Timeline



Dec 21, 2005:

3:50 PM Changeset [1733] by Jari Häkkinen
Changed download to alpha6, and added some comments about the release.
3:43 PM Changeset [1732] by Jari Häkkinen
Alpha 6 release.
3:37 PM Changeset [1731] by Jari Häkkinen
Bumped alpha version.

Dec 20, 2005:

3:40 PM Changeset [1730] by Nicklas Nordborg
Prototype for configuring plugins is now working
12:04 PM Changeset [1729] by Nicklas Nordborg
Spelling error in Javadoc

Dec 19, 2005:

3:47 PM Changeset [1728] by Nicklas Nordborg
Fixed listing of gui contexts for plugins
3:42 PM Changeset [1727] by Nicklas Nordborg
View / Reporters now use the new list design Experimental view/edit page
9:59 AM Changeset [1726] by Nicklas Nordborg
Contexts can now be made public (ie. shared to everyone)

Dec 16, 2005:

2:58 PM Changeset [1725] by Nicklas Nordborg
Install installed an unimplemented plugin
2:50 PM Changeset [1724] by Nicklas Nordborg
Updated Javadoc Made context client application dependant
10:16 AM Changeset [1723] by Gregory Vincic
Adding import of ...Restrictions

Dec 15, 2005:

4:54 PM Changeset [1722] by Nicklas Nordborg
Date annotations was not saved unless edit box was clicked NPE in …
4:51 PM Changeset [1721] by Johan Enell
added getPlate(position) to ArrayDesign?
4:35 PM Changeset [1720] by Johan Enell
change mysql connector to 3.1
4:34 PM Changeset [1719] by Johan Enell
added position to arraydesign plate connection
4:33 PM Changeset [1718] by Johan Enell
added position to arraydesign plate connection
3:03 PM Changeset [1717] by Nicklas Nordborg
Fixed sort bug on "old" list pages due to case change of asc/desc to …
2:45 PM Changeset [1716] by Nicklas Nordborg
clearFilter can now clear radio buttons as well
2:07 PM Changeset [1715] by Nicklas Nordborg
New list page design is now working for raw bioassays

Dec 14, 2005:

5:38 PM Changeset [1714] by Nicklas Nordborg
Added PresetSelect? to Table taglib which handles lots of context …
2:20 PM Changeset [1713] by Nicklas Nordborg
Updates to the new list interface. index.jsp is now a sort of …
1:32 PM Changeset [1712] by Gregory Vincic
Experiments whoose rawBioAssay does not have any rawData connected to …
1:31 PM Changeset [1711] by Gregory Vincic
Removing log statement from prepareSTatementFromFile procedure
1:31 PM Changeset [1710] by Gregory Vincic
Fixed bug where mean is lower than zero
9:13 AM Changeset [1709] by Nicklas Nordborg
BUG: Could not delete ContextData? objects

Dec 13, 2005:

2:53 PM Changeset [1708] by Nicklas Nordborg
Added PropertyFilter? to ItemContext?. View / Raw bioassays is the test …
1:15 PM Changeset [1707] by Gregory Vincic
Fixed conflicts in RawBioAssayDataTransfer?
1:14 PM Changeset [1706] by Gregory Vincic
Added ArrayDesign? check in RawBioAssayDataTransfer?
1:13 PM Changeset [1705] by Johan Enell
forgot an s on the table name
1:11 PM Changeset [1704] by Gregory Vincic
Added ArrayDesign? check in RawBioAssayDataTransfer?
1:10 PM Changeset [1703] by Johan Enell
added index to the arraydesign-plate connection

Dec 12, 2005:

3:56 PM Changeset [1702] by Nicklas Nordborg
Added PropertyFilter? to UML

Dec 9, 2005:

2:32 PM Changeset [1701] by Nicklas Nordborg
Added GuiContext? and ItemContext?
2:31 PM Changeset [1700] by Nicklas Nordborg
Started to change how the import function works
2:23 PM Changeset [1699] by Nicklas Nordborg
"Current" is now the default option

Dec 8, 2005:

3:49 PM Changeset [1698] by Nicklas Nordborg
Fixed compilation error
12:49 PM Changeset [1697] by Nicklas Nordborg
Updated development ideas

Dec 7, 2005:

4:02 PM Changeset [1696] by Nicklas Nordborg
Changes to the plugin system. Added GuiContext?
11:03 AM Changeset [1695] by Gregory Vincic
Renamed selectProtocolFiless to selectProtocolFiles
9:42 AM Changeset [1694] by Gregory Vincic
Clean up

Dec 6, 2005:

2:00 PM Changeset [1693] by Gregory Vincic
Preparing statements at startup. Users and Groups now store their …
8:59 AM Changeset [1692] by Nicklas Nordborg
IntensityFormula?.getTitle returned the name instead of the title

Dec 5, 2005:

2:26 PM Changeset [1691] by Gregory Vincic
Closing ResultSets? in Transfer. Fixing invalid date exception in …
12:32 PM Changeset [1690] by Nicklas Nordborg
More bugs with "default" raw data type in test programs
12:03 PM Changeset [1689] by Gregory Vincic
Catching SQLExceptions for invalid dates
11:33 AM Changeset [1688] by Nicklas Nordborg
Test programs where still using the "default" raw data type.
11:00 AM Changeset [1687] by Gregory Vincic
Fixed date parsing for expiration date
10:51 AM Changeset [1686] by Gregory Vincic
Fixed date parsing for expiration date
10:26 AM Changeset [1685] by Gregory Vincic
Fixed missing description for RawBioAssays?. Renamed selectRawBioAssay …

