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Diff Rev Age Author Log Message
(edit) @3765   14 years Martin Svensson References #364, Correct inconsistent variable/property 'plugin.dir' …
(edit) @3763   14 years Martin Svensson References #364, Added instructions how to make ant put …
(edit) @3762   14 years Nicklas Nordborg References #554, #746 and fixes #411. File and directories diagram …
(edit) @3761   14 years Martin Svensson Fixes #689 Increase 99 hits per page limit (list views). The limit is …
(edit) @3760   14 years Martin Svensson Fixes #364, Uses the existing JarClassLoader?, when reading/loading …
(edit) @3759   14 years Martin Svensson References #364, documentation
(edit) @3757   14 years Nicklas Nordborg References #721: Store data in files instead of in the database …
(edit) @3756   14 years Nicklas Nordborg Allow 'entrytbl' tags to have a 'frame' attribute in the same way as …
(edit) @3755   14 years Martin Svensson References #364, documentation
(edit) @3753   14 years Martin Svensson References #364, documentation
(edit) @3751   14 years Nicklas Nordborg References #411. Migration should now automatically compress files …
(edit) @3750   14 years Nicklas Nordborg References #411. Compiled AffxFusion?.jar with target="1.5" to make it …
(edit) @3741   14 years Nicklas Nordborg Fixes #758: Store number of features in a database column of ArrayDesign?
(edit) @3740   14 years Martin Svensson Fixes #733 Documentation
(edit) @3738   14 years Jari Häkkinen Removed invalid help info regarding 'ant doc' and 'ant docbook'.
(edit) @3737   14 years Nicklas Nordborg Added modified AffxFusion?.jar that can read from InputStream? for some …
(edit) @3733   14 years Martin Svensson References #364 The functionallity is more or less done. The internal …
(edit) @3732   14 years Martin Svensson References #733 The PluginConfigurationImporter? class can be used …
(edit) @3725   14 years Jari Häkkinen Merged patch release 2.4.1 to the trunk. Delta 2.4.1 - 2.4.
(edit) @3720   14 years Martin Svensson References #733. The PluginConfigurationImporter? can now import a …
(edit) @3719   14 years Nicklas Nordborg References #411: Most of the basic functionality is now in place and …
(edit) @3715   14 years Nicklas Nordborg References #746 and #554. Added new new UML file for MagicDraw? 12.5. …
(edit) @3714   14 years Martin Svensson References #364.
(edit) @3712   14 years Martin Svensson References #364. Most of the plugin settings can be saved now, but …
(edit) @3708   14 years Martin Svensson References #364 Configuring the installation is allmost done.
(edit) @3706   14 years Martin Svensson References #364 Started updating the GUI to support auto installation …
(edit) @3705   14 years Peter Johansson refs #639
(edit) @3704   14 years Martin Svensson References #364 Moved the PluginInfo? class to another package, added a …
(edit) @3701   14 years Jari Häkkinen Addresses #732. Fixing broken basehacks link.
(edit) @3700   14 years Martin Svensson References #364 The main functions in core is now done for this. A …
(edit) @3699   14 years Jari Häkkinen URL to demo server change
(edit) @3698   14 years Martin Svensson References #364 Automatic install non-core plugins. First check-in, …
(edit) @3697   14 years Jari Häkkinen Removed 'reference reference' repeat.
(edit) @3691   14 years Jari Häkkinen Changes for future release 2.5
(edit) @3689   14 years Jari Häkkinen Fixes #615.
(edit) @3688   14 years Jari Häkkinen Updated link to release procedures.
(edit) @3687   14 years Jari Häkkinen Removed links to deleted files.
(edit) @3686   14 years Jari Häkkinen Refs #615 and fixed spelling.
(edit) @3685   14 years Jari Häkkinen Removed obsolete files.
(edit) @3684   14 years Jari Häkkinen Fixes #664
(edit) @3683   14 years Jari Häkkinen Spelling.
(edit) @3682   14 years Jari Häkkinen Added Peter Johansson.
(edit) @3681   14 years Nicklas Nordborg References #721: Store data in files instead of in the database First …
(edit) @3680   14 years Nicklas Nordborg Removed explicit call to System.gc(). Better command line parameters …
(edit) @3679   14 years Jari Häkkinen Changing the pesky "a (ä) character to a.
(edit) @3678   14 years Nicklas Nordborg Require DTD files to be encoded in ISO-8859-1
(edit) @3677   14 years Jari Häkkinen Added copyright statement.
(edit) @3676   14 years Jari Häkkinen Trying to fix illegal character problem.
(edit) @3675   14 years Jari Häkkinen Fixing copyright statements. Fixing svn properties.
(edit) @3674   14 years Jari Häkkinen Added Dominic to .svndigest config.
(edit) @3673   14 years Jari Häkkinen Updated .svndigest config.
