Timeline
Nov 12, 2009:
- 2:20 PM Ticket #1434 (Fix display issue with empty table cells in Internet explorer) closed by
- fixed: (In [5190]) Fixes #1434: Fix display issue with empty table cells in …
- 2:19 PM Changeset [5190] by
- Fixes #1434: Fix display issue with empty table cells in Internet explorer
- 2:04 PM Ticket #1434 (Fix display issue with empty table cells in Internet explorer) created by
- Another annoying issue is that Internet explorer doesn't display …
Nov 11, 2009:
- 2:21 PM Changeset [5189] by
- Fixes #1433: Fix display issues with 'multioptions' filter Replaces …
- 2:21 PM Ticket #1433 (Fix display issues with 'multioptions' filter) closed by
- fixed: (In [5189]) Fixes #1433: Fix display issues with 'multioptions' filter …
- 12:11 PM Ticket #1433 (Fix display issues with 'multioptions' filter) created by
- This is an issue that has been annoying me for some time. It seems to …
Nov 10, 2009:
- 12:28 PM Ticket #1426 (Problem viewing/downloading file with special characters in ...) closed by
- invalid: Seems like it was a configuration issue when Tomcat + Apache both …
- 12:25 PM Ticket #1432 (TableWriter should provide support for escaping data) closed by
- fixed: The support that was added to the TableWriter? class can be useful later on.
Nov 9, 2009:
- 10:30 PM Changeset [5188] by
- References #1432: TableWriter? and related classes should provide …
Nov 6, 2009:
- 2:34 PM Ticket #1432 (TableWriter should provide support for escaping data) created by
-
The
TableWriterclass is, for example, used by when creating … - 11:12 AM Changeset [5187] by
- References #1422: More user-configurable job parameters for …
- 9:39 AM Ticket #1397 (Function to inherit annotations for all experimental factors in the ...) closed by
- fixed: (In [5186]) Fixes #1397: Function to inherit annotations for all …
- 9:39 AM Changeset [5186] by
- Fixes #1397: Function to inherit annotations for all experimental …
Nov 5, 2009:
- 10:45 AM Ticket #1431 (Describe extra values. What are they? How are they created?) created by
- 10:40 AM Changeset [5185] by
- Merged patch release 2.14.1 to the trunk
- 9:33 AM Milestone BASE 2.14.1 completed
- Bug fixes for 2.14. Revision Log: log:branches/2.14-stable@5154:5183
- 9:31 AM DownloadPage edited by
- Releasing 2.14.1 (diff)
- 9:28 AM Changeset [5184] by
- Changes for future release 2.14.2
- 9:18 AM Changeset [5183] by
- Tagging version 2.14.1
- 9:17 AM Changeset [5182] by
- Preparing release 2.14.1
- 9:16 AM Changeset [5181] by
- References #1416: Base1PluginExecuter doesn't set the plug-in …
Nov 4, 2009:
- 2:32 PM Changeset [5180] by
- Fixes #1430: Removing an annotation from an item may cause "Item not …
- 2:32 PM Ticket #1430 (Removing an annotation from an item may cause "Item not found" error ...) closed by
- fixed: (In [5180]) Fixes #1430: Removing an annotation from an item may cause …
- 2:10 PM Ticket #1430 (Removing an annotation from an item may cause "Item not found" error ...) created by
- This requires several steps to reproduce. 1. Create two items, one …
- 1:04 PM Changeset [5179] by
- Fixes #1414: Search function that searches all directories for a …
- 1:04 PM Ticket #1414 (Search function that searches all directories for a file/directory) closed by
- fixed: (In [5179]) Fixes #1414: Search function that searches all directories …
- 10:01 AM Ticket #1429 (Document BASEfile exporter plug-in) created by
- Maybe we should explain the consequences of what happens when average …
Nov 3, 2009:
Nov 2, 2009:
- 3:55 PM Ticket #1428 (Write "Formulas" section) created by
- The Formulas dialogue is not described in the reference manual.
