1 | <?xml version="1.0" encoding="UTF-8"?> |
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2 | <project |
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3 | name="GenePattern" |
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4 | default="jar" |
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5 | basedir="."> |
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6 | |
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7 | <!--create this file if you need to override values from properties below --> |
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8 | <property file="build.properties" /> |
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9 | |
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10 | <!-- variables used --> |
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11 | <property name="name" value="gp-integration" /> |
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12 | <property name="version" value="1.0pre" /> |
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13 | <property name="src" location="src" description="Location of source files" /> |
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14 | <property name="build" location="build" description="Location of compiled files" /> |
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15 | <property name="jar.name" value="${name}.jar" |
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16 | description="Name of JAR file with the extensions." /> |
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17 | <property name="tar.prefix" value="${name}-${version}" |
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18 | description="Prefix of .tar.gz file for download." /> |
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19 | <property name="tar.name" value="${tar.prefix}.tar.gz" |
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20 | description="Full name of .tar.gz file for download." /> |
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21 | <property name="javac.arg" value="-Xlint:unchecked" /> |
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22 | <property name="javac.source" value="1.5" /> |
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23 | <property name="javac.target" value="1.5" /> |
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24 | <property name="javac.encoding" value="UTF-8" /> |
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25 | <property name="depend.jars" value="http://base2.thep.lu.se/base/jars/2.12.0" /> |
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26 | |
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27 | <!-- set up classpath for compiling --> |
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28 | <path id="classpath"> |
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29 | <fileset dir="lib"> |
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30 | <include name="**/*.jar" /> |
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31 | </fileset> |
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32 | </path> |
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33 | |
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34 | <target name="init"> |
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35 | <mkdir dir="${build}" /> |
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36 | </target> |
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37 | |
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38 | <target name="clean"> |
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39 | <delete failonerror="false" includeemptydirs="true"> |
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40 | <fileset dir="${build}" defaultexcludes="no" /> |
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41 | <fileset file="${jar.name}" /> |
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42 | <fileset file="${tar.name}" /> |
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43 | </delete> |
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44 | </target> |
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45 | |
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46 | <target |
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47 | name="package" |
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48 | depends="clean,jar" |
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49 | description="Clean and create binary distribution package" |
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50 | > |
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51 | <tar |
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52 | destfile="${tar.name}" |
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53 | longfile="gnu" |
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54 | compression="gzip" |
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55 | > |
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56 | <tarfileset |
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57 | dir="." |
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58 | prefix="${tar.prefix}" |
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59 | preserveLeadingSlashes="true" |
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60 | includes="${jar.name},README,LICENSE*" |
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61 | > |
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62 | </tarfileset> |
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63 | </tar> |
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64 | </target> |
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65 | |
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66 | <target |
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67 | name="jar" |
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68 | depends="build" |
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69 | description="Creates the extension JAR file" |
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70 | > |
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71 | <copy todir="${build}"> |
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72 | <fileset dir="." includes="META-INF/*" /> |
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73 | </copy> |
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74 | <!--replace token="%%plugins.jar%%" value="${jar.name}" file="${build}/META-INF/base-plugins.xml" /--> |
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75 | <jar |
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76 | jarfile="${jar.name}" |
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77 | > |
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78 | <fileset dir="${build}" /> |
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79 | <fileset dir="." includes="resources/**" /> |
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80 | </jar> |
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81 | </target> |
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82 | |
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83 | <target |
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84 | name="build" |
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85 | depends="init,checkjar" |
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86 | description="Compiles the plugin and put in jar" |
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87 | > |
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88 | <mkdir dir="${build}" /> |
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89 | <javac |
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90 | encoding="${javac.encoding}" |
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91 | srcdir="${src}" |
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92 | destdir="${build}" |
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93 | debug="true" |
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94 | classpathref="classpath" |
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95 | source="${javac.source}" |
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96 | target="${javac.target}" |
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97 | > |
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98 | <compilerarg value="${javac.arg}" /> |
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99 | </javac> |
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100 | </target> |
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101 | |
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102 | <target |
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103 | name="checkjar" |
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104 | description="Checks that the BASE2Core.jar, BASE2Webclient.jar, BASE2CorePlugins.jar and BASE2WSClient.jar exists." |
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105 | > |
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106 | <available classname="net.sf.basedb.util.export.spotdata.AbstractBioAssaySetExporter" |
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107 | classpathref="classpath" property="base2core" /> |
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108 | <available classname="net.sf.basedb.plugins.util.Parameters" |
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109 | classpathref="classpath" property="base2plugins" /> |
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110 | <available classname="net.sf.basedb.clients.web.extensions.toolbar.FixedButtonFactory" |
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111 | classpathref="classpath" property="base2web" /> |
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112 | <available classname="net.sf.basedb.info.BioAssaySetInfo" |
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113 | classpathref="classpath" property="base2webservice" /> |
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114 | <fail unless="base2core" message="Can't find BASE2Core.jar in ./lib/compile. Try 'ant download-lib' to download the missing file." /> |
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115 | <fail unless="base2plugins" message="Can't find BASE2CorePlugins.jar in ./lib/compile. Try 'ant download-lib' to download the missing file." /> |
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116 | <fail unless="base2web" message="Can't find BASE2Webclient.jar in ./lib/compile. Try 'ant download-lib' to download the missing file." /> |
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117 | <fail unless="base2webservice" message="Can't find BASE2WSClient.jar in ./lib/compile. Try 'ant download-lib' to download the missing file." /> |
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118 | <echo>Found BASE2Core.jar, BASE2CorePlugins.jar, BASE2Webclient.jar and BASE2WSClient.jar.</echo> |
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119 | </target> |
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120 | |
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121 | <target |
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122 | name="download-lib" |
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123 | description="Download BASE2Core.jar, BASE2Webclient.jar, BASE2CorePlugins.jar and BASE2WSClient.jar" |
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124 | > |
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125 | <echo> |
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126 | ------------------------------------------------------- |
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127 | NOTE! You may specifiy a different download location by |
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128 | creating the file './build.properties' and |
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129 | setting 'depend.jars' to the URL to download from. |
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130 | ------------------------------------------------------- |
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131 | </echo> |
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132 | <download-lib file="BASE2Core.jar" /> |
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133 | <download-lib file="BASE2CorePlugins.jar" /> |
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134 | <download-lib file="BASE2Webclient.jar" /> |
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135 | <download-lib file="BASE2WSClient.jar" /> |
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136 | </target> |
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137 | |
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138 | <macrodef name="download-lib" description="Download BASE core JAR files"> |
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139 | <attribute name="file" /> |
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140 | <sequential> |
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141 | <get |
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142 | dest="lib/compile/@{file}" |
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143 | src="${depend.jars}/@{file}" |
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144 | usetimestamp="true" |
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145 | verbose="true" |
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146 | ignoreerrors="true" |
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147 | /> |
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148 | </sequential> |
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149 | </macrodef> |
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150 | </project> |
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