source: extensions/net.sf.basedb.genepattern/trunk/resources/options.jsp @ 1108

Last change on this file since 1108 was 1108, checked in by Nicklas Nordborg, 14 years ago

Fixes #221: Configure GenePattern? server

The settings are now saved to the databas as user default settings.

  • Property svn:eol-style set to native
  • Property svn:keywords set to Date Id
File size: 4.6 KB
Line 
1<%-- $Id: options.jsp 1108 2009-06-04 07:18:10Z nicklas $
2  ------------------------------------------------------------------
3  Copyright (C) 2009 Nicklas Nordborg
4
5  This file is part of BASE - BioArray Software Environment.
6  Available at http://base.thep.lu.se/
7
8  BASE is free software; you can redistribute it and/or
9  modify it under the terms of the GNU General Public License
10  as published by the Free Software Foundation; either version 2
11  of the License, or (at your option) any later version.
12
13  BASE is distributed in the hope that it will be useful,
14  but WITHOUT ANY WARRANTY; without even the implied warranty of
15  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
16  GNU General Public License for more details.
17
18  You should have received a copy of the GNU General Public License
19  along with this program; if not, write to the Free Software
20  Foundation, Inc., 59 Temple Place - Suite 330,
21  Boston, MA  02111-1307, USA.
22  ------------------------------------------------------------------
23
24  @author Jari, Nicklas
25--%>
26<%@ page
27  pageEncoding="UTF-8"
28  session="false"
29  import="net.sf.basedb.core.Application"
30  import="net.sf.basedb.core.BioAssaySet"
31  import="net.sf.basedb.core.Experiment"
32  import="net.sf.basedb.core.Directory"
33  import="net.sf.basedb.core.User"
34  import="net.sf.basedb.core.DbControl"
35  import="net.sf.basedb.core.SessionControl"
36  import="net.sf.basedb.core.Path"
37  import="net.sf.basedb.core.Presets"
38  import="net.sf.basedb.core.Presets.Preset"
39  import="net.sf.basedb.clients.web.Base"
40  import="net.sf.basedb.clients.web.util.HTML"
41  import="net.sf.basedb.clients.web.extensions.ExtensionsControl"
42  import="net.sf.basedb.util.Values"
43%>
44<%@ taglib prefix="base" uri="/WEB-INF/base.tld" %>
45<%@ taglib prefix="t" uri="/WEB-INF/tab.tld" %>
46
47<%
48final SessionControl sc = Base.getExistingSessionControl(request, true);
49final String ID = sc.getId();
50final float scale = Base.getScale(sc);
51DbControl dc = null;
52try
53{
54  dc = sc.newDbControl();
55  final User user = User.getById(dc, sc.getLoggedInUserId());
56  String presetsXml = sc.getUserDefaultSetting("net.sf.basedb.genepattern.options");
57  Presets presets = new Presets();
58  if (presetsXml != null) presets.loadFrom(presetsXml);
59%>
60<base:page type="popup" title="<%="GenePattern options for "+HTML.encodeTags(user.getName())%>">
61<base:head scripts="tabcontrol.js" styles="tabcontrol.css">
62  <script language="JavaScript">
63  function saveSettings()
64  {
65    document.forms['options'].submit();
66  }
67  function addServer()
68  {
69    Main.openPopup('edit_server.jsp?ID=<%=ID%>&gpServer=', 'EditGPServer', 600, 400);
70  }
71  function editServer()
72  {
73    var frm = document.forms['options'];
74    if (frm.servers.selectedIndex < 0)
75    {
76      alert('No server has been selected');
77      return;
78    }
79    var gpServer = frm.servers[frm.servers.selectedIndex].text;
80    Main.openPopup('edit_server.jsp?ID=<%=ID%>&gpServer=' + encodeURIComponent(gpServer), 'EditGPServer', 600, 400);
81  }
82  function removeServer()
83  {
84    var frm = document.forms['options'];
85    if (frm.servers.selectedIndex < 0)
86    {
87      alert('No server has been selected');
88      return;
89    }
90    var gpServer = frm.servers[frm.servers.selectedIndex].text;
91    Main.openPopup('submit.jsp?ID=<%=ID%>&cmd=RemoveServer&gpServer=' + encodeURIComponent(gpServer), 'RemoveGPServer', 300, 200);
92  }
93  </script>
94</base:head>
95<base:body>
96  <form action="submit.jsp?ID=<%=ID%>" method="post" name="options" onsubmit="return false;">
97  <input type=hidden name="cmd" value="SaveOptions">
98 
99  <h3 class="docked">GenePattern options for <%=HTML.encodeTags(user.getName())%></h3>
100  <t:tabcontrol id="options" 
101    contentstyle="<%="height: "+(int)(scale*280)+"px;"%>" 
102    position="bottom">
103 
104  <t:tab id="option" title="GenePattern servers">
105    <table class="form" cellspacing=0>
106    <tr>
107      <td class="prompt">GenePattern servers</td>
108    <tr>
109      <td>
110      <select name="servers" multiple="multiple" size="10" style="width: 25em;">
111      <%
112      String selected = "selected";
113      for (Presets.Preset server : presets)
114      {
115        %>
116        <option <%=selected%>><%=HTML.encodeTags(server.getName())%>
117        <%
118        selected = "";
119      }
120      %>
121      </select>
122      </td>
123      <td>
124        <table width="100">
125        <tr><td><base:button title="Edit&hellip;&nbsp;&nbsp;&nbsp;" image="configure.png" onclick="editServer()" /></td></tr>
126        <tr><td><base:button title="Add&hellip;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;" onclick="addServer()" /></td></tr>
127        <tr><td><base:button title="Remove&hellip;" onclick="removeServer()" /></td></tr>
128        </table>
129      </td>
130    </tr>
131    </table>
132   
133  </t:tab>
134  </t:tabcontrol>
135  <p>
136  <table align="center">
137  <tr>
138    <td><base:button onclick="window.close();" title="Close" /></td>
139  </tr>
140  </table>
141</base:body>
142</base:page>
143<%
144}
145finally
146{
147  if (dc != null) dc.close();
148}
149%>
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