- 3:47 PM Changeset [5178] by
- Restructured Base1PluginExecuter configuration and BASE1 plug-in …
- 10:52 AM Changeset [5177] by
- Fixes #1427: Raw data type lookup by name in rawbioassay batch importer
- 10:52 AM Ticket #1427 (Raw data type lookup by name in rawbioassay batch importer) closed by
- fixed: (In [5177]) Fixes #1427: Raw data type lookup by name in rawbioassay …
Oct 30, 2009:
- 8:09 PM Ticket #1398 (File tree filter) closed by
- wontfix: I think #1413 solves the issue more in a better way. It is a lot …
- 5:53 PM Ticket #1398 (File tree filter) reopened by
- Replying to nicklas: > Wouldn't this just move the problem …
- 5:46 PM Ticket #1427 (Raw data type lookup by name in rawbioassay batch importer) created by
- Plugin batchimporting rawbioassays is using raw data type ID to find …
- 5:40 PM Ticket #1426 (Problem viewing/downloading file with special characters in ...) created by
- It is possible to create folder with '+' in the name. When trying to …
- 11:25 AM Changeset [5176] by
- References #1397: Function to inherit annotations for all experimental …
- 8:40 AM Changeset [5175] by
- Removing unused imports.
- 8:39 AM Changeset [5174] by
- Fixes #1425: Cached experiment explorer information should be …
- 8:39 AM Ticket #1425 (Cached experiment explorer information should be distributed into ...) closed by
- fixed: (In [5174]) Fixes #1425: Cached experiment explorer information should …
- 8:33 AM Ticket #1425 (Cached experiment explorer information should be distributed into ...) created by
- This is the same as #1423, but for the data that is cached by the …
- 8:32 AM Changeset [5173] by
- Fixes #1424: Cached plots should be distributed into subdirectories
- 8:32 AM Ticket #1424 (Cached plots should be distributed into subdirectories) closed by
- fixed: (In [5173]) Fixes #1424: Cached plots should be distributed into …
- 8:20 AM Ticket #1424 (Cached plots should be distributed into subdirectories) created by
- This is the same as #1423, but for the overview plots that are cached …
- 8:19 AM Changeset [5172] by
- Fixes #1423: Cached annotations should be distributed into subdirectories
- 8:19 AM Ticket #1423 (Cached annotations should be distributed into subdirectories) closed by
- fixed: (In [5172]) Fixes #1423: Cached annotations should be distributed into …
- 7:56 AM Ticket #1423 (Cached annotations should be distributed into subdirectories) created by
- The annotation cache implemented in #1374 saves the data in files in …
Oct 29, 2009:
- 2:19 PM Changeset [5171] by
- Fixes #1422: More user-configurable job parameters for Base1PluginExecuter
- 2:19 PM Ticket #1422 (More user-configurable job parameters for Base1PluginExecuter) closed by
- fixed: (In [5171]) Fixes #1422: More user-configurable job parameters for …
- 12:47 PM Ticket #1422 (More user-configurable job parameters for Base1PluginExecuter) created by
- While working with #1376 and #1378 I noticed that testing the …
- 12:39 PM Changeset [5170] by
- Fixes #1378: Base1PluginExecuter should link the result directory with …
- 12:39 PM Ticket #1378 (Base1PluginExecuter should link the result directory with the ...) closed by
- fixed: (In [5170]) Fixes #1378: Base1PluginExecuter should link the result …
- 12:15 PM Changeset [5169] by
- Fixes #1376: Remove the working directory (in the BASE file system) …
- 12:15 PM Ticket #1376 (Remove the working directory (in the BASE file system) that ...) closed by
- fixed: (In [5169]) Fixes #1376: Remove the working directory (in the BASE …
- 11:02 AM Changeset [5168] by
- Fixes #1421: Filter on the 'name', 'description' and other columns in …
- 11:02 AM Ticket #1421 (Filter on the 'name', 'description' and other columns in "Project ...) closed by
- fixed: (In [5168]) Fixes #1421: Filter on the 'name', 'description' and other …
Oct 28, 2009:
- 2:18 PM Ticket #1421 (Filter on the 'name', 'description' and other columns in "Project ...) created by
- This should now be possible building on the work done in #1377 --> …
- 2:16 PM Changeset [5167] by
- Fixes #1377: Filter item lists on the 'Shared to' column The "Project …
- 2:16 PM Ticket #1377 (Filter item lists on the 'Shared to' column) closed by
- fixed: (In [5167]) Fixes #1377: Filter item lists on the 'Shared to' column …
- 2:07 PM Changeset [5166] by
- Removed branch that was never used.
