Timeline
Jun 29, 2009:
- 11:17 AM Ticket #1347 (Enable Appearance feature 'Display long text' in Experiment - ...) created by
- The Appearance feature 'Display long texts' with options 'On hover' …
Jun 26, 2009:
- 2:25 PM Ticket #1330 (Add support function in JavaScript for parsing AJAX responses) closed by
- fixed: Seems to work well also for the GenePattern ajax calls.
- 2:17 PM Ticket #1346 (TestAnyToAny is not executed from TestAll) closed by
- fixed: (In [5022]) Fixes #1346: TestAnyToAny? is not executed from TestAll?
- 2:17 PM Changeset [5022] by
- Fixes #1346: TestAnyToAny? is not executed from TestAll?
- 2:17 PM Ticket #1346 (TestAnyToAny is not executed from TestAll) created by
- It should be!
- 2:07 PM Changeset [5021] by
- References #1340: Implement AnyToAny?.deleteStrayLinks() The method …
- 1:43 PM Changeset [5020] by
- References #1279 A bioassay set's anyToany links are now being set as …
- 9:37 AM Changeset [5019] by
- References #1337: Complete the code example in JepRestrictionFunction? …
- 9:36 AM Changeset [5018] by
- Fixes #1337: Complete the code example in JepRestrictionFunction?
- 9:36 AM Ticket #1337 (Complete the code example in JepRestrictionFunction) closed by
- fixed: (In [5018]) Fixes #1337: Complete the code example in …
- 9:18 AM Ticket #1293 (Changing name of the 'File' entry in the top toolbar to 'BASE') closed by
- fixed: (In [5017]) Fixes #1293: Changing name of the 'File' entry in the top …
- 9:17 AM Changeset [5017] by
- Fixes #1293: Changing name of the 'File' entry in the top toolbar to 'BASE'
- 8:21 AM Changeset [5016] by
- Fixes #1320: Complete the implementation of SessionControl?.reloadSettings()
- 8:21 AM Ticket #1320 (Complete the implementation of SessionControl.reloadSettings()) closed by
- fixed: (In [5016]) Fixes #1320: Complete the implementation of …
- 8:06 AM Ticket #1336 (Remove "Installing job agents" progress report from Install.java) closed by
- fixed: (In [5015]) Fixes #1336: Remove "Installing job agents" progress …
- 8:06 AM Changeset [5015] by
- Fixes #1336: Remove "Installing job agents" progress report from …
Jun 25, 2009:
- 3:11 PM Changeset [5014] by
- Fixes #1328 Remove all or most 'continue' statements from the code. …
- 3:11 PM Ticket #1328 (Remove all or most 'continue' statements from the code) closed by
- fixed: (In [5014]) Fixes #1328 Remove all or most 'continue' statements from …
- 1:33 PM Ticket #1345 (JarClassLoader should have the possibility to load classes in it's own ...) closed by
- fixed: (In [5013]) Fixes #1345: JarClassLoader? should have the possibility to …
- 1:33 PM Changeset [5013] by
- Fixes #1345: JarClassLoader? should have the possibility to load …
- 9:11 AM Ticket #1345 (JarClassLoader should have the possibility to load classes in it's own ...) created by
-
With the current implementation of
JarClassLoaderthe parent class …
Jun 24, 2009:
- 1:52 PM Changeset [5012] by
- Fixes #1338: Implement the ExtensionsFile?.unregisterMissing() method
- 1:52 PM Ticket #1338 (Implement the ExtensionsFile.unregisterMissing() method) closed by
- fixed: (In [5012]) Fixes #1338: Implement the …
- 8:19 AM Changeset [5011] by
- Fixes #1341: Implement DiskUsage?.getUsingItems()
- 8:19 AM Ticket #1341 (Implement DiskUsage.getUsingItems()) closed by
- fixed: (In [5011]) Fixes #1341: Implement DiskUsage?.getUsingItems()
Jun 23, 2009:
- 2:44 PM Changeset [5010] by
- Fixes #1209: "Share new files and sub- directories automatically" …
- 2:44 PM Ticket #1209 ("Share new files and sub- directories automatically" should have a ...) closed by
- fixed: (In [5010]) Fixes #1209: "Share new files and sub- directories …
- 12:53 PM Ticket #1324 (Check TODO markers in the BASE code) closed by
- fixed: All TODO markers have been removed and replaced with new tickets.
