1 | ---------------------------------------------------------------------- |
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2 | {{{ |
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3 | Copyright (C) 2008 |
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4 | |
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5 | This file is part of Illumina plug-in package for BASE. |
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6 | Available at http://baseplugins.thep.lu.se/ |
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7 | BASE main site: http://base.thep.lu.se/ |
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8 | |
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9 | This is free software; you can redistribute it and/or |
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10 | modify it under the terms of the GNU General Public License |
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11 | as published by the Free Software Foundation; either version 2 |
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12 | of the License, or (at your option) any later version. |
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13 | |
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14 | The software is distributed in the hope that it will be useful, |
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15 | but WITHOUT ANY WARRANTY; without even the implied warranty of |
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16 | MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the |
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17 | GNU General Public License for more details. |
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18 | |
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19 | You should have received a copy of the GNU General Public License |
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20 | along with this program; if not, write to the Free Software |
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21 | Foundation, Inc., 59 Temple Place - Suite 330, |
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22 | Boston, MA 02111-1307, USA. |
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23 | }}} |
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24 | ---------------------------------------------------------------------- |
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25 | |
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26 | == Requirements == |
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27 | |
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28 | 1. BASE 2.7.0 or later. |
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29 | |
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30 | == Introduction == |
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31 | |
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32 | This README file contains general information about the normalization package |
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33 | and specific information about each algorithm used in the plug-ins. Installation |
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34 | instructions can be found in the INSTALL file. |
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35 | |
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36 | == Average normalization == |
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37 | |
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38 | |
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39 | |
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40 | == Cubic spline normalization == |
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41 | |
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42 | |
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43 | |
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44 | == Rank invariant normalization == |
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45 | |
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46 | No plug-in supports this yet |
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47 | |
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