- 11:04 AM Changeset [5165] by
- References #1377: Filter item lists on the 'Shared to' column All …
Oct 27, 2009:
- 2:37 PM Changeset [5164] by
- References #1377: Filter item lists on the 'Shared to' column The …
- 10:06 AM Ticket #1420 (Round values imported using Manual transform) created by
- When using Manual transform to import spot data (Ch 1 values) …
Oct 26, 2009:
- 10:59 AM Changeset [5163] by
- Fixes #1418: List of inherited annotations may include annotations …
- 10:59 AM Ticket #1418 (List of inherited annotations may include annotations that are not ...) closed by
- fixed: (In [5163]) Fixes #1418: List of inherited annotations may include …
- 8:23 AM Ticket #1419 (Missing query, SET_INTENSITYTRANSFORM_ON_BIOASSAYSETS, in ...) closed by
- fixed: (In [5162]) Fixes #1419: Missing query, …
- 8:23 AM Changeset [5162] by
- Fixes #1419: Missing query, SET_INTENSITYTRANSFORM_ON_BIOASSAYSETS, in …
- 8:14 AM Ticket #1419 (Missing query, SET_INTENSITYTRANSFORM_ON_BIOASSAYSETS, in ...) created by
- This query is needed to update from BASE 2.11 to BASE 2.12 and was …
Oct 23, 2009:
- 4:40 PM Ticket #1418 (List of inherited annotations may include annotations that are not ...) created by
- I have two different symptoms on the problem. The problem is found in …
- 1:48 PM Changeset [5161] by
- Fixes #1417: SessionControl?.updateLastAccess() should not check if it …
- 1:48 PM Ticket #1417 (SessionControl.updateLastAccess() should not check if it is closed or not) closed by
- fixed: (In [5161]) Fixes #1417: SessionControl?.updateLastAccess() should not …
- 1:47 PM Ticket #1417 (SessionControl.updateLastAccess() should not check if it is closed or not) created by
- This can result in some cleanup issues. Eg. calling logout() should …
- 1:44 PM Ticket #1416 (Base1PluginExecuter doesn't set the plug-in configuration description ...) closed by
- fixed: (In [5160]) Fixes #1416: Base1PluginExecuter doesn't set the plug-in …
- 1:44 PM Changeset [5160] by
- Fixes #1416: Base1PluginExecuter doesn't set the plug-in configuration …
- 1:25 PM Ticket #1405 (Use 'description' as help text for job parameters if the plug-in ...) closed by
- fixed: (In [5159]) Fixes #1405: Use 'description' as help text for job …
- 1:25 PM Changeset [5159] by
- Fixes #1405: Use 'description' as help text for job parameters if the …
- 12:58 PM Ticket #1416 (Base1PluginExecuter doesn't set the plug-in configuration description ...) created by
- When a BASE 1 plug-in is configured with the help of a plug-in …
- 11:33 AM Changeset [5158] by
- Fixes #1413: Make the directory icon clickable in the Files and …
- 11:33 AM Ticket #1413 (Make the directory icon clickable in the Files and directories view) closed by
- fixed: (In [5158]) Fixes #1413: Make the directory icon clickable in the …
- 11:28 AM Changeset [5157] by
- Fixes #1415: Lazy directory loading doesn't work with Internet Explorer
- 11:28 AM Ticket #1415 (Lazy directory loading doesn't work with Internet Explorer) closed by
- fixed: (In [5157]) Fixes #1415: Lazy directory loading doesn't work with …
- 10:47 AM Ticket #1415 (Lazy directory loading doesn't work with Internet Explorer) created by
- Using Internet explorer 8. 1. Go to View -> Files. 2. Try expand …
Oct 22, 2009:
- 5:36 PM Ticket #1414 (Search function that searches all directories for a file/directory) created by
- If you are looking for a file but doesn't know in which directory it …
- 3:24 PM Ticket #1398 (File tree filter) closed by
- wontfix: Replaced by #1413 which is probably a better solution.
