source: extensions/net.sf.basedb.mev/trunk/META-INF/extensions.xml @ 2477

<?xml version="1.0" encoding="UTF-8" ?>
<extensions xmlns="http://base.thep.lu.se/extensions.xsd">
  <about safe-scripts="1">
    <name>MEV Launcher package</name>
    <description>
      This package adds the possibility to launch the MEV 
      application with Java web start and automatically have
      it import data from the current bioassay set.
    </description>
    <version>1.12-dev</version>
    <copyright>BASE development team</copyright>
    <email>basedb-users@lists.sourceforge.net</email>
    <url>http://baseplugins.thep.lu.se/wiki/net.sf.basedb.mev</url>
    <min-base-version>3.3.0</min-base-version>    
  </about>
  <plugin-definition id="PackageInstaller">
    <about>
      <name>MeV package installer</name>
      <description>
        This plug-in will install required data files types, etc. that
        are required to use the MeV launcher and plug-ins. Start the installation by
        selecting this plug-in from the list at Administrate -> Plugins -> Definitions.
        Then click on the 'Run plugin' button.
      </description>
    </about>
    <plugin-class>net.sf.basedb.mev.install.Install</plugin-class>
    <settings>
      <property name="immediate-execution">1</property>
    </settings>
  </plugin-definition>
  <plugin-definition id="CghExporterPlugin">
    <about>
      <name>MeV CGH exporter</name>     
      <description>
        MeV CGH exporter Comparative Genomic Hybridization exporter for bioassay set data. 
        The resulting file can be opened in MeV for further analysis.
      </description>
    </about>    
    <plugin-class>net.sf.basedb.mev.plugin.CghExporterPlugin</plugin-class>
    <settings>
      <property name="everyone-use">1</property>
    </settings>
  </plugin-definition>
  <plugin-definition id="TdmsExporterPlugin">
    <about>
      <name>MeV TDMS exporter</name>
      <description>
        Tab-delimited Multiple Sample exporter for bioassay set data.
        The resulting file can be opened in MeV for further analysis.
      </description>      
    </about>    
    <plugin-class>net.sf.basedb.mev.plugin.TdmsExporterPlugin</plugin-class>
    <settings>
      <property name="everyone-use">1</property>
    </settings>
  </plugin-definition>
  <extension
    id="net.sf.basedb.mev.launchmev"
    extends="net.sf.basedb.clients.web.bioassayset.list.tools"
    >
    <index>1</index>
    <about>
      <name>MeV Launcher</name>
      <description>
        Adds an action to the "Tools" column that starts MeV using Java
        web start and automatically loads data from the current bioassay
        set. The bioassay set must have a MeV TDMS file attached to it.
      </description>
    </about>
    <action-factory>
      <factory-class>
        net.sf.basedb.mev.factory.MevButtonFactory
      </factory-class>
      <parameters>
        <title>Start MeV</title>
        <tooltip>
          Launch MeV with data from this bioassay set. If
          you have not yet created any MeV file you will be
          given the option to do so.
        </tooltip>
        <clazz>icon link auto-init</clazz>
        <data-auto-init>launch-mev</data-auto-init>
        <data-home>$HOME$</data-home>
        <icon>~/images/tm4.png</icon>
        <script>~/scripts/mev.js</script>
      </parameters>
    </action-factory>
  </extension>
  <extension
    id="net.sf.basedb.mev.options"
    extends="net.sf.basedb.clients.web.menu.extensions"
    >
    <index>1</index>
    <about>
      <name>MeV Launcher options</name>
      <description>
        Opens a dialog where a user can specify options for the MeV Launcher
      </description>
    </about>
    <action-factory>
      <factory-class>
        net.sf.basedb.clients.web.extensions.menu.FixedMenuItemFactory
      </factory-class>
      <parameters>
        <title>MeV Launcher options&amp;hellip;</title>
        <tooltip>Specify options for the MeV Launcher</tooltip>
        <data-url>$HOME$/options.jsp?ID=$SESSION-ID$</data-url>
        <data-popup>MeVLauncherOptions, 450, 300</data-popup>
        <icon>~/images/tm4.png</icon>
      </parameters>
    </action-factory>
  </extension>  
</extensions>