(edit) @3672   14 years Jari Häkkinen Removed obsolete links and information.
(edit) @3671   14 years Jari Häkkinen Fixes #656. New release procedures are added to wiki:ReleaseProcedure.
(edit) @3670   14 years Nicklas Nordborg Included numbers with scientific notation in the test.
(edit) @3669   14 years Jari Häkkinen Removing obsolete file.
(edit) @3668   14 years Martin Svensson Fixes #724 Nullpointer exception when 'overwrite' is not set in …
(edit) @3667   14 years Nicklas Nordborg Display free memory before AND after System.gc().
(edit) @3666   14 years Nicklas Nordborg References #469: Added negative numbers to test case with dirty data
(edit) @3665   14 years Martin Svensson Fixes #514 Change permissions in Power User
(edit) @3664   14 years Nicklas Nordborg Fixes #722: Create DynamicReporterQuery?
(edit) @3663   14 years Nicklas Nordborg Measure performance for reporter migration.
(edit) @3662   14 years Martin Svensson Fixes #551 Read "Plugin developer" section
(edit) @3661   14 years Nicklas Nordborg References #720: Progress reporter when emptying trashcan Progress …
(edit) @3660   14 years Martin Svensson Fixes #595 Read "Appendix: extended-properties.xml reference"
(edit) @3659   14 years Nicklas Nordborg References #294: Performance testing Added framework for testing BASE …
(edit) @3658   14 years Nicklas Nordborg Show stacktrace when a plug-in reports an error
(edit) @3657   14 years Nicklas Nordborg Migrate reporters first.
(edit) @3656   14 years Nicklas Nordborg Fixes #719: Add support for JEP if() function
(edit) @3655   14 years Nicklas Nordborg Fixes #720: Progress reporter when emptying trashcan
(edit) @3651   14 years Jari Häkkinen Fixed svn properties issues.
(edit) @3650   14 years Nicklas Nordborg Fixed performance problem with reporter migration. Added support for …
(edit) @3649   14 years Nicklas Nordborg Make sure list of formulas get loaded to avoid …
(edit) @3648   14 years Peter Johansson refs #639 removing the exportPlainMatrix method.
(edit) @3647   14 years Nicklas Nordborg Fixes #718: BioAssaySet? tries to calculate number of spots and …
(edit) @3646   14 years Nicklas Nordborg References #451: Zipped download Fixed test program and added it to …
(edit) @3645   14 years Peter Johansson refs #639 stupid version of exportPureMatrix method that simply …
(edit) @3644   14 years Nicklas Nordborg Fixes #716: Plugin configuration import should be able ot set the …
(edit) @3643   14 years Nicklas Nordborg Fixes #451: Zipped download Added user and plug-in developer documentation
(edit) @3642   14 years Nicklas Nordborg Fixes #715: Install should set same permission on plugin …
(edit) @3641   14 years Nicklas Nordborg References #451: Zipped download Major redesign of the packing …
(edit) @3640   14 years Johan Enell a plugin can have no parameters
(edit) @3639   14 years Johan Enell Fixes #714
(edit) @3638   14 years Nicklas Nordborg Fixes #713: Differences in the configuration file from base1
(edit) @3637   14 years Nicklas Nordborg Fixes #710: Allow subclasses to AbstractFlatFileParser? to participate …
(edit) @3636   14 years Nicklas Nordborg References #486: Added Jeremy Davis-Turak to credits.txt for helping …
(edit) @3635   14 years Nicklas Nordborg References #358: Better info from Migration tool Show log message …
(edit) @3634   14 years Nicklas Nordborg Fixes #573: Trim whitespace when checking for unique values
(edit) @3633   14 years Nicklas Nordborg References #574. Test program didn't report error properly
(edit) @3632   14 years Johan Enell Fixes #713
(edit) @3631   14 years Nicklas Nordborg Fixes #701: JarClassLoader? should be able to auto-reload based on timestamp
(edit) @3630   14 years Nicklas Nordborg Fixes #704: Make sure DbControl? is closed from www/common/import/index.jsp
(edit) @3629   14 years Nicklas Nordborg Fixes #712, References #711
(edit) @3628   14 years Nicklas Nordborg References #625: PrintMapFlatFileImporter?.isInContext now checks if …
(edit) @3627   14 years Nicklas Nordborg References #709: Forgot to add predefined query
(edit) @3626   14 years Nicklas Nordborg Fixes #486: Import raw data from the Illumina platform
(edit) @3625   14 years Nicklas Nordborg Fixes #709: Install should install missing plug-in configurations when …
(edit) @3624   14 years Nicklas Nordborg Fixes #708: "NaN" and "Infinity" values in files causes SqlException?
(edit) @3623   14 years Johan Enell References #706 Added average for genepix.flags
(edit) @3622   14 years Johan Enell Fixes #700, #590
(edit) @3621   14 years Nicklas Nordborg Fixes #669
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