Dec 2, 2005:

5:52 PM Changeset [1684] by Gregory Vincic
Initial revision
5:51 PM Changeset [1683] by Gregory Vincic
Major rewrite. All SQL statements are now defined in a seperate file. …
2:25 PM Changeset [1682] by Nicklas Nordborg
Added reporter lists
1:34 PM Changeset [1681] by Nicklas Nordborg
Fixed bug where properties in ArrayDesignBlock:s didn't get updated
11:30 AM Changeset [1680] by Nicklas Nordborg
Fixed spot images servlet so the images are cached by the browser.
10:52 AM Changeset [1679] by Nicklas Nordborg
Added some raw data types and hardware / software in install

Dec 1, 2005:

4:07 PM Changeset [1678] by Johan Enell
changed mysql jdbc to version 3.1.12
2:36 PM Changeset [1677] by Nicklas Nordborg
Fixed bug in test for encrypted password
2:32 PM Changeset [1676] by Nicklas Nordborg
Fixed installation problem, doesn't have to start timer and job queue
1:44 PM Changeset [1675] by Nicklas Nordborg
Added View / experiments
11:16 AM Changeset [1674] by Nicklas Nordborg
It is now possible to generate spot images through the web interface
8:50 AM Changeset [1673] by Nicklas Nordborg
Added Spot images servlet so we can view spot images of raw data

Nov 30, 2005:

2:52 PM Changeset [1672] by Nicklas Nordborg
Added View/Raw? bioassays
9:14 AM Changeset [1671] by Nicklas Nordborg
Updated list of development ideas

Nov 26, 2005:

8:56 AM Changeset [1670] by Jari Häkkinen
Added some svn: properties.

Nov 25, 2005:

2:41 PM Changeset [1669] by Nicklas Nordborg
Added features to array design
1:02 PM Changeset [1668] by Gregory Vincic
Changed time calculation, which should eliminate the negative numbering.
12:20 PM Changeset [1667] by Nicklas Nordborg
Added print robot and protocol to array batch
11:48 AM Changeset [1666] by Nicklas Nordborg
Added basic administration of Array design, Array batch, Array slide
10:57 AM Changeset [1665] by Gregory Vincic
Removed some logging
9:32 AM Changeset [1664] by Nicklas Nordborg
Made password encyption more secure by generating random challenge …

Nov 24, 2005:

3:33 PM Changeset [1663] by Nicklas Nordborg
Added View sessions
2:30 PM Changeset [1662] by Nicklas Nordborg
Added javascript MD5 library
2:30 PM Changeset [1661] by Nicklas Nordborg
Added support for password encryption when loggin in
1:15 PM Changeset [1660] by Nicklas Nordborg
Implemented interface for merging of plates
10:46 AM Changeset [1659] by Nicklas Nordborg
Added image to plate mapping
8:42 AM Changeset [1658] by Nicklas Nordborg
Can now add annotations to wells

Nov 23, 2005:

8:31 PM Changeset [1657] by Nicklas Nordborg
Updated development status
4:06 PM Changeset [1656] by Nicklas Nordborg
Added Wells admin
2:58 PM Changeset [1655] by Nicklas Nordborg
Added plate events admin
2:55 PM Changeset [1654] by Nicklas Nordborg
Added HQL right join and support for WITH restriction in join clause
9:41 AM Changeset [1653] by Nicklas Nordborg
Added plate event types administration
8:54 AM Ticket #11 (Migration: AnnotationTransfer InvalidDataException not caught) closed by Gregory Vincic
fixed: Fixed. There is a problem concerning that Base 1 allows annotations …

Nov 22, 2005:

4:04 PM Changeset [1652] by Nicklas Nordborg
Added Array LIMS / plates
3:00 PM Changeset [1651] by Gregory Vincic
Removed some logging
2:59 PM Changeset [1650] by Nicklas Nordborg
Fixed bad UTF-8 characters
2:36 PM Changeset [1649] by Nicklas Nordborg
Fixed bug in ReporterFlatFileImporter? (Not converting values to …
1:37 PM Changeset [1648] by Gregory Vincic
Fixed bug with unavailable ArraySlides? and removed some logging
9:41 AM Changeset [1647] by Nicklas Nordborg
Plugin configuration

Nov 21, 2005:

2:44 PM Changeset [1646] by Nicklas Nordborg
Added plugin configuration admin
2:26 PM Changeset [1645] by Gregory Vincic
Setting different SELECT limit if QUICK_TRANSFER = yes
2:19 PM Changeset [1644] by Gregory Vincic
Removed calls to depraceted methods and fixed invalid use of null in …
10:53 AM Changeset [1643] by Gregory Vincic
Catching NumberFormatException?
10:34 AM Changeset [1642] by Gregory Vincic
Removed some logging
9:50 AM Ticket #11 (Migration: AnnotationTransfer InvalidDataException not caught) created by Gregory Vincic
The setValue methods on lines 143 through 156 in …
9:45 AM Changeset [1641] by Gregory Vincic
Annotations generating InvalidDataException? are not migrated
8:17 AM Changeset [1640] by Nicklas Nordborg
Abstract flat file importer now checks for thread interruption
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