- 3:22 PM Ticket #1413 (Make the directory icon clickable in the Files and directories view) created by
- When the icon is clicked, the same thing should happen as if the user …
- 1:45 PM Ticket #1349 (Select button does not work in IE7.0 + XP Home SP3) closed by
- worksforme
- 9:10 AM Milestone BASE 2.14 completed
- The main feature of this release: * Major performance enhancements …
- 9:09 AM Changeset [5156] by
- Merged pre-2.14-releases to the trunk
- 8:52 AM DownloadPage edited by
- Releasing 2.14 (diff)
- 8:40 AM Changeset [5155] by
- Changes for future release 2.14.1
- 8:29 AM Changeset [5154] by
- Tagging version 2.14
- 8:28 AM Changeset [5153] by
- Preparing release 2.14
Oct 21, 2009:
- 2:39 PM Ticket #1412 (The selected unit for an annotation type should not be remembered when ...) closed by
- fixed: (In [5152]) Fixes #1412: The selected unit for an annotation type …
- 2:39 PM Changeset [5152] by
- Fixes #1412: The selected unit for an annotation type should not be …
- 9:46 AM Ticket #1412 (The selected unit for an annotation type should not be remembered when ...) created by
- To reproduce: 1. Create a numerical annotation type. Select any …
Oct 20, 2009:
- 2:51 PM Changeset [5151] by
- Changes for future release 2.15
- 2:50 PM Changeset [5150] by
- Forking new minor version 2.14 branch
- 2:49 PM Ticket #1386 (Plot function in the bioassay table in experiment explorer) closed by
- fixed: (In [5149]) Fixes #1386: Plot function in the bioassay table in …
- 2:49 PM Changeset [5149] by
- Fixes #1386: Plot function in the bioassay table in experiment …
- 2:35 PM Changeset [5148] by
- Fixes #1410 Sort problem in EExplorer when Avg
- 2:35 PM Ticket #1410 (Sort problem in EExplorer when Avg) closed by
- fixed: (In [5148]) Fixes #1410 Sort problem in EExplorer when Avg
- 12:33 PM Changeset [5147] by
- Fixes #1389: Cache annotation summary groups in experiment explorer …
- 12:33 PM Ticket #1389 (Cache annotation summary groups in experiment explorer) closed by
- fixed: (In [5147]) Fixes #1389: Cache annotation summary groups in experiment …
- 10:26 AM Changeset [5146] by
- Fixes #1411: Test programs must empty the static cache before running
- 10:26 AM Ticket #1411 (Test programs must empty the static cache before running) closed by
- fixed: (In [5146]) Fixes #1411: Test programs must empty the static cache …
- 8:50 AM Changeset [5145] by
- Fixes #1404: Use cached annotations in "item overview" The tests in …
- 8:50 AM Ticket #1404 (Use cached annotations in "item overview") closed by
- fixed: (In [5145]) Fixes #1404: Use cached annotations in "item overview" …
- 8:21 AM Changeset [5144] by
- Fixes #1406: Add a protocol parameter in the 'roles' test case Added …
- 8:21 AM Ticket #1406 (Add a protocol parameter in the 'roles' test case) closed by
- fixed: (In [5144]) Fixes #1406: Add a protocol parameter in the 'roles' test …
- 7:51 AM Ticket #1389 (Cache annotation summary groups in experiment explorer) reopened by
- See comment 19+ in ticket 1374
Oct 19, 2009:
- 3:32 PM Ticket #1411 (Test programs must empty the static cache before running) created by
- If old data from previous executions is still in the cache, the test …
- 2:54 PM Ticket #1410 (Sort problem in EExplorer when Avg) created by
- Noticed that sorting of the bioassay table in EExplorer doesn't work …
- 1:32 PM Changeset [5143] by
- References #1404: Use cached annotations in "item overview" Fixes a …
- 11:34 AM Ticket #1385 (Plot function in the annotation summary table in experiment explorer) closed by
- fixed: Everything seems to be ok now.
