Opened 8 years ago

Closed 8 years ago

Last modified 8 years ago

#1942 closed enhancement (fixed)

Upgrade 3-rd party libraries

Reported by: Nicklas Nordborg Owned by: everyone
Priority: minor Milestone: BASE 3.6
Component: build Version:
Keywords: Cc:

Description

It's time for this again. Last time was #1809.

Change History (13)

comment:1 Changed 8 years ago by Nicklas Nordborg

Component: core → build

comment:2 Changed 8 years ago by Nicklas Nordborg

(In [6899]) References #1942: Upgrade 3-rd party libraries

Updated Hibernate to 4.3.9.

comment:3 Changed 8 years ago by Nicklas Nordborg

(In [6900]) References #1942: Upgrade 3-rd party libraries

Updated JDOM to 2.0.6

comment:4 Changed 8 years ago by Nicklas Nordborg

(In [6901]) References #1942: Upgrade 3-rd party libraries

Updated MySQL connector to 5.1.35

comment:5 Changed 8 years ago by Nicklas Nordborg

(In [6902]) References #1942: Upgrade 3-rd party libraries

Updated PostgreSQL JDBC driver to 9.4-1201.jdbc41

comment:6 Changed 8 years ago by Nicklas Nordborg

(In [6903]) References #1942: Upgrade 3-rd party libraries

Updated JFreeChart to 1.0.19

comment:7 Changed 8 years ago by Nicklas Nordborg

(In [6904]) References #1942: Upgrade 3-rd party libraries

Updated Apache HttpComponents? to 4.4.1

comment:8 Changed 8 years ago by Nicklas Nordborg

(In [6905]) References #1942: Upgrade 3-rd party libraries

Updated Apache Commons Email to 1.3.3 and JavaMail? to 1.5.3

comment:9 Changed 8 years ago by Nicklas Nordborg

(In [6906]) References #1942: Upgrade 3-rd party libraries

Updated jBCrypt to 0.4.

comment:10 Changed 8 years ago by Nicklas Nordborg

(In [6907]) References #1942: Upgrade 3-rd party libraries

Updated JavaSysMon? to 0.3.5

comment:11 Changed 8 years ago by Nicklas Nordborg

Resolution: → fixed
Status: new → closed

Closing this ticket for now.

comment:12 Changed 8 years ago by Nicklas Nordborg

This should reference #1941 and not 1942!!

(In [6908]) References #1942: Store experimental factor values as part experiments

Added RootRawBioAssayData class. A database schema update is moving over existing raw bioassays to the new table and then drops the old table.

Some old mappings have been kept and this change doesn't introduce any incompatibility in the public API, but the new class is still only used for the link and not for annotations/experimental factors.

Last edited 8 years ago by Nicklas Nordborg (previous) (diff)

comment:13 Changed 8 years ago by Nicklas Nordborg

(In [6970]) References #1942: Upgrade 3-rd party libraries

Found an incorrect file reference to the Hibernate JAR file.

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