source: extensions/net.sf.basedb.mev/trunk/resources/launch_export.jsp @ 1070

<%-- $Id: launch_export.jsp 1070 2009-05-15 09:06:24Z nicklas $
  ------------------------------------------------------------------
  Copyright (C) 2009 Nicklas Nordborg

  This file is part of BASE - BioArray Software Environment.
  Available at http://base.thep.lu.se/

  BASE is free software; you can redistribute it and/or
  modify it under the terms of the GNU General Public License
  as published by the Free Software Foundation; either version 2
  of the License, or (at your option) any later version.

  BASE is distributed in the hope that it will be useful,
  but WITHOUT ANY WARRANTY; without even the implied warranty of
  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
  GNU General Public License for more details.

  You should have received a copy of the GNU General Public License
  along with this program; if not, write to the Free Software
  Foundation, Inc., 59 Temple Place - Suite 330,
  Boston, MA  02111-1307, USA.
  ------------------------------------------------------------------

  @author Jari, Nicklas
--%>
<%@ page 
  pageEncoding="UTF-8"
  session="false"
  import="net.sf.basedb.core.Application"
  import="net.sf.basedb.core.BioAssaySet"
  import="net.sf.basedb.core.Experiment"
  import="net.sf.basedb.core.Directory"
  import="net.sf.basedb.core.User"
  import="net.sf.basedb.core.DbControl"
  import="net.sf.basedb.core.SessionControl"
  import="net.sf.basedb.core.ItemContext"
  import="net.sf.basedb.core.Item"
  import="net.sf.basedb.core.Path"
  import="net.sf.basedb.clients.web.Base"
  import="net.sf.basedb.clients.web.util.HTML"
  import="net.sf.basedb.clients.web.extensions.ExtensionsControl"
  import="net.sf.basedb.util.Values"
%>
<%@ taglib prefix="base" uri="/WEB-INF/base.tld" %>
<%
final SessionControl sc = Base.getExistingSessionControl(request, true);
final String ID = sc.getId();
final int bioAssaySetId = Values.getInt(request.getParameter("bioassayset_id"));
final String title = "Create MeV TDMS file?";
DbControl dc = null;
String defaultPath = "/";
String defaultFileName = "";
String jobName = "Create MeV TDMS file";
try
{
  dc = sc.newDbControl();
  BioAssaySet bas = BioAssaySet.getById(dc, bioAssaySetId);
  ItemContext cc = sc.getCurrentContext(Item.BIOASSAYSET);
  cc.setId(bioAssaySetId);
  defaultFileName = Path.makeSafeFilename(bas.getName() + "-" + bas.getId() + ".tdms.txt", "");
  jobName += " for " + bas.getName();
  try
  {
    Experiment exp = bas.getExperiment();
    Directory dir = exp.getDirectory();
    if (dir == null)
    {
      User user = User.getById(dc, sc.getLoggedInUserId());
      dir = user.getHomeDirectory();
    }
    if (dir != null)
    {
      defaultPath = dir.getPath().toString() + "/";
    }
  }
  catch (Throwable t)
  {}

}
finally
{
  if (dc != null) dc.close();
}
%>
<base:page type="popup" title="<%=title%>">
<base:head>
  <script language="JavaScript">
  function createTDMS()
  {
    var url = getRoot()+'common/plugin/index.jsp?ID='+getSessionId();
    url += '&cmd=NewJob&plugin_class=net.sf.basedb.mev.plugin.TdmsExporterPlugin';
    url += '&item_type=BIOASSAYSET&context_type=ITEM';
    url += '&job_name=' + encodeURIComponent('<%=jobName%>');
    url += '&parameter:saveAs='+encodeURIComponent('<%=HTML.javaScriptEncode(defaultPath+defaultFileName)%>');
    url += '&parameter:attachToBioAssaySet=true';
    Main.openPopup(url, 'CreateTDMSFile2', 740, 540);
    window.close();
  }
  </script>
</base:head>
<base:body>

  <base:note type="question" title="<%=title%>">
  The selected bioassay is not associated with a MeV TDMS file.
  Do you wish to create one with the MeV TDMS exporter plug-in?
  <br><br>
  </base:note>
  <p>
    <table align="center">
    <tr>
      <td width="50%"><base:button onclick="createTDMS()" title="Yes" /></td>
      <td width="50%"><base:button onclick="window.close()" title="No" /></td>
    </tr>
    </table>
  </div>

</base:body>
</base:page>