- 9:42 AM Ticket #1409 (Annotation summary table displays NaNs) closed by
- worksforme: Works for me now as of trunk revision 5142
- 9:11 AM Changeset [5142] by
- References #1385 and #1386. Plot functions in experiment explorer The …
- 9:03 AM Changeset [5141] by
- References #1386: Plot function in the bioassay table in experiment …
- 8:25 AM Changeset [5140] by
- References #1384: Move the annotation summary information table in …
- 8:22 AM Changeset [5139] by
- References #1388: Display the count for each group in the annotation …
Oct 16, 2009:
- 4:57 PM Ticket #1408 (Cannot deselect annotation in the annoation summary drop down) closed by
- worksforme: I can.
- 4:54 PM Ticket #1407 (Functionality of the "No labels" selection in plot function in the ...) closed by
- wontfix: It is not possible. The only way to know the coordinates were to put …
- 3:58 PM Ticket #1409 (Annotation summary table displays NaNs) created by
- The screen dump shows the problem.
- 3:47 PM Ticket #1408 (Cannot deselect annotation in the annoation summary drop down) created by
- Related to ticket:1383 After selecting one annotation (out of one …
- 3:43 PM Ticket #1407 (Functionality of the "No labels" selection in plot function in the ...) created by
- Related to ticket:1386 Checking the No labels box removes all labels …
- 2:39 PM Ticket #1406 (Add a protocol parameter in the 'roles' test case) created by
- To get some more automatic testing for the 'item overview' …
- 2:27 PM Changeset [5138] by
- References #1385 and #1386. Plot functions in experiment explorer …
Oct 15, 2009:
- 9:42 AM Changeset [5137] by
- References #1383: Make it possible to select more than one annotation …
- 8:33 AM Changeset [5136] by
- Merged patch release 2.13.1 to the trunk.
- 8:18 AM Milestone BASE 2.13.1 completed
- Bug fixes for 2.13. Revision Log: log:branches/2.13-stable@5089:5134
- 8:17 AM DownloadPage edited by
- Releasing BASE 2.13.1 (diff)
- 8:13 AM Changeset [5135] by
- Changes for future release 2.13.2
- 8:02 AM Changeset [5134] by
- Tagging version 2.13.1
- 8:01 AM Changeset [5133] by
- Preparing release 2.13.1 and fixed some incorrect javadoc links.
Oct 14, 2009:
- 1:55 PM Changeset [5132] by
- References #1404: Use cached annotations in "item overview" This …
- 9:44 AM Changeset [5131] by
- References #1374 and #1403: Caching of annotations, etc... Made some …
Oct 13, 2009:
- 2:17 PM Ticket #1405 (Use 'description' as help text for job parameters if the plug-in ...) created by
- The 'Run analysis plugin' pop-up dialogue can contain a useful plugin …
- 12:44 PM Changeset [5130] by
- Fixes #1403: Use cached annotations in experiment explorer, plot …
- 12:44 PM Ticket #1403 (Use cached annotations in experiment explorer, plot function, BASEfile ...) closed by
- fixed: (In [5130]) Fixes #1403: Use cached annotations in experiment …
- 11:11 AM WikiStart edited by
- Updated how to cite information. (diff)
- 8:49 AM Ticket #1400 (Store the item id together with annotation sets) closed by
- fixed: (In [5129]) Fixes #1400: Store the item id together with annotation …
- 8:49 AM Changeset [5129] by
- Fixes #1400: Store the item id together with annotation sets More …
- 8:29 AM Changeset [5128] by
- Fixes #1374: Caching of experimental factors Removed timing code.
- 8:29 AM Ticket #1374 (Caching of experimental factors) closed by
- fixed: (In [5128]) Fixes #1374: Caching of experimental factors Removed …
- 8:26 AM Ticket #1404 (Use cached annotations in "item overview") created by
- Caching was fixed in #1374. It seems to be a major performance enhancement.
- 8:25 AM Ticket #1403 (Use cached annotations in experiment explorer, plot function, BASEfile ...) created by
- Caching was fixed in #1374. It seems to be a major performance enhancement.
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