share and Export buttons now works in popup windows …
(edit) @2598   16 years Nicklas Nordborg Fixes #331: Remember the last used item when creating new items
(edit) @2597   16 years Nicklas Nordborg References #331: Remember the last used item when creating new items …
(edit) @2596   16 years Nicklas Nordborg References #331: Remember the last used item when creating new items …
(edit) @2594   16 years Martin Svensson Correct column names in plot types table, chapter 6, §7
(edit) @2593   16 years Martin Svensson Added a missing configuration value for the Raw data importer in the …
(edit) @2592   16 years Martin Svensson Made toolbar visible in popupwindows.
(edit) @2590   16 years Nicklas Nordborg Create hybridzations from multiple labeled extracts
(edit) @2589   16 years Nicklas Nordborg Fixed incorrect link when write permission is missing.
(edit) @2588   16 years Nicklas Nordborg Fixes #330: Make it possible to inherit annotations for new items
(edit) @2587   16 years Nicklas Nordborg Plates now save the annotations
(edit) @2586   16 years Nicklas Nordborg Get all annotatable parents
(edit) @2584   16 years Nicklas Nordborg References #330: Make it possible to inherit annotations for new items …
(edit) @2583   16 years Nicklas Nordborg Updated documentation about where to find test data
(edit) @2582   16 years Nicklas Nordborg
(edit) @2581   16 years Nicklas Nordborg Replaced fixed array with map. Use printStackTrace() method to always …
(edit) @2580   16 years Nicklas Nordborg Changed yellow icon background to grey
(edit) @2579   16 years Nicklas Nordborg Fixes #329: Auto-focus on input field when selecting annotation or …
(edit) @2576   16 years Nicklas Nordborg Test formulas before experiments since formulas are used in the …
(edit) @2575   16 years Nicklas Nordborg Copy function for plugin configurations now copy the parameters also.
(edit) @2574   16 years Nicklas Nordborg Don't show "Configure plugin" action if the logged in user doesn't …
(edit) @2573   16 years Nicklas Nordborg Fixes #328: Enable clicks on the enumeration option when annotating …
(edit) @2572   16 years Nicklas Nordborg Fixes #327: Not all users are listed as members in a group
(edit) @2571   16 years Nicklas Nordborg Original quantities are empty by default. Event dates default to …
(edit) @2570   16 years Nicklas Nordborg Removed list of labeled extracts from labels view since it is …
(edit) @2569   16 years Nicklas Nordborg Use dye-swap labeled extracts for dye-swap hybridizations
(edit) @2568   16 years Nicklas Nordborg Fixes #221: Create enhanced test procedure. References #222: Automated …
(edit) @2567   16 years Nicklas Nordborg Fixes #259: A job's progress doesn't get upadated when a job is …
(edit) @2566   16 years Martin Svensson Fixed an unhandled exception when trying to read the quantity of an …
(edit) @2565   16 years Nicklas Nordborg Pad plate names with 0 instead of space since Postgres ignores spaces …
(edit) @2564   16 years Nicklas Nordborg Added Application.start(boolean) method that allows an application to …
(edit) @2563   16 years Nicklas Nordborg Break after ten iterations to avoid endless loops
(edit) @2562   16 years Martin Svensson Fixed an unhandled exception when trying to read the quantity of an …
(edit) @2561   16 years Nicklas Nordborg Made some optimizations to the Lowess normalization. Arrays get a size …
(edit) @2560   16 years Nicklas Nordborg Removed duplicated formulas
(edit) @2559   16 years Nicklas Nordborg Dates are now shown with time information as well
(edit) @2558   16 years Nicklas Nordborg No publication date by default
(edit) @2557   16 years Martin Svensson Fixes #325 Corrupt page when viewing an biomaterial event
(edit) @2556   16 years Nicklas Nordborg Display label of each labeled extract
(edit) @2555   16 years Nicklas Nordborg Fixed ArrayDesignPlate?.getQuery() method to create a query that …
(edit) @2554   16 years Nicklas Nordborg Fixed incorrect message when no plates are connected with an array design.
(edit) @2553   16 years Nicklas Nordborg Removed "New plate" functionality since plates are usually imported …
(edit) @2552   16 years Nicklas Nordborg Display times with seconds.
(edit) @2551   16 years Johan Enell corrected a nullpointer in the reader
(edit) @2550   16 years Johan Enell made some major design changes looks a little bit better now
(edit) @2549   16 years Martin Svensson Creat a copy of an existing plugin configuration is added to the web-gui.
(edit) @2548   16 years Nicklas Nordborg Fixes #222: Automated test program suite for enhanced test procedure
(edit) @2547   16 years Johan Enell exports annotations
(edit) @2546   16 years Johan Enell made getIdFromPath public
(edit) @2545   16 years Nicklas Nordborg Now handles the case with a null reporter correctly
(edit) @2544   16 years Nicklas Nordborg Fixed index problem when linking to plates/wells (use 0-based instead …
(edit) @2543   16 years Nicklas Nordborg Let superclass handle error reporting
(edit) @2542   16 years Nicklas Nordborg Fixed equals() method to behave as documented
(edit) @2541   16 years Nicklas Nordborg Better error reportering which include line number in most error messages
(edit) @2540   16 years Nicklas Nordborg Added line number info to FlatFileParser?.Line object
(edit) @2539   16 years Nicklas Nordborg * FlatFileParse? now ignores comment lines within the data section. * …
(edit) @2538   16 years Nicklas Nordborg Fixed bad link on Run plugin button
(edit) @2537   16 years Nicklas Nordborg Fixes #324: Filter feature on block results in error message
(edit) @2536   16 years Nicklas Nordborg Fixes #197: Submenu onClick
(edit) @2535   16 years Nicklas Nordborg Fixes #319: Spot images shown in experiment explorer do not seem to …
(edit) @2534   16 years Nicklas Nordborg Fixes problem with disappearing buttons and page width in Plot tool.
(edit) @2533   16 years Martin Svensson Fixes #323 Corrupt link in Samples->'The sample'->Event
(edit) @2532   16 years Nicklas Nordborg Fixed link to bioassayset tools when viewing a transformation.
(edit) @2531   16 years Nicklas Nordborg Experiment explorer can now handle the case with zero matching reporters
(edit) @2530   16 years Nicklas Nordborg Added caching for AnnotationTypeCategoryData? as specified
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