- 12:52 PM Changeset [5009] by
- References #1324, #1344: Check TODO markers in the BASE code
- 12:51 PM Ticket #1344 (Implement functionality for getting cpu and memory usage on a job agent) created by
- Part of #1324. But this may be hard to do since it seems to be …
- 12:50 PM Changeset [5008] by
- References #1324, #1337: Check TODO markers in the BASE code
- 12:49 PM Changeset [5007] by
- References #1324, #1339: Check TODO markers in the BASE code
- 12:48 PM Changeset [5006] by
- References #1324, #1338: Check TODO markers in the BASE code
- 12:47 PM Changeset [5005] by
- References #1324, #1320: Check TODO markers in the BASE code
- 12:46 PM Changeset [5004] by
- References #1324, #1341: Check TODO markers in the BASE code
- 12:45 PM Changeset [5003] by
- References #1324: Check TODO markers in the BASE code I guess we'll …
- 12:06 PM Changeset [5002] by
- References #1324: Check TODO markers in the BASE code It is unclear …
- 12:00 PM Changeset [5001] by
- References #1324: Check TODO markers in the BASE code Seems to work.
- 12:00 PM Changeset [5000] by
- References #1324: Check TODO markers in the BASE code There are no …
- 11:59 AM Changeset [4999] by
- References #1324: Check TODO markers in the BASE code Plug-in …
- 11:58 AM Changeset [4998] by
- References #1324: Check TODO markers in the BASE code Better …
- 11:56 AM Changeset [4997] by
- References #1324: Check TODO markers in the BASE code Mapping is only …
- 11:54 AM Changeset [4996] by
- References #1324, #1340: Check TODO markers in the BASE code
- 11:53 AM Changeset [4995] by
- References #1324, #1342: Check TODO markers in the BASE code
- 11:51 AM Changeset [4994] by
- References #1324, #1336: Check TODO markers in the BASE code
- 11:50 AM Changeset [4993] by
- References #1324, #1343: Check TODO markers in the BASE code
- 11:49 AM Ticket #1343 (Redesign Metadata.getPropertyValue()) created by
- Part of #1324. The code in the mentioned method is not pretty and it …
- 11:47 AM Changeset [4992] by
- References #1324: Check TODO markers in the BASE code We have made it …
- 11:45 AM Changeset [4991] by
- References #1324: Check TODO markers in the BASE code Don't see any …
- 11:43 AM Changeset [4990] by
- References #1324: Check TODO markers in the BASE code Seems like we …
- 11:43 AM Ticket #1342 (Fix message sending in InternalStorageController) created by
- Part of #1324. The current implementation seems to send one message …
- 11:34 AM Changeset [4989] by
- References #1324: Check TODO markers in the BASE code There are no …
- 11:33 AM Ticket #1341 (Implement DiskUsage.getUsingItems()) created by
- Part of #1324.
- 11:31 AM Changeset [4988] by
- References #1324: Check TODO markers in the BASE code Seems like we …
- 11:30 AM Changeset [4987] by
- References #1324: Check TODO markers in the BASE code The existing …
- 11:28 AM Changeset [4986] by
- References #1324: Check TODO markers in the BASE code Seems like we …
- 11:27 AM Changeset [4985] by
- References #1324: Check TODO markers in the BASE code Better …
- 11:24 AM Ticket #1340 (Implement AnyToAny.deleteStrayLinks()) created by
- Part of #1324. When the method has been implemented, make sure that …
- 11:21 AM Ticket #1339 (Implement the net.sf.basedb.util.Tree.equals() method) created by
- Part of #1324. The current equals() method only compare instances, a …
- 11:19 AM Ticket #1338 (Implement the ExtensionsFile.unregisterMissing() method) created by
- Part of #1324. This method currently does nothing and may result in …
- 11:17 AM Changeset [4984] by
- References #1324: Check TODO markers in the BASE code Documented the …
- 11:07 AM Changeset [4983] by
- References #1324: Check TODO markers in the BASE code No global …
- 11:06 AM Changeset [4982] by
- References #1324: Check TODO markers in the BASE code We will …
- 11:05 AM Changeset [4981] by
- References #1324: Check TODO markers in the BASE code Removed …
- 11:02 AM Changeset [4980] by
- References #1324: Check TODO markers in the BASE code Removed a …
- 11:01 AM Changeset [4979] by
- References #1324: Check TODO markers in the BASE code Documented …
- 10:58 AM Ticket #1337 (Complete the code example in JepRestrictionFunction) created by
- Part of #1324.
