source: extensions/net.sf.basedb.mev/trunk/META-INF/extensions.xml @ 1383

Last change on this file since 1383 was 1383, checked in by Martin Svensson, 10 years ago

Fixes #312 Updates required for BASE 3 support. Downloading the necessary base3-jar files with Ant has not been cause the base3 has not been released yet.

  • Property svn:eol-style set to native
  • Property svn:keywords set to Date Id
File size: 3.4 KB
Line 
1<?xml version="1.0" encoding="UTF-8" ?>
2<extensions xmlns="http://base.thep.lu.se/extensions.xsd">
3  <about>
4    <name>MEV Launcher package</name>
5    <description>
6      This package adds the possibility to launch the MEV
7      application with Java web start and automatically have
8      it import data from the current bioassay set.
9    </description>
10    <version>1.8pre</version>
11    <copyright>BASE development team</copyright>
12    <email>basedb-users@lists.sourceforge.net</email>
13    <url>http://baseplugins.thep.lu.se/wiki/net.sf.basedb.mev</url>
14    <min-base-version>3.0.0</min-base-version>   
15  </about>
16  <plugin-definition id="PackageInstaller">
17    <about>
18      <name>MeV package installer</name>
19      <description>
20        This plug-in will install required data files types, etc. that
21        are required to use the MeV launcher and plug-ins. Start the installation by
22        selecting this plug-in from the list at Administrate -> Plugins -> Definitions.
23        Then click on the 'Run plugin' button.
24      </description>
25    </about>
26    <plugin-class>net.sf.basedb.mev.install.Install</plugin-class>
27  </plugin-definition>
28  <plugin-definition id="CghExporterPlugin">
29    <about>
30      <name>MeV CGH exporter</name>     
31      <description>
32        MeV CGH exporter Comparative Genomic Hybridization exporter for bioassay set data.
33        The resulting file can be opened in MeV for further analysis.
34      </description>
35    </about>   
36    <plugin-class>net.sf.basedb.mev.plugin.CghExporterPlugin</plugin-class>
37  </plugin-definition>
38  <plugin-definition id="TdmsExporterPlugin">
39    <about>
40      <name>MeV TDMS exporter</name>
41      <description>
42        Tab-delimited Multiple Sample exporter for bioassay set data.
43        The resulting file can be opened in MeV for further analysis.
44      </description>     
45    </about>   
46    <plugin-class>net.sf.basedb.mev.plugin.TdmsExporterPlugin</plugin-class>
47  </plugin-definition>
48  <extension
49    id="net.sf.basedb.mev.launchmev"
50    extends="net.sf.basedb.clients.web.bioassayset.list.tools"
51    >
52    <index>1</index>
53    <about>
54      <name>MeV Launcher</name>
55      <description>
56        Adds an action to the "Tools" column that starts MeV using Java
57        web start and automatically loads data from the current bioassay
58        set. The bioassay set must have a MeV TDMS file attached to it.
59      </description>
60    </about>
61    <action-factory>
62      <factory-class>
63        net.sf.basedb.mev.factory.MevButtonFactory
64      </factory-class>
65      <parameters>
66        <title>Start MeV</title>
67        <tooltip>
68          Launch MeV with data from this bioassay set. If
69          you have not yet created any MeV file you will be
70          given the option to do so.
71        </tooltip>
72        <onClick>MeV.launch($ID$)</onClick>
73        <icon>~/images/tm4.png</icon>
74        <script>~/scripts/mev.jsp</script>
75      </parameters>
76    </action-factory>
77  </extension>
78  <extension
79    id="net.sf.basedb.mev.options"
80    extends="net.sf.basedb.clients.web.menu.extensions"
81    >
82    <index>1</index>
83    <about>
84      <name>MeV Launcher options</name>
85      <description>
86        Opens a dialog where a user can specify options for the MeV Launcher
87      </description>
88    </about>
89    <action-factory>
90      <factory-class>
91        net.sf.basedb.clients.web.extensions.menu.FixedMenuItemFactory
92      </factory-class>
93      <parameters>
94        <title>MeV Launcher options&amp;hellip;</title>
95        <tooltip>Specify options for the MeV Launcher</tooltip>
96        <onClick>Main.openPopup('$HOME$/options.jsp?ID='+getSessionId(), 'MeVLauncherOptions', 500, 400)</onClick>
97        <icon>~/images/tm4.png</icon>
98      </parameters>
99    </action-factory>
100  </extension> 
101</extensions>
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