#475 |
Error running RMAExpress plug-in to create new root bioassay.
|
Nicklas Nordborg
|
defect
|
blocker
|
core
|
trunk
|
#10 |
Analysis: Hierarchical clustering
|
Jari Häkkinen
|
task
|
critical
|
coreplugins
|
trunk
|
#339 |
Protocol parameters
|
Nicklas Nordborg
|
enhancement
|
critical
|
core
|
|
#397 |
Use the FindBugs program to check the BASE 2 code
|
Martin Svensson
|
task
|
critical
|
core
|
trunk
|
#440 |
Update to latest versions of 3rd-party software
|
Nicklas Nordborg
|
task
|
critical
|
core
|
|
#189 |
Allow export plugins to send download immediately to client
|
Nicklas Nordborg
|
enhancement
|
major
|
core
|
|
#215 |
Incorrect use of DynamicSpotQuery in table view, plot function, filter function, etc.
|
Nicklas Nordborg
|
defect
|
major
|
web
|
|
#334 |
Project default items
|
Martin Svensson
|
enhancement
|
major
|
core
|
|
#345 |
List all items owned by a user
|
Nicklas Nordborg
|
task
|
major
|
web
|
|
#346 |
If an item is used, get information about the items that are using it
|
Nicklas Nordborg
|
enhancement
|
major
|
core
|
|
#348 |
Take ownership of items
|
Nicklas Nordborg
|
enhancement
|
major
|
web
|
|
#352 |
Connect parts of the TM4 software suite to BASE
|
Jari Häkkinen
|
task
|
major
|
core
|
trunk
|
#365 |
Use java web start to launch plug-ins
|
Jari Häkkinen
|
task
|
major
|
web
|
|
#383 |
Should more docs be shipped with the binary package?
|
Nicklas Nordborg
|
defect
|
major
|
documentation
|
|
#402 |
Add shortcut button for 'current item', 'current experiment' and 'current EExplorer'
|
Nicklas Nordborg
|
enhancement
|
major
|
web
|
|
#403 |
Make Bioassays and Bioassay sets annotatable
|
Nicklas Nordborg
|
enhancement
|
major
|
core
|
|
#412 |
Fix build.xml to make it more developer-friendly
|
Nicklas Nordborg
|
enhancement
|
major
|
install
|
|
#428 |
HTML tags in annotation values are not escaped
|
Martin Svensson
|
defect
|
major
|
web
|
2.1
|
#439 |
Base file export
|
Johan Enell
|
enhancement
|
major
|
coreplugins
|
trunk
|
#444 |
Plugins should check that they are allowed to create/overwrite files ...
|
Martin Svensson
|
enhancement
|
major
|
web
|
trunk
|
#453 |
End date is not allowed to be empty
|
Johan Enell
|
defect
|
major
|
web
|
trunk
|
#455 |
Empty date field is not accepted at several places
|
Martin Svensson
|
defect
|
major
|
web
|
|
#457 |
Update install instructions for release 2.2
|
everyone
|
enhancement
|
major
|
install
|
trunk
|
#464 |
Permission denied when creting AnyToAny
|
Nicklas Nordborg
|
defect
|
major
|
core
|
trunk
|
#467 |
GPR import problem
|
Johan Enell
|
defect
|
major
|
web
|
2.1.1
|
#471 |
Filenames with () are not treated well by trac
|
Jari Häkkinen
|
defect
|
major
|
documentation
|
trunk
|
#472 |
java.lang.OutOfMemoryError: PermGen space
|
Jari Häkkinen
|
defect
|
major
|
core
|
|
#474 |
Creation of new plug-in definition throws an exception if jar is not found ...
|
Johan Enell
|
defect
|
major
|
web
|
trunk
|
#476 |
"Import" button is not shown even if the user has permission to use an import plugin in a given context
|
Nicklas Nordborg
|
defect
|
major
|
web
|
|
#98 |
"Excluded" items are still included if a list is exported
|
Martin Svensson
|
defect
|
minor
|
web
|
|
#138 |
Write documentation: 5c) Authentication plug-ins
|
Nicklas Nordborg
|
task
|
minor
|
documentation
|
|
#140 |
Write documentation: 5e) Secondary file storage
|
Nicklas Nordborg
|
task
|
minor
|
documentation
|
|
#172 |
Add externalId property to annotation type
|
Nicklas Nordborg
|
enhancement
|
minor
|
core
|
|
#262 |
Overview of an experiment
|
Nicklas Nordborg
|
task
|
minor
|
web
|
trunk
|
#298 |
Add administrator page for viewing disk usage statistics
|
Nicklas Nordborg
|
enhancement
|
minor
|
web
|
trunk
|
#340 |
Experiment validation tool
|
Nicklas Nordborg
|
task
|
minor
|
coreplugins
|
|
#347 |
Give administrators access to other users trashcans
|
Nicklas Nordborg
|
enhancement
|
minor
|
core
|
|
#374 |
Restoring a Bioassayset or Transformation restores all child bioassay sets and transformations but not the parents
|
Martin Svensson
|
defect
|
minor
|
web
|
|
#405 |
Highlight function in plot tool
|
Nicklas Nordborg
|
enhancement
|
minor
|
web
|
|
#431 |
Multiple tables from the Table taglib on the same HTML page interfere with each other
|
Nicklas Nordborg
|
defect
|
minor
|
web
|
|
#447 |
Fix javadoc warnings
|
everyone
|
defect
|
minor
|
documentation
|
|
#459 |
Better error message if plugin jar can't be found
|
Martin Svensson
|
defect
|
minor
|
core
|
|
#478 |
Plate Importer requests more permissions
|
Martin Svensson
|
defect
|
minor
|
coreplugins
|
|
#483 |
Add a direct start icon for export of bioassaysets in analysis tree
|
Nicklas Nordborg
|
enhancement
|
minor
|
web
|
|
#241 |
Files that have been used for parameters to a job can't be deleted properly
|
Nicklas Nordborg
|
defect
|
trivial
|
core
|
|
#311 |
Allow parsing of numbers with different locale settings
|
Nicklas Nordborg
|
enhancement
|
trivial
|
core
|
trunk
|
#317 |
Display and enter dates in different formats
|
Nicklas Nordborg
|
enhancement
|
trivial
|
web
|
trunk
|
#399 |
Losing Bioassay table in EExplorer when browsing positions
|
Johan Enell
|
defect
|
trivial
|
web
|
2.0.1
|
#437 |
build from source doesn't include misc/sql/*.sql
|
everyone
|
defect
|
trivial
|
install
|
|
#465 |
'Encrypt password' checkbox should not be visible when external authenitcation is used
|
Nicklas Nordborg
|
defect
|
trivial
|
web
|
|
#473 |
Cannot import a plug-in configuration as administrator (not 'root' user)
|
Nicklas Nordborg
|
defect
|
trivial
|
core
|
2.1.2
|
#477 |
Creating a child item in the same transaction as the parent item gives a PermissionDeniedException
|
Nicklas Nordborg
|
defect
|
trivial
|
core
|
|