- 10:56 AM Ticket #1336 (Remove "Installing job agents" progress report from Install.java) created by
- Part of #1324. Job agent installation is not done by the regular …
- 10:44 AM Changeset [4978] by
- Fixes #1335: Add support for exporting experimental factors from …
- 10:44 AM Ticket #1335 (Add support for exporting experimental factors from bioassays list) closed by
- fixed: (In [4978]) Fixes #1335: Add support for exporting experimental …
- 8:57 AM Ticket #1322 (StaticCache.cleanUp() should remove empty directories) closed by
- fixed: (In [4977]) Fixes #1322: StaticCache?.cleanUp() should remove empty …
- 8:57 AM Changeset [4977] by
- Fixes #1322: StaticCache?.cleanUp() should remove empty directories
Jun 18, 2009:
- 2:04 PM Changeset [4976] by
- Fixes #1321: Add exists() and size() to StaticCache? And also added a …
- 2:04 PM Ticket #1321 (Add exists() and size() to StaticCache) closed by
- fixed: (In [4976]) Fixes #1321: Add exists() and size() to StaticCache? And …
Jun 17, 2009:
- 11:40 AM Ticket #1188 (Create a super batch importer?) closed by
- wontfix: It is difficult to run plug-ins from other plug-ins so this is a won't fix.
Jun 15, 2009:
- 12:30 PM Changeset [4975] by
- Fixes #1333: Alternate triggering of servlets in extensions
- 12:30 PM Ticket #1333 (Alternate triggering of servlets in extensions) closed by
- fixed: (In [4975]) Fixes #1333: Alternate triggering of servlets in extensions
- 11:05 AM Changeset [4974] by
- Merged patch release 2.12.1 to the trunk.
- 10:53 AM Milestone BASE 2.12.1 completed
- Bug fixes for 2.12. Revision Log: log:branches/2.12-stable@4955:4972
- 10:52 AM DownloadPage edited by
- Releasing BASE 2.12.1 (diff)
- 10:00 AM Changeset [4973] by
- Changes for future release 2.12.2
- 9:47 AM Changeset [4972] by
- Tagging version 2.12.1
- 9:47 AM Changeset [4971] by
- Preparing release 2.12.1
- 8:37 AM Ticket #1335 (Add support for exporting experimental factors from bioassays list) created by
- See #1334 for background info. It should be possible to do this with a …
- 8:27 AM Changeset [4970] by
- Fixes #1334: Unable to resolve property: $rba when exporting …
- 8:22 AM Ticket #1334 (Unable to resolve property: $rba when exporting experimatal factors ...) closed by
- fixed: (In [4969]) Fixes #1334: Unable to resolve property: $rba when …
- 8:22 AM Changeset [4969] by
- Fixes #1334: Unable to resolve property: $rba when exporting …
- 8:20 AM Ticket #1334 (Unable to resolve property: $rba when exporting experimatal factors ...) created by
- To reproduce this an experiment with at least one experimental factor …
Jun 12, 2009:
- 2:16 PM Ticket #1333 (Alternate triggering of servlets in extensions) created by
- Currently, '*.servlet' is used as a triggering pattern for servlets in …
Jun 11, 2009:
- 3:32 PM Changeset [4968] by
- Fixes #1332: TableWriter?.tablePrintData() doesn't handle null values …
- 3:32 PM Ticket #1332 (TableWriter.tablePrintData() doesn't handle null values correctly) closed by
- fixed: (In [4968]) Fixes #1332: TableWriter?.tablePrintData() doesn't handle …
- 2:18 PM Ticket #1332 (TableWriter.tablePrintData() doesn't handle null values correctly) created by
- The problematic line is: […] which either prints the value of 'd' …
Jun 10, 2009:
- 8:53 AM Changeset [4967] by
- References #1330: Add support function in JavaScript? for parsing AJAX …
Jun 9, 2009:
- 10:44 AM Changeset [4966] by
- References #1330: Add support function in JavaScript? for parsing AJAX …
- 10:43 AM Ticket #1331 (BaseFileWriter doesn't escape newline and carrige return as expected) closed by
- fixed: (In [4965]) Fixes #1331: BaseFileWriter? doesn't escape newline and …
- 10:43 AM Changeset [4965] by
- Fixes #1331: BaseFileWriter? doesn't escape newline and carrige return …
- 10:41 AM Ticket #1331 (BaseFileWriter doesn't escape newline and carrige return as expected) created by
- The documentation promises to replace newline and carrige return with …
- 9:20 AM Changeset [4964] by
- References #1330: Add support function in JavaScript? for parsing AJAX …
Jun 8, 2009:
- 12:09 PM Ticket #1330 (Add support function in JavaScript for parsing AJAX responses) created by
- The GenePattern integration is going to use a lot of Ajax calls to get …
- 11:56 AM Changeset [4963] by
- References #1329: A plug-in should be able to use a JSP page from an …
- 11:45 AM Changeset [4962] by
- Fixes #1329: A plug-in should be able to use a JSP page from an …
- 11:45 AM Ticket #1329 (A plug-in should be able to use a JSP page from an extension for ...) closed by
- fixed: (In [4962]) Fixes #1329: A plug-in should be able to use a JSP page …
- 8:30 AM GenePattern created by
- 8:27 AM Ticket #1329 (A plug-in should be able to use a JSP page from an extension for ...) created by
- A plug-in may currently use a custom JSP page for parameter input. The …
Jun 5, 2009:
- 1:02 PM Changeset [4961] by
- Fixes #1327: BaseFileExporter? creates two parameter sections if the …
- 1:02 PM Ticket #1327 (BaseFileExporter creates two parameter sections if the first plug-in ...) closed by
- fixed: (In [4961]) Fixes #1327: BaseFileExporter? creates two parameter …
- 12:59 PM Ticket #1328 (Remove all or most 'continue' statements from the code) created by
- The 'continue' statement is dangerous. It is very easy to miss that …
- 12:05 PM Ticket #1327 (BaseFileExporter creates two parameter sections if the first plug-in ...) created by
- For example: If a BASE1 plug-in defines the first parameter as: …
- 10:57 AM Changeset [4960] by
- Fixes #1326: Base1PluginExecuter doesn't recognise 'intensityX' spot …
- 10:57 AM Ticket #1326 (Base1PluginExecuter doesn't recognise 'intensityX' spot field if ...) closed by
- fixed: (In [4960]) Fixes #1326: Base1PluginExecuter doesn't recognise …
- 10:55 AM Ticket #1326 (Base1PluginExecuter doesn't recognise 'intensityX' spot field if ...) created by
- BASE 1 plug-ins should be allowed to specify 'intensity1', …
Jun 4, 2009:
- 1:00 PM Ticket #1325 (Lists of items (similar funcion as biomaterial lists)) created by
- Starting to work with biomaterials and biomaterial lists makes us …
- 12:56 PM Changeset [4959] by
- Fixes #1323: ExtensionsControl?.init() doesn't remember the …
- 12:56 PM Ticket #1323 (ExtensionsControl.init() doesn't remember the ServletContext parameter) closed by
- fixed: (In [4959]) Fixes #1323: ExtensionsControl?.init() doesn't remember the …
- 12:47 PM Ticket #1324 (Check TODO markers in the BASE code) created by
- There are many places in the BASE code that has been marked with …
- 11:49 AM Ticket #1323 (ExtensionsControl.init() doesn't remember the ServletContext parameter) created by
-
This may lead to
NullPointerExceptionin any servlet that calls … - 8:58 AM Ticket #1322 (StaticCache.cleanUp() should remove empty directories) created by
- The static cache is leaving empty directories behind when old cache …
- 8:56 AM Ticket #1321 (Add exists() and size() to StaticCache) created by
-
The
exists()method should return a boolean indicating if a cache … - 8:54 AM Ticket #1320 (Complete the implementation of SessionControl.reloadSettings()) created by
- This method has an option to save current user-specific settings …
Jun 1, 2009:
- 8:35 AM Changeset [4958] by
- Fixes #1319: JEP intensity transformer dialogue complains if …
- 8:35 AM Ticket #1319 (JEP intensity transformer dialogue complains if 'Resulting transform' ...) closed by
- fixed: (In [4958]) Fixes #1319: JEP intensity transformer dialogue complains …
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